Gekko japonicus (Schlegel's Japanese gecko): 107111126
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Entry
107111126 CDS
T04299
Symbol
SHPRH
Name
(RefSeq) SNF2 histone linker PHD RING helicase
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gja04121
]
107111126 (SHPRH)
Enzymes [BR:
gja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107111126 (SHPRH)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107111126 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
TPR_12
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
107111126
NCBI-ProteinID:
XP_015267531
UniProt:
A0ABM1K1E4
LinkDB
All DBs
Position
Un
AA seq
1679 aa
AA seq
DB search
MSNRRKRAAPLQMNDEKKKQLCWNMHDDRKNEVIDLDAVDEDHPVAGTSSSSASLIVIND
DSIDEDLTCKGNNLSSLSFSRITDEVEESCHLLLPLSIQLNIVISPYYPDPSWKVLLGEL
VLQILPEQLLTENFHKKSYTLMRAESSDRLRVCVHAKSIEKMDEREESFPTAYEEDMFVE
SSLSNEMLEDLMWLQKKRLIVLHQRPEDAQCLKVGIYLLERGLSKLEFLNDGGGRIKKAN
QLIQKLMEKFYHFVIPDILEDEEEESDRDIERQNIEELYDYVRHIHQKEVQFLKENVQHP
ALIPVLRQYQSEAVNWMLQRENFRNTPTNENALHYLWREFITLDGQKLYYNPFTGCIICE
RPVAGPQWPGGILADEMGLGKTVEVLALILTHSRKDVKQDALMLPEGFLVNFFIPPQPTE
GGEKKTIKKMELKLKEKVQYPSLRIMLLTAIKEMNVKKGASIFAIFKYVHAVYKYDIQRN
RRILKRMLEKLIAEKVVEQVKGHGLAGSFKLGRNYKEQKFCSRTKKQKVNSNQIQKETLQ
KQKNETKEFKDKDISSVDVLKSPLPAEEHDYCATSKLDPKRWKAEDRPVDLASTVLQCNM
LISKDNECGVTEIPKNSEEVTERKEEPSPVSQGHTSTFVQHPGSIFPFNTPDYRFECICG
ELGLVDYKARVQCLNCHLWQHAECVNYKEENLKIKPFYCPHCLVAMKPVPTGATLIISPS
SICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHILAEQEVVITTYDVLRSELNYVDI
PHSNSEDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECTTAKAAEMALRLSGINRW
CVSGTPVQRGLEDLYGLVLFLGADPYWVKYWWDQLLYRPYCRKKPQPLYSFIAKIMWRSA
KKDVIDQIQIPAQTEDTHWLHFSPVERHFYHRQHEVCCQDALAKFRKISDWSLKLSSLDR
RTVASILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCRTECEEAHRQLV
CALNGLAGIHIIKGEYALAAELYREVLRSSEEHKEKLKTDSLQRLHSTHNLMELLAAKHP
GIPPTLRDGRLQEECEQLRQHYMSKSNAEVAEAHQALQPVVQTIHELQRKIRSNSPWWLD
VTLSAIQYAIDEELVQRVQNDLTSNYKQQTNKLSMADKFRDCRGLQYLLTTQMEEVKKFQ
KLVREAVKNLEGPPSKDVIEAATICHLRPVRLPLNNCVFCKADELFIEYESKLFSHTVKG
QMAIFEEMIEDEEGLVDDRLPTTSRGLWAASETERSLKSILSFAKAHRMDAKIIEEGSIF
LELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPEEPKPNHPVLHIIEPHE
VEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVNPEPCPICARQLGQQWA
VLTCGHCFCNECIAIIIEQYSVGTRRSSIKCAICRQTTSHKEISYVFTAESANQEDDMPV
KGSHSTKVEAVVRTLKKIQFKDPGAKSLVFSTWQDVLDIIAKALYDNNMVFAQINGISKF
QENLSAFKYDPKINILLLPLHTGSNGLNIIEATQVLLVEPILNPAHELQAIGRVHRIGQT
KPTIVHRFLIKATIEERMQTMLKTVERSHSSSSMKQSEASVLTVADLADLFSEETEELE
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccgtcgaaaacgtgctgctcctttgcagatgaatgatgagaaaaagaagcag
