KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107111195
Entry
107111195         CDS       T04299                                 
Symbol
COPA
Name
(RefSeq) coatomer protein complex subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:gja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gja04131]
    107111195 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gja04147]
    107111195 (COPA)
Membrane trafficking [BR:gja04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    107111195 (COPA)
Exosome [BR:gja04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107111195 (COPA)
  Exosomal proteins of bladder cancer cells
   107111195 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 TPR_COPA_B Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 107111195
NCBI-ProteinID: XP_015267610
UniProt: A0ABM1K1M3
LinkDB
Position
Un
AA seq 1238 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTVSQNLSWGVXPQSGALXXIVIFIVPCDASGSXFLFFSPP
APEGKRSSGLTAVWVARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLL
RDADSITLFDVQQKRTLSSVKISKVKYVIWSADMSHVALLAKHAIMICNRKLDSLCNIHE
NIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECR
PRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEK
TRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFL
YLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHG
LDDEAESLKETFDPEKETIPDIDPDAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKG
KGGALAADIDIDTVGTEGWGEDAELQLDEDGFVDAGEGFGDEAMAKGQEEGGGWEVEEDL
DLPPELDVPAGPAGGAEDGFFVPPTKGTSPAQVWCNNSQLPVDHVLAGSFETSMRLLHDQ
VGVTTFAPYKQLFLQTYARGRTTYQALPSLPSMYGYPHRNWKDAGLKNALPAVGLKLNDL
IQRLQLCYQLTTAGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSM
EVERKKLPKETLEQQKRICEMAAYFTHSSLQPVHMILVLRTALNLFFKLKNFKTAATFAR
RLLELGPKPEVAQQTRKILTACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCP
LSGACYFPEFRGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq 3717 nt   +upstreamnt  +downstreamnt
atgctcaccaagttcgagaccaagtcggctcgcgtgaaagggcttagctttcaccccaag
cggccctggatcctaacaagcctgcacaatggagtgatccagctctgggactatcggatg
tgtactctcatcgacaaatttgatgaacatgatggccctgttagaggtattgattttcac
aagcagcagccactctttgtgtctggaggagatgactacaaaattaaggtctggaattac
aagctgcgtcgttgtctcttcactctgttggggcacctggattacatccgcaccaccttc
ttccaccacgaatatccttggatcttgagtgcatctgatgatcagaccattcgggtttgg
aactggcagtcgagaacttgtgtttgcgtgctgacgggacacaaccattacgtcatgtgc
gcccagttccatccttccgaagacctggtggtatcagccagcttggatcagacagtgcgc
gtttgggatatttctggcctgagaaagaagaacctctctcctggagctgtggagtcagat
gtccgggggatcacgggtgtagacctttttggcacaaccgatgcagtagtgaagcatgtc
ctggagggacacgatcgtggagtcaactgggctgctttccatcccaccatgcctctcata
gtgtcgggagctgacgatcggcaggtcaagatctggaggatgaatgaatcgaaagcttgg
gaagtggacacttgccgtgggcactacaacaacgtctcctgcgccgtgttccatccccgt
caggagctgatcctcagtaattccgaggacaagagcatccgtgtctgggatatgtccaaa
cgcacgggcgtccagactttccgcagggaccacgatcgcttttgggtgttggcagctcac
cccaacctcaacctctttgctgcaggacatgatggtggtatgattgtgttcaagctggaa
