Gekko japonicus (Schlegel's Japanese gecko): 107111124
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Entry
107111124 CDS
T04299
Symbol
UPF2
Name
(RefSeq) UPF2 regulator of nonsense transcripts homolog (yeast)
KO
K14327
regulator of nonsense transcripts 2
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03013
Nucleocytoplasmic transport
gja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107111124 (UPF2)
03015 mRNA surveillance pathway
107111124 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107111124 (UPF2)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107111124 (UPF2)
mRNA cycle factors
P-body specific factors
107111124 (UPF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
107111124
NCBI-ProteinID:
XP_015267533
UniProt:
A0ABM1K1E6
LinkDB
All DBs
Position
Un
AA seq
1292 aa
AA seq
DB search
MPAERKKSASMDEKETSLGNKDKEFSDRRTVNSRDKPKEDVRLGMKRETLKLPEDKKKKL
EEEKRKKEDKERKKKDEEKVKSEEEQKRKEEEEKQKLEEEEKKKQEEEVKRQQEEAAAQL
REKEEAHQLHQEAWERHQARKELRSKNQNASDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAADKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFALSYQKLLANSQSLADLLD
ENMPDLPQDKPVPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNERCSQNKDTSKDDSRELKEVKDNKDVSASEDLELELENLDINDDPLELECGDEAE
DVAKKLLDEQGKKQGADSTGADNSDGKQASRKQEDEETSTGSHLKLIVDAFLQQLPNCVN
RDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDL
CSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKSDTLHCLKMLLSDFSHHHI
EMACTLLETSGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPA
EKAVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWHDAEVKDYVICCMINIWNVK
YNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYN
YRMVESAVIFRTLYSFTSFGVNPDGTPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKR
KLDCFLVYFQRYVWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKMKLCNSLEESVRQV
QDLEREFLIKLGLVNDKDSKGSMAEGENLEEDEEEEEGGVEIEEQSGNESEINDPEEEEG
SENEDEEEGEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKRVPCAEDEDFIQALDKM
MLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGSGEGESESGDTMPFVMLTRKGNK
QQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMMQSLAQRPA
PANTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgagcgcaagaagtcggcaagcatggatgaaaaagaaacatcattaggtaac
aaagataaggaattcagtgacaggcggacagtgaatagcagagataaacccaaagaggat
gttaggcttggcatgaagagagaaacattaaaactacctgaagataaaaagaaaaagctg
gaagaggagaagcggaaaaaagaagataaggaacgaaagaaaaaagatgaagaaaaagta
aaatctgaagaagagcagaagagaaaggaggaggaggaaaagcagaaacttgaagaggaa
gagaaaaagaaacaagaggaggaagtaaagaggcaacaagaagaggcagctgctcagctg
agagagaaagaagaggcacatcagcttcaccaagaagcatgggagcgtcaccaagcaaga
aaggaactccgaagcaaaaaccagaatgcatcagacaaccggcctgaagaaaacttcttt
agcaggctggattcaagtctcaagaagaacactgcctttgttaagaagttaaaaactatc
acagagcagcagagagactctttatcccatgactttaatggtctcaatttaagcaagtac
attgcagaagctgttgcttctatagtggaagcaaagttgaaaatttcagatgtaaactgt
gctgtgcatctttgttctctgtttcatcagcggtatgctgactttgctccatctcttctt
caagtctggaaaaagcattttgaagcaaggaaagaagagaaaacacccaacattactaaa
ctaagaacagacttgcggttcattgcagaactgacaatagttgggattttcactgacaaa
gaaggcttatctttaatctatgaacaactaaaaaatattattaatgctgatcgggaatcc
cacactcatgtttctgtggtcattagcttttgccggcactgtggagatgacattgctggt