ctctgctggaatatgcatgatgaccggaaaaatgaggtgatagatttagacgccgttgat
gaagaccaccctgttgcaggcacaagctcatcttcagcgtcccttattgttataaacgat
gatagcattgatgaagacttgacttgtaaaggaaataatctatcatccttgagtttctca
agaattacagatgaagttgaggaatcttgccatcttttgctgcctttatccatacagcta
aatattgtaatatccccgtattatcctgatccttcttggaaagttttgcttggggagctt
gttcttcaaattcttcctgaacagcttctaacagagaatttccataaaaagagctatacc
ttgatgagagcagaatctagtgatcggctgcgtgtctgtgttcatgcaaagagcattgag
aagatggatgagagagaagagtctttcccaactgcttacgaagaagatatgtttgttgaa
tcatctttaagtaatgaaatgttggaagacttgatgtggttgcaaaagaagaggctgatt
gtgcttcatcaaagacctgaagatgctcagtgtttaaaggttggaatatatcttctagaa
cgtggcttaagcaaactggaattccttaatgatggtggtggcagaataaagaaagccaac
caactcattcagaagctgatggaaaaattctaccactttgtaattccagatatactggaa
gatgaggaggaggagtcagacagagatatagaacggcagaatattgaagagctttatgac
tatgtgaggcacattcaccagaaggaagtacagtttttgaaggagaatgtacagcaccct
gcactgattcctgtattaaggcaatatcaaagtgaggctgtaaactggatgctgcaacgg
gagaatttcagaaatacacctactaatgaaaatgcccttcactacttatggagagagttt
attactttagatggacaaaaactctactataatcctttcactggctgcattatctgtgaa
cgcccagttgcgggacctcagtggcctggaggaatattggcagatgagatgggtcttggg
aaaacagtagaggtattggctcttatcctaacacactctcgcaaagatgttaaacaggat
gctctaatgttacctgagggtttcttggtaaatttcttcattccaccacaacccactgaa
ggaggtgaaaagaaaacaataaagaaaatggaacttaaattgaaggagaaagtacagtat
cctagtttgcgaataatgctcttaacagctataaaagaaatgaatgtaaaaaagggagca
tctatttttgctatttttaagtacgtccatgctgtatacaaatatgacatacaacgaaac
cgtcggatccttaaaagaatgttggaaaagctaattgcagagaaggtagtagaacaggtc
aaaggccatggtcttgcaggctcttttaagttgggcagaaactacaaggaacagaagttt
tgcagtagaaccaagaaacagaaagtaaactcaaatcagatccagaaagaaaccttgcag
aaacagaagaatgaaaccaaagaattcaaagataaggacatatcctctgtagatgttctt
aaatcacctctgccagcagaagaacatgattactgtgcaaccagcaaattggatccaaag
agatggaaagctgaagatagacctgtcgacttagcgtctactgtcttgcaatgcaacatg
cttatttccaaagacaatgaatgtggtgttactgaaattcctaaaaactctgaggaagtt
actgagcggaaagaagaaccatctccagtctcccaaggacacactagcacttttgtacaa
caccctggttccatttttcctttcaacacacctgactaccgctttgaatgcatctgtggg
gagcttggcttagtagactacaaggcacgtgttcagtgcctaaactgtcacctgtggcag
catgctgagtgtgtgaactataaggaagaaaatctgaagatcaagcccttttactgtcct
cattgccttgtagcaatgaaaccagttcccacaggagcgactttgataatctctcctagt
tccatatgtcaccagtgggtcgatgagatcaacaggcatgtaagatcgtcttcccttcga
gtgctggtttatcaaggagtaaagaaacatggtttcctgcagcctcacatcttagcagag
caggaagtagtgattaccacttatgatgtccttcgtagtgagctgaactatgtggacatt
cctcacagcaatagtgaagatggccgccgtttcagaaaccagaagcggtatatggccatt
ccgagccccttggtagcagtggagtggtggcgaatttgtctggatgaagcacaaatggta
gaatgcactacagcaaaggctgcagaaatggctctccgtttgagtggaatcaatcgctgg
tgtgtcagtggcacacctgtgcagcgaggattggaagatctatatggactagtgcttttt
