Gekko japonicus (Schlegel's Japanese gecko): 107112661
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Entry
107112661 CDS
T04299
Symbol
PCDH9
Name
(RefSeq) protocadherin 9
KO
K16498
protocadherin delta 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107112661 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gja01009
]
107112661 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gja04515
]
107112661 (PCDH9)
Protein phosphatases and associated proteins [BR:
gja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107112661 (PCDH9)
Cell adhesion molecules [BR:
gja04515
]
Cadherins
Protocadherins
107112661 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
MAP17
V_ATPase_I
EphA2_TM
RCR
Big_9
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
107112661
NCBI-ProteinID:
XP_015269343
LinkDB
All DBs
Position
Un
AA seq
1032 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAVAQELIYTIREELPENVPIGNIPKDLNISHISSATGTST
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDRERLCAGAAYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADVGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRALDREETAIHKVTVLASDGSSTPARATVSINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAIDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPADVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPEDAVHEPI
NGTISLPAELEEQSIGRFDWGAAPPTTFKPSSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLXXXXXXXXXXXSASECSSQGGFKAKGPLHSRQVNDHFYWS
ISTAYKCPVNQY
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgctggctgccctgattgcctgtctcaggctggattct
gccgtcgctcaagaacttatttacaccattcgagaggagcttccggaaaacgtacccatt
gggaacataccaaaggatctgaacatctctcacatcagttcggccacggggaccagtacc
agtctcgtctaccgactggtgtccaaagctggggatgcccctttggtcaaagtgtccagc
acgaccggggagatctttaccacctccaaccggatcgacagggaacggctctgtgccgga
gcggcgtacgcggaagagaatgagtgcttcttcgagctggaggtggtgattctccccaat
gactttttccggctgatcaagatcaagatcatcgtgaaggataccaatgacaatgccccc
atgttcccgtcgcccgtcatcaacatctccatccccgaaaacactctgatcaacagccgc
tttcctattccctcggctacagaccccgatactggtttcaatggggtccagcactacgaa
cttttgaatgggcagagtgtctttgggctggatatagtggagactccagagggagagaag
tggccacaactgattgtacagcagaacttggacagggagcagaaagacacctatgtgatg
aaaatcaaagtggaggatggaggaaccccccagaaatccagcaccgctatcctccaggtc
acagtaagtgatgtgaatgacaacaggccagtttttaaagagggtcaggtggaggtccac
atcccagagaatgcccccgtagggacctcggtcatccagcttcatgctacagacgcagat
gtaggaagcaatgcagagatcagatacatctttggtgcccaggttgctcctgcaactaaa
agactctttgctttaaacaacacaactggactgattacagtccagagggccttagatcga
gaggagaccgctattcacaaggtgacggtgttggccagcgatggtagctccacacctgct
cgggcaactgtttccatcaatgtgactgatgttaatgataacccccctaacatagacctc
aggtacattataagtcccatcaatggcacagtgtacttatctgagaaagaccctgtcaat
accaagatcgctctgattacggtctcagataaggacactgacgtgaatggcaaagtgatc
tgtttcattgagagagaggtgccgttccacttgaaggctgtctacgacaaccagtacttg
ttagagacctcttccttgctggactacgagggcaccaaagaattcagctttaaaatagtt
gcgtccgattccggcaagcccagtttgaaccagaccgccctggtaagagtaaagctggag
gatgagaatgacaaccctcccattttcagccagccggtaattgagctgtcggtttctgaa
aacaatcgccgtggtctgtacttaaccactattagtgccacggatgaggacagtgggaaa
aatgcagacattgtgtatcagctgggccccaacgcttccttttttgatttggatagaaag
accggggttctgacagcctcccgggtctttgaccgagaagagcaggagaggttcattttc
actgtaacagcccgagacaatggtaccccacccctgcagagccaagccgctgtcatagtt
acggtgctggacgagaatgacaacagtcccaagttcactcataatcattttcagttcttt
gtgtcagagaacttgccaaagtacagcaccgtaggagtgatcacggtaactgatgcagac
gcaggagagaataaggcggtgaccctttccatcctgaatgacaacgagaactttgttctg
gatccttattctggagttataaagtcaaatgtttcctttgatcgagagcagcagagttcc
tacacctttgacgtcaaggccattgatggagggcaaccaccccgctcatcaaccgcaaag
gtcaccatcaatgtcatggatgttaacgacaacagtcctgtggtcatctacccaccttcc
aacacttcttttaaactggtacccctttcggctatccctggctctgtggtagcggaagtg
tttgctgtcgacattgacacggggatgaatgctgaacttaaatataccattgtcagtgga
aacaacaaaggtttatttcgtatcgatccggtgacgggtaatattaccctagaagagaag
ccaactcctgctgatgtggggctgcatcggttagtggtcaacatcagcgacctgggttat
cctaaatccctgcacactcttgtcctcgtgtttttgtatgtcaatgacacggctggaaat
gcttcttatatttatgacttgatccgcaggactatggaaacccccttggataggaacatc
ggagatagcagccagccataccaaaacgaggactaccttaccatcatgatcgccattgtg
gcgggcgccatggttgtcattgtggtgatctttgttaccgttctggtccgctgccgccac
gcctcccgcttcaaagcggcccagaggagcaaacaaggtgccgagtggatgtcccccaac
caggagaacaagcagaacaagaagaagaagcggaagaaaaggaagtctcccaagagttcc
ctgttgaactttgtgaccattgaggaatccaaacctgaggacgcagtccacgaacctatc
aacgggaccattagccttccagctgagctggaggagcagagtataggaagatttgactgg
ggtgccgctccgcccaccacctttaaaccgagcagccccgatctcgcgaagcattacaaa
tctgcctctccgcagtccgctttccatctcaaacctgacactcccgtctcggtgaaaaaa
catcatgtgattcaggagctccctttggacaacacctttgtcgggggctgtgacactctt
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcagtgcctcagagtgcagttcccaagga
ggcttcaaggcaaaaggccccttgcacagcagacaggtaaacgaccacttctactggtct
ataagtactgcctacaaatgtccagtcaaccagtattaa
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integrated database retrieval system