ttggtaccaaggaaagtaaaaagtgcagcagacaaatttaacttgagttttcctcctagt
gaaattattagcccagaaaaacaacagcctttccaaaatctgctgaaagaatacttcaca
tctttgaccaaacatctgaaaagggaccacagggaactacaaaatattgaaagacagaac
aggcgtattctgcactctaaaggggagctgagtgaagaccggcacaaacagtatgaagaa
tttgccctgtcatatcagaagttgctggcaaactctcagtctttagctgatctcctggat
gaaaatatgcctgatcttccccaggacaaacctgtaccagaagaacacgggcctggtatt
gacatttttactcctggcaagcctggtgaatatgacttagaggggggcatctgggaagat
gaagatgctcgaaacttctatgagaatcttattgatttaaaggcatttgtaccagctatc
ctgttcaaggataatgaaagatgttcacagaataaggataccagtaaagatgactctaga
gagttaaaagaagttaaggataacaaagatgtgtctgctagtgaagatttggagctggag
ctggagaatctggatattaatgatgatccccttgagttagagtgtggagatgaggcagaa
gatgttgcaaagaagcttcttgatgagcaaggcaagaaacagggagcagatagcaccgga
gctgacaatagtgacggaaagcaagcttcaagaaagcaagaagatgaagagaccagtact
ggatcacacctgaagctcattgtagatgcttttcttcagcaactcccaaactgtgtaaat
agagacctaatagacaaggcagcaatggacttctgcatgaatatgaacacaaaagccaac
aggagaaagttggttcgggctctcttcattgttccacgacaaaggctggatttgctaccc
ttttatgcaaggctagttgccacgctgcatccctgtatgtctgatgtagcagaggatctc
tgttccatgctgaaaggcgacttcagatttcatgtgagaaagaaggaccagatcaatatt
gaaacaaagaacaagaccgtacgattcattggcgagctgacaaagttcaaaatgttttcc
aaaagtgacactctgcattgtttaaagatgctgctgtctgacttctctcatcaccatatt
gaaatggcgtgcactcttttggaaaccagtgggagattcctctttagatcaccagaatcc
catttaagaactagtgtccttctggaacaaatgatgagaaagaagcaagcgatgcatctt
gatgcacgctacgttacgatggtggaaaatgcctattactactgtaaccctcctccagct
gagaaggcagtgaaaaagaaacgacctcctctccaggagtacattcggaagctgctttac
aaggatctctccaaagtcactactgaaaaggtcctccgacagatgcgcaaattgccctgg
catgatgctgaagtgaaagactatgttatatgttgtatgatcaacatctggaatgtgaaa
tataatagcattcattgtgtagccaaccttttagcaggactggttctttaccaagaagat
gttggtattcatgttgtggatggtgtcctagaggatattcgactaggaatggaggttaat
caaccaaaatttaaccagcggagaatcagcagtgcgaaattcctgggtgagctgtacaat
tacagaatggtggagtcggcagtaatatttcgaactctgtactcattcacatcatttggt
gtgaaccctgatggaactcctagcccacttgatcctccagaacaccttttccgaattaga
ctggtctgtaccatccttgacacttgcgggcaatactttgacagaggatctagcaaacgg
aaactggattgctttttggtctactttcagaggtatgtttggtggaagaaaagcctagac
gtttggacaaaagatcacccatttcctattgacattgactatatgattagtgatacacta
gaactgttgagaccaaagatgaaactctgcaattcgctggaagaatctgttaggcaggta
caagacctggaaagggaattcttaatcaaactaggccttgtgaatgacaaggactctaaa
ggttcaatggcagaaggggagaacctagaggaggatgaggaagaggaagaaggtggagta
gagatagaagaacaatctggaaatgaaagtgaaattaatgacccagaggaggaggagggc
tctgaaaatgaggatgaagaagagggggaagaagaagaagagaatacagattatctcaca
gattcgaataaggaaaatgaaactgatgaagagaatactgaagtaatgatcaagggaggt
ggactgaaacgtgtcccctgtgctgaagatgaggacttcattcaagcactggacaaaatg
atgctggaaaatttacagcaaaggagcggtgagtctgtgaaagtacatcagttagatgtg
gcaattcccctgcatctcaagagccagctaaagaaaggtccaccactaggtagtggggaa
ggagaatcagagtctggtgacacaatgccttttgtcatgctaactcgaaaaggcaataag
caacagttcaagatcctcaatgtgccaatgtcttcccaactggctgcaaaccactggaac
cagcaacaggctgagcaagaagagaggatgagaatgaagaagttgacattggacatcaat
gaacggcaggagcaagaggactaccaggagatgatgcaatccctcgcccaacggccagct
ccagcaaacaccaatcgagaacggaggccacggtatcagcatcccaagggagcacctaat
gctgatctaatctttaaaactggtgggaggagacgctga
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integrated database retrieval system
