Gekko japonicus (Schlegel's Japanese gecko): 107111059
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Entry
107111059 CDS
T04299
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA processing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107111059 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gja03041
]
107111059 (PRPF38A)
Spliceosome [BR:
gja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
107111059 (PRPF38A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
Motif
Other DBs
NCBI-GeneID:
107111059
NCBI-ProteinID:
XP_015267453
UniProt:
A0ABM1K166
LinkDB
All DBs
Position
Un
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRYTGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKNQNRNGEFELMHVDEFIDQLLHDERVCDIILPRLQKRYVLEEAEQLEPR
ISALEEDMDDVESSEDEEEEDEKMERAPTPDHRRRGYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccggacagtaaaggatgcgcatagcatccacggcactaacccgcaatacctg
gtggagaagattatccgcactcgcatctatgagtccaagtattggaaggaagaatgcttt
ggtctgactgctgaactggttgtggataaagctatggaactgaggtacactggtggagtt
tatggtggaaacatcaagcccacgccattcttatgtttgactctgaagatgttacagata
cagcctgaaaaagacatcattgtggaatttataaagaatgaagatttcaagtatgtgaga
ttgctgggtgcattgtatatgagactaactggcactgccatagactgctacaaatacctt
gaacccttgtacaatgattatcgaaaaataaaaaaccaaaatagaaatggggagtttgaa
ttaatgcacgtggatgagtttattgatcaattgctccacgatgaacgtgtgtgtgatatc
attttacctagactacagaaacggtatgtcctagaagaagctgaacagctggaaccacgc
attagtgcactggaagaagatatggatgatgtggagtctagtgaagacgaggaagaagag
gatgagaagatggaaagggctcccacacctgatcacaggagaagaggctacagggatcta
gacaaaccccggagatctccaactctgcggtataggagaagccgaagcaggtctcccaga
agacgaagtcgatctccaaagagaagaagtccttcaccacggcgggaaaggcaccgtagt
aagagcccaaggcggcatcgaagcagatccagggacagacggcacagatcaagatctaaa
tctccaggacaccatcgtagccacagacatcgcagtcattccaagtctccagaaagatct
aaaaaaagccataagaagagtcgtcggggaaacgaatga
DBGET
integrated database retrieval system