cttggggctgatccttactgggtaaaatattggtgggatcagcttctgtatcgtccttac
tgcaggaaaaaaccccagcctctctacagcttcatagccaagataatgtggaggtcagca
aagaaggacgtgattgaccaaattcagattcctgctcagacagaagatacacactggctt
cacttttctcctgtggagagacacttttatcatcgtcagcatgaggtgtgctgccaggat
gctctggcaaaattcaggaagatttctgattggtccctaaaacttagcagcctggatagg
aggacagttgcttctattttgtaccctttgttacgcctgagacaagcctgctgtcatccg
caagctgttcgtggagaattcttacctctgcagaaaagcacaatgactatggaggagctt
ctaacatcactgcagaaaaaatgtcgaacagaatgtgaggaagctcacaggcaactcgtc
tgtgctctgaatggcttagctggtattcacataattaaaggagaatatgcattggcagct
gaattgtatagagaagtgctgcgttcctctgaagagcacaaagaaaagctcaaaactgat
tcattgcaaaggcttcattcaacacataacctgatggaactcttggcagcaaagcatcct
gggataccccccaccttacgagatggcagacttcaggaagagtgtgaacaacttcgacag
cattacatgagtaaatcaaatgcagaagtagctgaagcccatcaggctttacaaccagtg
gtacagactatccatgaacttcagaggaaaatacgttccaattcaccttggtggttggat
gtgaccctgtcagcaatacagtatgccattgatgaggagcttgttcagcgagtgcaaaat
gatctaaccagcaactataaacagcaaactaataaactctctatggcagacaagttccgt
gactgcagaggccttcagtacctgctcacaactcaaatggaagaagtgaagaaattccag
aaacttgtaagagaggctgtgaaaaatctggaaggtcctccttccaaagatgttattgag
gctgccaccatctgccatctgcggcctgtaaggctgccattaaacaactgtgtcttttgt
aaagctgatgaattgtttatagaatacgagtcgaagttgttctctcacactgtaaaaggc
cagatggcaatttttgaggagatgatagaagatgaagagggactagttgatgaccgctta
cctaccacaagcagaggtctctgggcagcaagtgaaacggagcggtctttgaaatccata
ctgtctttcgccaaagctcaccgaatggatgccaagataattgaagaaggcagcatcttc
ttggaactttttgaagcatggaaaaaggaatataagctgcttcatgaatattggatggtc
ttgagggatcatgtgtctgccattgatgaactcgccatggccacagaacggcttagagtg
cgtcatccagaagagccgaaaccaaaccatcctgttcttcacataattgagccacatgag
gtagaacagaatagagtgaaacttttgaatgataaagctgttgccaaatcacagcttcag
aagaaactgggccagctactgtatctcactaatttagaaaagtctcaggataaaacaact
ggaggagttaatccagagccctgtccaatttgtgcacggcaactgggacaacagtgggca
gtattgacatgtggacactgcttctgtaatgagtgcatagctattattatagaacagtac
agtgtcggcacccgcagaagttcaataaagtgtgccatctgtaggcagacaacatcgcat
aaagaaatatcgtatgtcttcactgcagagtctgcgaaccaagaggatgatatgcctgtg
aagggtagtcattccaccaaagttgaagctgtggtcaggactctgaagaaaatccagttc
aaagatcctggagcaaaatcccttgttttctcaacgtggcaagatgtgctggatattatt
gcgaaagctctatatgataacaacatggtatttgctcagatcaacggaattagcaagttc
caggaaaatctctcagcatttaaatatgatcccaaaatcaacatattgttgttacccctt
catactggttccaatgggttaaatatcattgaagcaactcaggtcctcttggtggaacct
atactgaatccagcacatgagctacaggctattggcagagtgcatcgtatagggcaaaca
aaacccaccattgttcacagattcttaataaaagcaacaatagaagagagaatgcagaca
atgttgaaaactgtagagagaagccattccagttcttccatgaagcagtcagaggcctcc
gtgttaacagtagctgatttggcagaccttttttcagaagaaactgaagaactagaatga
DBGET
integrated database retrieval system
