Gekko japonicus (Schlegel's Japanese gecko): 107111332
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Entry
107111332 CDS
T04299
Symbol
COL20A1
Name
(RefSeq) collagen type XX alpha 1 chain
KO
K24357
collagen type XX alpha
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
FN3_Tor_3rd
CBM_4_9
Il13Ra_Ig
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
107111332
NCBI-ProteinID:
XP_015267782
LinkDB
All DBs
Position
Un
AA seq
1007 aa
AA seq
DB search
MSGSNRLKLTVLSEDRLQMKWKETEGNTNGYKVRVKPMAGDSEQEVMLKTKSAKATVGGL
SPTKEYTLQIYILNGSQEALFVKRRFVIEELKNFSQVRSNRKNPTSAPEKAETFLGTTAA
DETLIIPNFQCDSSATTDIILLVDGSWSIGRNNFRLIREFLAALVAPFNVAEDKIRVGLS
QYSSDPRTEWDLKTYTTREEVLGALRSLQYKGGNTFTGLALTHVLEQNLKPEAGARSEAP
KLIILLTDGKSQDDAGPSAQTLKNMGIEIFAVGVKNADEAELRQVASEPLELTVYNVLDF
PLLSSLVGRLTRVLCAWIKEKNKEENTGDPVKTAPVNGGAHLSPSNLVVKEVTAGSMHLI
WKPPLVPPKKYRVVYYPSRGGIPKEVVLDGSASSAQLFNLTSHTEYLVSVFPIYENAVGD
GLRGITSTLPLSAPRSLRASEISHNSIKLTWQPADGATQYLVLCSSAPNGANDHTKEVKV
MKTEVLIGGLSPSTEYSLAVYAMYGEDASDPASIQETTLALSPPPRLSFSDVSHGSVRVN
WEATLRAVKTHRVTYMSSRGSNTGELEVPGNVSSAVLKPLSSLTKYFVSVTSIYDEGESF
PVTGNVTTLKVPPPSHLKATELSGSEIRLEWEAIAASDVVVYQIKWNMLGEGRSQELSVA
GNLAATVLPGLKKNTEYQISIWAYYKDGARSDTVSIRHKITTKNPPANLFVDSETPNSLQ
VHWSPPEGAVQHYRLTYTPELGQKHQEMIMLSGKSRTITLHSLLPGTVYTVTVSAVYATG
ESDPISTTGQTASALARLPTSRGSAPFRTDDCPPLDSSEGALQGFDLMEAFGLQEKEYAS
IKGVAMEPYIFLGTHTYTLYRDIQLTRQTSEVFPSGIPSEYTITFLLRLLPESPRESFAV
WQVTDEDFQPLLGIVLDPNKKSLTYFRRDSDADVEEAAFDQPDVKKVFHGSFHKVHVSVS
RSRVKLYIDCKKTAEKPLGASEKVLTTGFVMLGKLTRTRGPRSGSAA
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatcaaaccggttgaagctgacggtcctgtcagaagacagactgcagatgaag
tggaaagagacggaagggaacaccaacgggtacaaagtccgtgtgaagcctatggcaggc
gattccgaacaggaggtcatgctcaaaaccaagagtgcgaaagcgacggtgggagggttg
agccccaccaaagagtacactctgcagatctacatcctgaatggctctcaagaggccctc
tttgtcaagaggcgatttgtgattgaagagctaaaaaacttctcccaagttagaagtaac
agaaagaacccgacgagtgcccctgagaaggcagagacgttcctggggaccacagctgct
gatgaaactctgataattccaaacttccagtgcgactcctctgcgacgaccgatatcatc
cttctggtggacggctcctggagcatcggccgcaacaatttcaggctcatccgagaattc
ctggctgcgctggtggcgccgttcaacgttgctgaggacaagatcagagtcggcttatcc
caatacagcagtgatccgcgcactgaatgggacctgaaaacgtacaccacccgggaagag
gtgttaggtgcattgaggagcttgcagtacaaaggaggaaacactttcacaggactcgca
ttgacccacgtcttggaacagaacctgaagcccgaagctggagctcggtccgaggctccc
aaactgatcatcctcttgaccgacggcaaatcgcaggacgacgccggcccctctgcacaa
