Gekko japonicus (Schlegel's Japanese gecko): 107111660
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Entry
107111660 CDS
T04299
Symbol
PTCH1
Name
(RefSeq) patched 1
KO
K06225
patched 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107111660 (PTCH1)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
107111660
NCBI-ProteinID:
XP_015268151
LinkDB
All DBs
Position
Un
AA seq
1445 aa
AA seq
DB search
MASAVSASEPENSGGGGGEGGGCREPDRPGRSGSRRRRGTGGNRRVTPPDLEYLQRPSYC
DAGFALEQIAKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGL
RAANLETNVEELWVEVGGRVSRELSYTRQKIGEEAMFNPQLMIQTPQEDGANVLTTEALR
QHLDSALQASRVHVYMYNRQWKLEHLCHKSGELITEAGYMDKIIEHLYPCLIITPLDCFW
DGAKLQSGTAYLPGKLPLQWTNFDPLEFLEELKKINSQVDTWEEMLNKAEVGHGYMDRPC
LNPEDPDCPTTAPNKNSTKPLDVALVLGGGCYGLSKKYMHWQEELIIGGTVKNGTGKLVS
AQALQTMFQLMTPKQMYEHFKGYDYVSHINWNEDKAAAILEAWQRMYVEVVHQSVAQNST
QKVLSFTTTTLEDILKSFSDVSIIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLL
VALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDR
TGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAIL
SMDLYRREDRRLDIFCCFTSPCVSRVIQIEPQAYTDTGDNTRYSPPPPYSSHSFAHETQI
TMQSTVQLRTEYDPHTQVYYTTAEPRSEISVQPVTVTQDNLSCQSPESASSTRDLLSQYS
GSTLHCLEPACTKWTLSSFAEKHYAPFLLKPKAKIIVIFLFLGLLGLSLYGTTCVRDGLD
LTDIVPRETREYDFIAAQFKYFSFYHMYIVTQKADYPNIQHLLYELHKRFSNVTYVLLEE
DKQLPKMWLHYFRDWLQGLQDAFDCDWEAGKITYNSYKNGSDDAVLAYKLLVQTGNREKP
IDISQLTKQRLVDADGIINPNAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYM
PETRLRIPEAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRAICNNYTSLGVPSYPNGYPFL
FWEQYIGLRHWLLLSISVVLACTFLVCALFLLNPWTAGIIVMVLALMTVELFGMMGLIGI
KLSAVPVVILIASVGIGVEFTVHIALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLG
VLMLAGSEFDFIVRYFFAVLAILTILGALNGLVLLPVLLSFFGPYPEISPADGRSRLPTP
SSEPPPSIVRFAIPPGQAQNGSDSSDSEYSSQTTVSGISEELHQYEATQRSGAPVHHVIV
EATENPVFARSSVVQPETRYHQTSPRLQMYREPGYQQMWHQNKHPKREGLRPPPYRPRRD
AFETPTDGHSCPSNRDCSSHRGRSQNIKSPVFTTMGTSVPVYCQPITTVTASASVTVAVH
PAVHSHNTHAGGFPSYEGYHDTDHGQFEDPHVPFNVRCERRNSKVEVIELQDVECEERMR
GNSSD
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagctgttagtgcctccgagccggagaacagcggcggcggcggcggcgaagga
ggcggctgtagagagccagatcggccgggcagaagcggcagcaggaggcggagagggacc
ggcgggaacagacgcgtcacgccgcccgatctggaatatctgcagcgccccagctactgc
gacgcagggttcgccttggagcagatagcaaagggaaaggctactggaagaaaagcacca
ctgtggctaagagcaaagtttcaaagactgttgtttaaactgggctgttacattcaaaaa
aactgcgggaaatttttggtggttggccttctgatattcggggcttttgctgtgggatta
agagcagctaatctcgaaaccaatgtggaggagctctgggtagaagttggtggacgagtg
agtcgggagttaagttacacgcgccagaagattggagaagaggctatgtttaatccccaa
ctcatgattcagacaccacaagaagatggtgctaatgtactaacaacagaagcactcaga
cagcaccttgattctgcacttcaagccagcagggtacatgtgtatatgtacaacaggcaa
tggaaattggaacacttatgtcataaatcaggggaacttatcacagaagctggttatatg
gacaagatcatagaacatctttatccttgtttaattatcacacctttggactgcttctgg
gatggtgcaaagttacagtcagggactgcatatcttccaggaaaactccctttgcagtgg
accaactttgaccctttggaattcttagaagagttaaagaaaataaactcccaggtagat
acctgggaagaaatgctgaacaaggctgaggttggtcatgggtatatggaccggccttgc
ctgaatcctgaagatcctgactgtcctaccacagcccctaacaaaaattcaaccaaacct
cttgatgtggcccttgttttaggtggaggatgctatgggttgtccaaaaaatacatgcat
tggcaggaagaactgattattggtggtacggttaaaaatggtactgggaaacttgtcagt
gcccaggctttacaaaccatgtttcagttaatgactcctaagcaaatgtatgaacacttc
aagggctatgactatgtttcacatatcaactggaatgaagacaaagcagctgcaattttg
