Gekko japonicus (Schlegel's Japanese gecko): 107111681
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Entry
107111681 CDS
T04299
Symbol
HBS1L
Name
(RefSeq) HBS1 like translational GTPase
KO
K14416
elongation factor 1 alpha-like protein
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107111681 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107111681 (HBS1L)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107111681 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
CPL
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
107111681
NCBI-ProteinID:
XP_015268211
LinkDB
All DBs
Position
Un
AA seq
684 aa
AA seq
DB search
MARHRNVRGYNYDEDFEEDDVYGQSVEDDYCISPSTAAQFIYSRRDNPPFAETEEYGYKD
TEHSNYSVSSHQLTEVEKVQLDSCLDHMRELLGESVPEKVMVEAVLNSKFDVQQALDSVL
AQLSKQDTKIKNEDTVISGKATKGKNRDSQTTRIESDVVPKVTKMTVSGKKQSTGFEVPG
VNAEENGHNALTPQKGISAGDGSANLGITEVPSKPALSSQTVQALEEQTSAPTPMKKSGK
AKQQIDVKAELEKRQGGKHWLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESK
KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETQTKVITLMDAPGHKDFIPNMITGAA
QADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWKQERFLE
IVVKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRSQSSELTKWYEGKCLLEQIDSFKPP
QRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYVQVGDRLLAMPPNETCTVKGIALHDEP
VDWAAAGDHISLTLTGMDIIKIKVGCVFCCPKEPIKVCMRFRARLLIFNIEIPITKGFPV
LLHYQTVSEPATIRRLLSVLHKSTGEVTKKKPKCLVKGQNALIELETQRPIALELYKDFK
ELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcacaggaacgtgcgcggctataactacgacgaagacttcgaagaagatgat
gtctatggacagtctgtagaggatgattattgtatttcaccttcaacagctgctcagttt
atctattcaagacgagataatccaccatttgctgaaacagaagaatatggctacaaagat
accgaacatagcaattacagtgtctctagtcatcagctaacagaagttgaaaaagttcag
cttgattcatgccttgaccacatgagggaattacttggggagtctgtgccagagaaggtg
atggtggaagcagtactgaacagcaaatttgatgtgcagcaggctttggattctgtgctt
gcacaacttagcaagcaagatacgaagatcaagaatgaagatactgtaatttcaggaaag
gcaacaaaaggaaaaaacagagattcccagacaaccagaattgaatctgatgttgtgcca
aaagttaccaaaatgactgtgtctggaaagaaacaatctactggctttgaagttccaggt
gtgaatgctgaggagaatgggcataatgctcttacgccacaaaaaggaatctcagctgga
gatggcagtgccaatttggggattactgaggttccatccaaaccagcactttcatctcag
actgttcaagcattagaagaacagacttcagctccgactccaatgaaaaagtctggaaaa
gcaaagcaacaaatagatgtgaaagctgagctggaaaagagacaaggaggaaagcactgg
cttaaccttgtggtaataggacatgttgatgcaggaaaaagtactctaatgggtcattta
ctctatcttctgggcaacgtcaacaagcgaactatgcacaaatatgagcaggaatccaag
aaagctggaaaggcatcatttgcttatgcttgggttttagatgagacaggggaagagaga
gagaggggggtgacaatggatgttggtatgaccaaatttgagacacaaacaaaggtaatt
acattgatggatgctcctggccataaagacttcattccaaacatgataacaggagctgca
caggctgatgtagctatactagttgtggatgccagcagaggagagtttgaagcagggttt
gaaaccggtggacagacacgagaacatggactattagttcgatcacttggggtaacacag
ctggcagttgcggtcaataaaatggatcaggtgaactggaaacaggagagatttctggaa
attgttgttaaacttgggcagttccttaagcaagctggctttaaggaatcagatgtagct
tacatccctaccagtgggcttggtggtgaaaatctagttacaagaagtcagtcaagtgag
ctgaccaaatggtatgaaggaaaatgcctgctagaacagattgattctttcaagccaccc
caaagatcagtggataaaccattcagattatgtgtatcagatgtttttaaagatcaagga
tcaggattttgtgtgactggtaaaatagaagcaggctatgtccaggttggagatcgactg
ctagcaatgcctcctaatgaaacatgcactgtgaaaggaattgccctgcacgatgaacca
gtggattgggctgcagcaggagatcacattagtctcactctgactggcatggatatcatc
aaaatcaaggttggctgtgtattttgttgtcccaaggaacctattaaagtctgtatgcgc
ttcagagcacgactcctcatcttcaatattgagattcccatcaccaaaggattccctgtg
cttttacattatcaaactgtaagtgagcctgccactattagaaggttattgagtgtgctt
cacaagagtacaggtgaagtcacaaagaaaaaacctaagtgtctggttaaaggacagaat
gctctaatagaattggagacacaaagacccatagctttagaactttataaagactttaaa
gaacttggaagatttatgttacgctacagtggatctaccatagcagcaggagttgtcaca
gagattaaagagtga
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