Gekko japonicus (Schlegel's Japanese gecko): 107112658
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Entry
107112658 CDS
T04299
Symbol
DDX1
Name
(RefSeq) DEAD-box helicase 1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gja03041
]
107112658 (DDX1)
03016 Transfer RNA biogenesis [BR:
gja03016
]
107112658 (DDX1)
Enzymes [BR:
gja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107112658 (DDX1)
Spliceosome [BR:
gja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107112658 (DDX1)
Transfer RNA biogenesis [BR:
gja03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
107112658 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
DUF5766
PFK
Motif
Other DBs
NCBI-GeneID:
107112658
NCBI-ProteinID:
XP_015269341
UniProt:
A0ABM1K6K4
LinkDB
All DBs
Position
Un
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGGGVLNKWQMNPYDRGSAFAIGSDGVCCQSREVKEWH
GCRSTRGVTKGKYYYEVACHDQGLCRVGWSSMQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDVDKGQIKFSKNGKDLGLAFEIPPHLKNQALFASCVLKNAELKF
NFGEEDFKFPPKDGYIALDKAPESNAVKSDHAGSAQVAQTKNFPNAPKALIVEPSRELAE
QTLNNVKQFKKNVENPKIRELLIIGGVAAREQLSVLEQGVDIVVGTPGRLDDLVSTGKLN
LSQIRFLVLDEADGLLTQGYSDFIHRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLAE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFVQQGGGPDRKGHQF
SCVCLHGDRKPHERKQNLERFKKADVRFLICTDVAARGIDISGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVASEKEKVWYHSCPSRGKGCYNTRLKDEGGCTIWYNEMQLLG
EIEEHLNCTISQVDADVKVPVDDFDGKVTYGQKRATGGGSYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttttcggagatgggtgttatgccagaaatagctcaagctgtagaagagatg
gactggcttcttcctacagatatccaagcagagtctatcccattgattttaggaggtggt
gatgtacttatggctgcagaaactggaagtggaaaaactggtgcattcagcatcccagtt
attcaaattgtatatgaaactctaaaggaccagcaagaagggaaaaaagggaaaaccact
ataaaaactggtgggggagtgctcaacaaatggcagatgaatccatatgacagaggatct
gcgtttgcaattgggtctgatggtgtctgttgccaaagcagagaggtaaaggagtggcat
ggatgcagatcgactagaggagtgactaaaggaaaatattactatgaagtggcctgtcac
gaccaggggttatgcagagttgggtggtcctctatgcaagcttcattagacttgggcact
gacaaatttggctttggctatggtggaactgggaagaaatctcacaacaaacagtttgat
agttatggggaggaattcactatgcatgacacaataggatgctatttagatgtagataaa
ggacagatcaaattttccaaaaatggaaaagacctggggcttgcatttgaaattccacca
catctaaagaaccaagcactctttgcatcttgtgttctgaagaatgctgaattaaaattc
aactttggtgaagaagactttaaatttccaccaaaagatggctatattgctcttgataag
gctcctgagagtaacgctgtgaaatctgatcacgcaggaagtgcacaagtagctcaaacg
aagaatttcccgaatgctcccaaagccttgattgtggagccctctagggagctagcagag
caaacactgaacaacgtgaaacagttcaaaaaaaatgtagagaaccctaagataagggaa
ctcctcattattggtggtgttgcggcaagagagcagctctccgtcttggagcaaggggtc
gacattgttgtaggaacccctggaaggctggatgatctcgtgtcaactggaaaactgaat
ttgtctcagatcaggttcctggttcttgatgaggctgatggcctactcacccaaggttat
tcagacttcatccacagaattcattctcagattcctcagataacttcagatgggaaaagg
ctgcaggtaattgtgtgctctgcaacacttcattcatttgacgtgaagaagctggcagag
aagatcatgcacttccccacctgggttgacttgaaaggagaagattctgtcccagaaact
gtgcatcacgttgtggtccctgtgaacccaaaaactgacaaactctgggaaaggcttggc
aaaaatcacatcaggactgatgaggtgcatgcgaaagacaacacaagacctggtgctaat
actccagaaatgtggtcagaagcaatcaagatcctaaaaggagagtacactgttcgggcc
atcaaggaacacaagatggatcaggcaattatcttctgtagaactaaaatagactgtgac
aacatggaacaatactttgtccagcaaggaggaggtccagatagaaaaggacatcagttc
tcatgtgtctgcctgcatggtgacagaaaacctcatgaaagaaaacagaatttggagcgt
ttcaagaaagcagatgtaagattcttgatctgcactgatgtagccgctagaggaattgat
atcagcggtgttccttatgttatcaatgtcacacttccggatgaaaaacagaactacgtt
catcggattggcagagtgggaagagctgagcgaatgggcctcgctatttcccttgtggca
tcagaaaaagaaaaggtttggtaccattcatgccccagtcgagggaaaggttgctataat
acaagactgaaggatgagggcggctgcaccatttggtacaatgagatgcagctgttgggt
gaaatagaagaacacctgaactgtaccatttcccaggttgacgctgatgttaaggttcca
gtggatgattttgatggcaaagtcacctatggacagaagagggctactggtggtggaagc
tataaaggccatgtggatattttggcacctaccgtacaagagttggcggcccttgaaaag
gaggctcagacatctttcttgcatcttggctaccttcctaaccagctgtttagaacattt
tga
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