Gekko japonicus (Schlegel's Japanese gecko): 107111104
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Entry
107111104 CDS
T04299
Symbol
SNTB1
Name
(RefSeq) syntrophin beta 1
KO
K24064
beta-syntrophin
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107111104 (SNTB1)
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Ortholog
Paralog
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Motif
Pfam:
PDZ
PH
PH_17
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
107111104
NCBI-ProteinID:
XP_015267512
LinkDB
All DBs
Position
Un
AA seq
503 aa
AA seq
DB search
MAVAAAGGGGVGGRLLRSGALEVLVRDRWHRVLVNLSDEALVLSSEEGAAAAYNGIGAAA
GSNANGTFCARGAAAAPPAGAHLGATAAACNLSGAGSPESPSGGGGSPKPGLVSGLGGAR
TAFTDLPEQVPEAISNKKRCVKVLKQEMGGLGISIKGGKENKMPILISKIFKGLAADQTQ
ALYVGDAILAVNGTDLRDATHDEAVQALKRAGKEVLLEVKYMREATPYVKKGSPVSEIGW
ETPPPESPRLGNASSDPLSQVSLSIHRDKKTIPLKMCYVTRNMAASDLENRESVLFQVLG
ENEKHWKPVLVVLTEKDLLMYENMPRIKEAWFSPLHSYPLLATRLVHSGPVKSSPQPGTD
VSFATRTGTRQGIETHLFRTETSRDLSLWTRSIVQGCHNAAELTTEIATACTYKNQECRL
TIHYDHGFSLATEPQDGAFSKTIVQFPYEKLKMSSDDGIRMLYLDFGGKESEIQLDLHSC
PKPIVFIIHSFLSAKITRLGLVA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggccggagggggaggcgtcggcgggcggctgctgcggagcggcgcg
ctggaagttttggtgcgcgaccggtggcaccgagtgctggtgaacttgagcgacgaggcg
ctggtgctgagcagcgaggagggggccgccgccgcctacaacggcatcggggcagccgct
ggcagcaacgccaatgggaccttttgcgcccgaggggcagccgctgcgccgcccgcgggc
gcccacttgggcgccaccgccgccgcttgcaacctctccggcgcggggtctcccgaatcc
ccgtcggggggcggcggcagccctaaaccgggcttggtttcggggctcggcggggcgcgc
acggctttcaccgacctgcccgagcaagtccccgaagccatctccaacaagaagcggtgc
gtaaaggtgctgaagcaggagatgggcggcttgggcatcagcatcaaggggggcaaggag
aacaagatgcccatcctcatcagcaagatcttcaaggggctggcggccgaccagacccag
gcgctctatgtcggggatgccatcctggccgtcaacgggactgacctgcgggacgccacc
cacgacgaagccgtgcaggcgctcaagagggcgggcaaggaggtcctgctggaagtaaaa
tacatgcgagaagccaccccttacgtgaagaaaggttctccggtttcagaaattgggtgg
gagactcccccaccagaatccccccggttgggaaatgcgtccagcgatcccctctcgcag
gtttctctctccatccacagagacaagaaaacgatcccgctcaaaatgtgctacgttaca
cggaacatggctgcctctgacctggaaaacagggagtctgttcttttccaggtgctgggg
gagaacgagaagcactggaagcctgtcctggttgtcctgactgagaaggaccttttgatg
tatgagaacatgccccggatcaaggaggcctggttcagccctctgcattcctatcctctg
ctggccaccaggttagtgcattcaggtccggtgaagagctctccgcagcctgggacagat
gtctccttcgccactcgcacaggaacgcggcaagggatcgagacccacctctttaggacg
gagacgagcagggacctgtctctgtggacccgcagcatagttcagggctgccacaatgca
gcggagctgaccacggaaatcgcaaccgcttgtacctacaagaaccaagagtgccgtttg
accatccattatgaccatgggttctctcttgcaactgaaccccaagacggtgccttttcc
aagacaattgtacagtttccttacgagaagctaaaaatgtcctcggacgatgggatccgg
atgctttatctagacttcggaggaaaggaaagtgaaattcaactggatcttcactcttgt
ccaaagccaatcgtgttcatcattcattccttcctttcagccaagattacaagactcggt
ctggtagcatga
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