Gekko japonicus (Schlegel's Japanese gecko): 107112252
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Entry
107112252 CDS
T04299
Symbol
TRMT13
Name
(RefSeq) tRNA methyltransferase 13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gja03016
]
107112252 (TRMT13)
Enzymes [BR:
gja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
107112252 (TRMT13)
Transfer RNA biogenesis [BR:
gja03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107112252 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
MnmE_helical
Motif
Other DBs
NCBI-GeneID:
107112252
NCBI-ProteinID:
XP_015268842
UniProt:
A0ABM1K555
LinkDB
All DBs
Position
Un
AA seq
475 aa
AA seq
DB search
MAEEPAASVSPQPGRCAYFVERKRRFCKMVPARGRRFCGEHAAQEEENGRRRIPCPLDSK
HTVYEDQLQKHLKKCNSREKPKPVYFAKDINAGSKEANKLPEEKQVSISALSKEELEDLI
RKLKRASNGIKSVLKDQICSHQALQEALSDPRNGDAAFKHLKQQASILGNMERLNLLGPR
RCFVEFGAGRGKLSHWVDRALQDAKDVHFLLVERATTRFKVDGKHRRNSFERLQVDIQHL
CLSKVPVLVKEKLPVVGIGKHVCGSATDLALRCLAESYANLCDDDGRESPTAKRWKSSGT
DGPPNNSPSEMCSKSSVENWSPVAGIAIALCCHHRCDWKHYVGQEFFTAVGLGVTEFDYF
KRMTSWATCGMRESGPQTSTIEVESKEQGSEAEEQDPHDRSVECSSDSLQGLLTTEERKQ
IGHLCKLLIDHGRIEYLQQRGYDAVLQYYTDPSVSLENVLLTAVPRQFSLPYSVS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagccggcggcgtccgtttcccctcagcctgggcgatgcgcttatttcgtg
gagcggaagaggcgcttctgcaagatggtcccggcgcgcggaaggcgcttttgtggggaa
cacgcagcccaggaggaagaaaatggcaggaggagaattccttgccctctggattcaaaa
cacacagtatatgaagatcagctacaaaaacatttgaaaaaatgtaattcaagagagaag
ccaaagcctgtctactttgctaaagatattaatgcgggatcaaaagaggctaacaaattg
cctgaggaaaagcaggtttcaatttctgctctctctaaagaagagttagaggacttaatt
agaaagctgaaaagagcaagtaatggtataaagtctgttcttaaagaccaaatctgttct
catcaggccttacaggaagccttaagtgaccccagaaacggagatgctgcttttaaacat
ttgaaacagcaggcttctatattaggtaacatggaaagattaaatttgcttggaccaaga
agatgttttgttgaatttggagctggacgaggaaaactgtctcactgggttgatagagcc
ttacaagatgctaaagatgttcacttccttcttgttgaaagagcaactaccagatttaag
gtagatgggaagcacagaagaaacagttttgagaggcttcaagttgatatacagcacttg
tgcttaagtaaggtgccagttcttgtgaaagagaaactgcctgtggtaggcattggaaag
catgtatgtggctctgcaacagatcttgctctaagatgtttggctgaaagctatgcaaac
ctctgtgatgatgacggaagggaaagtccaacagctaaacgctggaagagcagtggaact
gacggacctcccaataattctcccagtgaaatgtgtagcaagtcttcagttgagaactgg
agccctgtggctggcattgctattgcgctgtgttgccatcataggtgcgactggaagcat
tatgtgggtcaagagttttttaccgcagtagggcttggagtgacagaattcgattatttt
aaaagaatgacaagctgggccacttgtggcatgagagaaagtggtccccagacctcgaca
attgaagtggagagcaaagagcaaggcagcgaggctgaagaacaggacccgcatgacaga
agcgtggagtgtagttcagatagtctgcaagggttgctgaccaccgaggaacgaaagcag
ataggtcacctgtgtaaactgttgattgatcatggccggattgaatatttacagcaaaga
gggtacgatgctgtattgcagtactatacggatcccagtgtgtccttagaaaatgtgcta
ttgacagcagtaccacgtcagttttcattaccttactcagtttcttaa
DBGET
integrated database retrieval system