accttgaagaatatgggaattgagatctttgccgttggagtgaaaaacgccgacgaggca
gaattgcgccaggtggcctctgagcctttggagctgacggtgtacaacgtcctggacttc
ccactgctcagttctctggttggccggctgacacgagtcttgtgtgcatggattaaggag
aagaacaaggaggagaacacaggcgatccagtcaaaactgctccggtgaatggcggtgcc
catctgagcccatccaacctggtggtaaaagaggtgactgccggaagcatgcacctcatc
tggaagcctccactggtaccacccaagaagtacagggtggtctactacccatccaggggt
gggatccccaaagaggtggttctagatggctctgcttcctccgcgcagctcttcaacctc
acatcccacaccgaatatctggtttcggtatttcccatttatgagaatgcggtcggagat
ggactccgaggtatcacctcaaccttgcctctgtctgctccccgttccctccgagcatcg
gaaatcagccacaacagcataaaactgacctggcagccagcagatggcgctacacagtat
ctggtcctttgttcttcagcacccaacggagcaaatgaccacactaaagaggtgaaagtc
atgaagactgaagttctgattgggggcttgtcccccagcactgaatactcgctggctgtg
tatgcgatgtacggagaagatgctagtgaccctgcaagcatccaggaaaccacactggcc
ctgagccctccgccccgcctgagtttctcagacgtcagccatggttcagtccgggtcaac
tgggaggcgacgttgcgagcggtgaagactcaccgggtgacatatatgtccagcaggggg
agcaacaccggggagttggaggttcccggcaacgtttcgtccgctgtgctgaagcctctg
tcgtcgctgacaaaatattttgtcagcgtgacttccatttacgacgaaggtgaatccttt
ccagttacgggcaacgttacgacattaaaggtgccgccaccgagccacctgaaagccacg
gagctctcgggaagcgagatccggctggagtgggaagcgatcgcggcgtcggacgtggtt
gtctaccagatcaaatggaacatgctcggtgaagggcggtcgcaggagctctctgttgct
ggaaacttggccgccactgttctgcctggcctgaaaaagaacaccgaataccagatatcg
atttgggcgtattacaaggacggggctcggagtgatacagtctctattcggcacaagatc
accaccaagaatccgcctgcaaatctttttgtggattcggagactcccaacagcctgcaa
gtccactggagtcctccagagggtgctgtgcaacactacagactcacctacacccccgaa
ctgggccagaagcaccaggagatgataatgctgtcgggtaaaagccggaccatcacactt
cactcactccttcctggtacagtgtacacagtgacagtttctgcagtctatgccacagga
gagagtgatcccatctctacaactggccagacagcctcagccttggccaggttgcccact
tcaagaggatcggccccattcagaactgacgactgccctcccctcgactcctctgaaggc
gccctacaagggtttgacctgatggaggcatttggactccaggaaaaagagtatgcctcc
attaaaggggtggctatggagccgtacatcttcctcggaactcacacttatacgctctac
agagacatccagctgacccgtcaaacaagtgaagtgtttccttctgggatcccaagcgaa
tacaccatcactttcctgctccgacttctgccagagagccccagggaatcctttgccgtg
tggcaggtgacggatgaagacttccagccgcttcttggcattgtacttgaccccaacaag
aaatccttgacctacttcaggcgtgactccgatgctgatgtagaagaagccgcctttgac
caaccggatgtgaagaaggttttccacgggagcttccataaggtgcacgtatccgtgagc
cgttccagggtcaagctgtatatcgactgcaagaaaacagccgagaagccactcggagca
tcggagaaagtcttgaccacgggctttgtcatgctggggaagctgacgaggacacgagga
ccgcggagtggatcggcagcg
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