gaagcctggcagaggatgtatgttgaggttgttcatcagagtgttgcacaaaactctact
cagaaggtgctttcctttactacaactactctggaggacatcctaaagtcattttctgat
gtcagcattatcagagttgccagtggctacctattaatgcttgcctatgcctgtttaacc
atgttgcggtgggattgtgctaagtcccagggtgccgtggggctggcaggagtcttgttg
gttgcactctcagtagctgcaggattgggtctgtgctcattgattgggatttcctttaat
gctgccacaactcaggttttaccctttcttgctctaggagttggtgttgatgatgtcttt
cttttggcacatgcatttagtgaaactgggcagaacaagagaattccatttgaggacaga
acaggagaatgcttgaaacgcactggggcaagtgttgcccttacatccatcagcaatgtt
actgctttcttcatggctgccttaattccaattcctgctctacgggcattttcactccaa
gctgctgtagtggtggtattcaattttgccatggtcctgttaattttccctgctattttg
agtatggatctatatcgtcgtgaagatcggagactggatatattctgctgctttacaagt
ccatgtgtcagcagagtgattcagattgagcctcaagcatacacggacaccggtgacaac
acacgctacagccctccaccaccctacagcagccacagctttgcgcatgaaactcagatc
acaatgcagtccacagtccagctgcgcactgaatatgatcctcatacccaggtttattat
accacagcagaacctcgctcggaaatatcagtgcagcctgtcacagtgacacaagataac
ctcagctgccaaagtccagaaagcgcaagctcaaccagggatctcctttcccagtattca
ggctctacactgcattgtcttgagccagcctgcacaaaatggacactctcctcttttgca
gaaaagcactatgctccattcctattaaaaccaaaagctaagatcatagtcatttttctt
tttctgggcttgcttgggctcagtctttatggaactacctgtgtgagggatggacttgat
cttacggacatagtaccacgggaaactcgggaatatgacttcattgctgcccagttcaag
tatttctcattctaccacatgtacatagttacccagaaagcggattatcctaacatccaa
cacttactttatgaacttcacaaaaggtttagcaacgtgacatatgttttgttggaagag
gacaagcaacttccgaaaatgtggctgcactacttcagagactggttgcaaggacttcag
gatgcttttgactgtgactgggaagctgggaagatcacatacaacagctacaaaaatgga
tcagatgatgctgttctagcttataaacttctggttcaaacaggcaaccgtgaaaaaccc
attgatattagccagttgactaaacaacgtctggtggatgcagatggaatcattaaccca
aatgccttctacatctacctgacagcctgggttagcaatgaccctgtggcctacgctgcc
tctcaagccaacatccggccccaccgtccagaatgggtccatgacaaagcagactatatg
ccagaaaccaggttgagaattccagaagctgagccaatagagtacgctcagtttcctttc
tacctcaatggactgcgtgatacttctgactttgtggaagctattgagaaagtgagagca
atctgcaataactacaccagccttggagtgcccagctacccaaatggatatccattcctt
ttttgggaacaatacattggccttcgtcactggctcctcttgtccattagtgtggttctg
gcttgcacgtttctggtgtgtgccctcttccttctgaacccgtggactgctgggatcatt
gtcatggtgctggctctgatgactgtggaactcttcggcatgatgggtttaattgggatc
aagctgagtgcagtacctgtagtcatccttattgcttctgttggcattggagtggagttc
acagtccatattgccttggcatttctgaccgcaataggagacaagaatcgcagggctgtc
cttgcattagagcatatgtttgcacctgtgctggatggagctgtgtctactctgcttggt
gtattaatgcttgcaggatctgagtttgattttattgtcaggtatttctttgctgtcttg
gcgattttaaccatcttgggtgctttgaatggactggtactacttccagtacttctttcc
ttctttggaccatatcctgagatttctccagcagatggaagaagcaggttacctacacct
tcttctgagcctcccccaagcattgtgagattcgccataccaccaggccaggctcagaat
ggatcagattcttctgattctgaatacagttctcagaccacagtgtcaggaatcagtgaa
gagctccatcagtatgaggccacacaaaggtctggcgcacctgttcaccacgtaattgtt
gaagcaaccgaaaaccctgtctttgccagatcctctgtggtccaaccagagacaaggtat
catcagacaagtccaagattacagatgtatcgagagcctggataccagcaaatgtggcat
caaaataagcatcccaaaagggaaggcctccggccaccgccttatcggccacgcagggat
gcttttgaaacccctactgatgggcattcttgtcctagtaacagggactgctctagccat
agaggtcgttctcagaatatcaaaagcccagtcttcactaccatgggcacttcagtgcca
gtgtactgccagcctatcacaactgtgactgcctcagcttcagttactgttgctgtacac
cctgctgtgcacagccacaatactcatgcaggaggctttccatcctacgagggatatcat
gacactgaccatggacaatttgaggaccctcatgtgccttttaatgtccggtgtgagagg
aggaactctaaagtagaagtaatagaactgcaagatgttgaatgtgaagaaaggatgcgt
ggcaacagctcggattaa
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integrated database retrieval system