cgtgagcggcctgcctacgctgtgcatggcaacatgctctactacgtgaaggaccgcttc
ctccgccagctggacttcaacagctccaaagatgtggccgtgatgcagctgaggagtggc
tccaagttccccgtgttcaacatgtcgtacaacccggctgagaatgccgtcctcctctgc
actgtaagtcaaaatctttcctggggtgtgtagcctcagtctggggctttgtagtgaata
gtgatatttatagttccatgtgatgcctctggctcttgatttctttttttctctcctcca
gctcctgaagggaaacgttcctctgggctgacagctgtgtgggtggctcggaaccgcttt
gcggtcttggatcggatgcactcgattctgatcaagaacctgaaaaacgagatcaccaag
aaggtccaggtccccaactgcgacgagatcttctacgccggcaccgggaacctgctgctg
agggacgcggattccatcactctctttgacgtgcagcagaaacggaccctgtcctctgta
aagatctccaaggtgaagtatgtcatttggtcagctgacatgtcgcacgtggctctcctg
gccaaacacgccatcatgatctgcaacaggaagctggactccctttgcaacatccacgag
aacatccgggtgaagagtggtgcctgggacgagagcggggtcttcatctacacgaccagc
aaccatatcaaatacgccgtcaccactggggatcatgggatcatccgcaccctggacttg
ccgatttatgtgacccgggtgaaggggaacaacgtctactgcctggaccgggagtgccgg
cctcgcgttctgaccatcgaccctactgaattcaagttcaagctggccctcatcaaccgg
aagtatgacgaggtccttcatatggtccgcaatgccaagctcgtgggccagtctatcatt
gcctatctccagaagaagggctacccggaagttgcgctgcattttgtgaaggacgagaag
actcgcttcagcttggctctggaatgtggcaacatagagatcgcactggaggcagccaaa
gccctggatgataagaactgctgggagaagctgggagaagtcgccttgctgcagggcaac
caccagattgtggagatgtgctaccagcgcaccaagaacttcgacaagctctccttcctg
tacctgatcacaggcaacctggagaagctccgcaagatgatgaagatagctgagatccgg
aaggacatgagcggccattaccagaatgccctgtaccttggggatgtagcagagagggtg
aggatcctgaagaactgcgggcagaaatccttggcctatctcacggccgcaacccacggc
ttggatgacgaagccgagagcctgaaagagacctttgacccagaaaaggaaacgattcca
gacatcgaccccgatgccaagttgctgcagccgccagctcccatcatgcctctggacacc
aactggcccctgctcactgtctccaagggtttctttgaaggaacaattgctagcaaaggt
aaaggaggtgcattggcagccgatattgatattgacaccgtgggcactgaaggctgggga
gaagatgctgagctgcagctggacgaagatggctttgtggatgccggggaaggctttgga
gacgaagccatggctaaaggccaagaagaaggtggcggatgggaagttgaagaggacctg
gatctcccacctgagctggatgtccctgctggtcctgcaggaggagcagaggatggcttc
tttgtacctcccaccaaaggcaccagccccgcacaggtttggtgtaacaattcccagctg
ccggtcgatcatgtcctggctggctctttcgagacatccatgaggcttctccacgaccag
gtgggagtgaccaccttcgccccctacaagcagctcttcctgcagacctacgcacggggc
cgcaccacgtaccaggccttgcccagcctgccctccatgtacgggtaccctcaccgcaac
tggaaggatgctgggctaaaaaacgccctcccggcggtcggcctgaagctgaacgacttg
atccagcgcctgcagctgtgctaccagctcaccacagctggcaagtttgaggaagcggtg
gagaagttccgctccattctcttgagcgtgccgctactcgtggtggacaacaagcaagag
atcgcagaggcccagcagctgattgccatctgtcgagaatacattgtggggctgtcgatg
gaagtggagaggaagaaactgcccaaggagacgctggagcagcagaagcgcatctgcgag
atggccgcctatttcacccactccagcctgcagcctgtccacatgatcctggtgctgcgg
accgccctgaacctcttcttcaagctcaagaacttcaagacggcagccacctttgctcgc
cgcctcctggagctcggccccaagcctgaagtagcccagcaaacccgcaaaatcctaacc
gcgtgcgagaagaaccccaccgacgcctaccagctcaactacgacatgcacaaccccttt
gacatctgtgccgcctcctaccggcccatctaccggggcaagccggtggagaagtgcccg
ctcagcggtgcctgttactttcccgagttccgtggtcagatctgcagagtcacaactgta
acggagattggcaaagacgtcatcggcttgaggatcagccctctgcagttccgctga

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