Gekko japonicus (Schlegel's Japanese gecko): 107111602
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Entry
107111602 CDS
T04299
Symbol
XAB2
Name
(RefSeq) XPA binding protein 2
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107111602 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107111602 (XAB2)
03041 Spliceosome [BR:
gja03041
]
107111602 (XAB2)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107111602 (XAB2)
Spliceosome [BR:
gja03041
]
Complex B
Other components
Prp19-related factors
107111602 (XAB2)
Complex C
107111602 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_2
TPR_12
Suf
TPR_19
TPR_8
TPR_15
ARM_TT21_C
ARM_TT21
RPN7
TPR_16
TPR_1
NRDE-2
CKAP2_C
LTN1_E3_ligase_6th
ATG1-like_MIT2
Motif
Other DBs
NCBI-GeneID:
107111602
NCBI-ProteinID:
XP_015268071
LinkDB
All DBs
Position
Un
AA seq
853 aa
AA seq
DB search
MPELETVLGKRELFFEEEDLQYEEEILRNPFSVKCWIRYIEFKQNSPKHVLNLIYERALK
ELPGSYKLWYNYLKQRRKQVKSRCVTDPSYEEVNNCHERALVFMHKMPRIWLDYCQFLMD
QCLITRTRRTFDRALRALPITQHHRIWPLYLKFVRLYPLPETAVRVYRRYLKLSPENAEE
YIEYLHSIDRLDEAAVRLAAVVNNECFLSKEGKSNYQLWHELCDLISQNPDKVKSLDVGA
IIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVMTVRDFTQVFDSYAQF
EESMIAAKMETQSEMGREEEDDVDLELRLARFEQLITRRPLLLNSVLLRQNPHNVHEWHK
RVKLYEGKPREIINTYTEAVQTVDPFKATGKTQTLWVAFAKFYEVNGQIEDARTIFEKAS
KVNFKQVDELASVWCEYGEMELRHEDYDQALRILRKATAIPAKKAEYFDSSEPVQNRVYK
SLKVWSMLADLEESLGTFKSTKAVYDRILDLRIATPQIIINYGLFLEEHNYFEESFKAYE
RGISLFKWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPQKYAKTIYLLYAKL
EEEYGLARHAMAVYERATQAVQPSEQYDMYNIYIKRAAEIYGVTHTRSIYEKAIEVLSDE
HAREMCLRFADMECKLGEIDRARAIYSYCSQICDPRTTANFWQTWKEFEIRHGNEDTIRE
MLRIKRSVQATYNTQVNFMASQMLKVYSNATGTVSDLAPGQSGMDDMKLLEQRAEQLAVE
AERDQPRAKEKILFVRSDASRSELAELSRQANPDEIDIDMDEDGNESEDNEPDEVQLEQQ
SVPSAVFGGLKDD
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctggaaacggtgttggggaagcgagagcttttctttgaggaagaagacctg
cagtatgaggaagaaatcttgcggaatcccttctctgtcaagtgctggatccgctacatt
gaattcaagcagaattctcccaagcatgtcctgaacctgatctatgagagagctcttaaa
gagttgccaggcagctacaagctatggtataactatcttaagcaacggcggaaacaggtg
aaaagcagatgtgtcacagaccccagctatgaagaggtgaacaactgtcatgagcgggcc
ctggtcttcatgcataagatgcctcggatatggctagattattgccagtttctcatggac
cagtgtctaattacccgcacacgcaggacctttgatcgggcactccgggctttgcccatt
acacaacaccatcgcatctggccactttacttgaagtttgtgcgtttgtatccattacct
gagacagctgtacgagtctaccgtagatacctgaagctgagcccagagaatgctgaggaa
tatattgagtacctgcactccattgaccggctggatgaggctgctgtccgccttgctgct
gtagttaataatgaatgctttctctctaaggaggggaaatccaactatcagctgtggcat
gagctgtgtgacctcatctcgcagaatccggacaaggtcaagtctcttgacgtgggggcc
attatccggggtggcctgacccgcttcacagaccagctgggcaagctgtggtgttccctg
gcagactattacatccgcagtgggcattttgagaaggctcgagatgtgtatgaagaagca
atacagacagtgatgacggtgcgagatttcactcaggtgtttgacagctatgcccagttc
gaagagagtatgatcgccgctaagatggagacacagtctgagatgggccgtgaggaggaa
gatgatgtggacttggaactgcgcctggctcgttttgagcagctgatcacacgccggccc
ctgcttctcaacagtgtcttgctgcgccagaatcctcacaacgttcatgagtggcacaag
cgggtgaagctgtatgaaggcaaaccccgagagatcatcaacacttacacagaagctgtg
cagactgttgatccttttaaagccactggaaagactcagaccctgtgggttgcttttgcc
aagttctacgaagttaatgggcaaatagaagatgcccggaccatttttgaaaaagccagc
aaggtgaatttcaagcaagtggatgagctggccagcgtgtggtgtgagtatggtgagatg
gagctacgacatgaggactatgaccaggctctgcgcattctgcggaaagccacagctatc
ccggctaagaaggcagagtattttgattcctcagaacctgtgcagaaccgtgtgtacaag
tccctcaaagtttggtccatgctggctgatctggaggagagtctggggaccttcaagtct
actaaagctgtgtatgaccgcattttggacctgcgcatcgccacccctcaaatcatcatt
aactatggtctgttcctggaagagcacaattactttgaagagagcttcaaggcatatgag
aggggcatctccttgttcaagtggccaaatgtgtatgacatctggaacacctacctaacc
aagttcattgaccgctatggtggcaagaagctggagcgtgctcgggacctctttgaacag
gcactggatggctgtcctcagaaatatgctaagactatctacctgttgtacgccaagttg
gaggaagagtatgggctggcacgtcatgccatggcagtgtatgagagagccactcaggct
gtgcagccctcagaacagtatgatatgtacaacatctacatcaagagggcggctgaaatc
tatggggtcacacacactcgtagcatctatgagaaggccattgaggttctgtcagatgag
catgcccgggaaatgtgcctccggtttgcagacatggagtgcaagcttggcgaaatagac
cgagctcgtgcgatctactcatactgctcacagatatgtgatccccgaaccactgccaac
ttctggcagacatggaaggagtttgaaatccggcatgggaatgaagacactataagagaa
atgctgcgcattaaacgaagtgtgcaggctacctacaatacccaagtcaactttatggct
tcccagatgttgaaggtttacagcaatgctaccggcactgtatctgacttagcacctgga
cagagcggcatggatgacatgaagttgttggaacagcgagcagagcagcttgcagttgaa
gcagagcgagatcagcctcgagctaaggagaagatcctgtttgtcaggagtgatgcttcc
cgtagtgagttggctgaactctcccggcaggccaaccctgatgagatagatatagacatg
gatgaagatggcaatgagagtgaggataatgaacctgatgaggttcagctggagcagcag
agtgtcccttccgctgtgtttggaggccttaaggatgactga
DBGET
integrated database retrieval system
