Gekko japonicus (Schlegel's Japanese gecko): 107112767
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Entry
107112767 CDS
T04299
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA decapping 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107112767 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107112767 (EDC4)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107112767 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
107112767 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_HPS5
ApoLp-III
CelTOS
WD40_Prp19
WDR55
NBCH_WD40
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
107112767
NCBI-ProteinID:
XP_015269440
LinkDB
All DBs
Position
Un
AA seq
1402 aa
AA seq
DB search
MASASIDIEDATQHLRDILKLDRPGGSVNENQRPPSSYNGDLNGLLVPDPVAGGDGASLA
KSVPQTVPLGTLQEKQVICLSGDDSSTCVVITAKDVEIVASSDSSITSKARGSNKVKIQP
VARYDWEQKYYYGNLIAVSNAYLAYAIRVASNGSAMVRVLSISTAERTLLKGFTGGVADL
AFAHLNSNQLACLDEAGNLFVWHLAMENGKIHEEILVNIKRPDGTPLNSFRRIIWCPFIP
DENEEACEEGSQTLALLHEDRAEVWDLDIIRANHSSWPVEVTSIKEGFIVVKGHSTRLSE
GALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDP
EVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSMSVLPSLKACLDLSAEYLI
LSDVQRKVLYVMELVQNQEEGKAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEE
ESDGLTTEGTQGTGTVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDTAASIPPHGSHE
DFAFPDHLADLGTEGLGSEKGSMHGSQPDVRRISELSVPVDFLSSSSDMKPKLMTPDAFM
TPSTSLQQITVSPGSSISSLTAVSAMSTSSVNEPSISRPAEEVSLSPKLQLDSSLTLSSS
TGSLQTSPRNHAVLLPGLPDKLTPKAPVPVSPANPPLALERQDIEPLAVPQSSPTRERSP
DVISSASTAMSQDIPEIASETLQRSFGAAPSGLPAEGLESNHHADSMASAASALHLLSPR
NRHGSEHSHHSLDVASAEVDMLSAPSLLETALPQENAASDASVSQPWPAAPDITRETRNS
MADSPRNEVEEKHKSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASASVAFGAKAAAQ
RHPVKDWKAKGSPRASPKLKRKGKKEDCSRDMNQSPRSFDPQVPPEYQDELMCLLRSQQR
EIADLRQNQMELMQRLTDHLDAVQSSLMGHIERVIDSQQQQEQRRLDQVLAEGQQRNGQL
QEHLSQQLTQSLSTAACNRLERTIREEMKKTVPPCISKTLDPITGQLSNTVAAKLTAIEG
TLKENVVKLVKSKNLTDAFARAAADALQGPMQSAYREAFQSVVLPAFEKSCQSMFQQIND
TFKQGTQEYIQQLETHMKNKKAREQDTRDSLLGQLRQLVNSFQSTTDQLASTIASSVHSE
VQHQLHILVGNMQDSILAQVQRVIKGEVSTAMKEQQAAVTSSIMQAMRSAAGTPIPAAHL
DFQSQQAHVLQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPQQVFGQLPCPLSQPVLL
SLIQQLSSDLGARTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQAEPHN
TLSKPARRLMIMLQGLATPSMS
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgctagtatcgacatcgaggacgcgactcagcacctgcgagacatcctcaag
ctggaccggccgggcggttcagtgaacgaaaaccaaagaccacccagttcatacaacgga
gacctgaatggtttgctggtgccggatcccgtagcaggtggagatggggcttctttggcc
aagtcggtgcctcagacagttcccttgggaacactgcaagagaagcaagtcatctgcctt
tctggtgatgacagttccacctgtgtggtgataacagctaaagatgttgagatagtagcc
agcagcgactccagcatcaccagcaaagctagaggaagcaacaaggtaaaaatccagcca
gtagcaaggtatgattgggagcagaaatactactatggcaacctgatcgccgtgtcaaat
gcctacctggcgtatgccattagagttgccagcaacggctctgccatggtgcgggtcctg
agtatcagcacggccgagcggaccctgctgaaaggcttcacgggtggcgtggcggacctg
gcctttgcccacctcaactccaaccagctagcctgcctggatgaagctggcaacctcttt
gtgtggcacctggccatggagaacggaaagatccacgaggagatcctggtgaacatcaag
cgacctgacgggactcctctgaacagcttccggaggatcatttggtgtcccttcatcccg
gatgagaacgaggaggcttgcgaggaaggcagccagaccctggcacttctgcacgaggac
agggcagaggtttgggaccttgacataatccgagccaaccacagttcatggccggtggag
gtgaccagtatcaaagagggcttcatcgtcgtgaaaggacacagcacgcgcctgagcgaa
ggagccctttcccctgatggaacggtcttggccacagcaagccacgacggatatgtcaaa
ttctggcagatctacatagaagggcaagatgaaccaaggtgccttcacgagtggaagccc
catgacggcaggcccctctcctgcttgctgttctgcgacaatcacaaaaaacaagaccca
gaagttcctttctggaggttcctcatcacaggagcagatcaaaacagagagcttaaaatg
tggtgcacggtatcctggacctgtctgcagactatccgattttcaccagatatattcagc
tccatgagtgtccttcccagcctcaaggcctgcctggacctctcggctgagtacctgatc
ctgagcgacgtgcagcgaaaggtcttgtacgtgatggagctggtacagaaccaggaggag
gggaaagcgtacttcagctccatctcagagttcctgttgacccatcctgtcctgagcttt
ggcatccaggtggtcagccgctgccggctgagacacacagaggtcctcccggctgaagag
gagagcgatggcctgaccacagaaggcactcaggggactggaacagtagaatcagctgca
ggggtgctgatcaagctcttctgtgtccacaccaaggcccttcaggatgtgcagatcaga
tttcagcctctccatagtccagatacagctgcttcgatccctccccatggttcccatgaa
gattttgcattcccagatcacttggctgacttgggcacggaagggctgggatccgagaag
ggctccatgcacggctcgcagcctgacgtacgccgcatttcagagctgtctgttcccgtg
gacttcctctcctcctcaagcgatatgaagcccaagctgatgactcctgacgcattcatg
actcccagtacatctttgcaacagatcacagtgtcgcctggaagcagcattagttccctc
acggctgtctccgccatgagcacttcttcggtcaacgagccatccatttctaggccggct
gaagaagtgtccctgagcccaaagttgcagcttgacagcagcctcacgctgagcagcagc
accggaagcctgcagacgagtcccaggaaccatgcggtcctcctccctggcctccctgac
aagctgaccccaaaggccccggttccagtttcccccgctaatcctccacttgcactggag
cggcaggacatagagcccctggcggtgcctcagtcttcccccacccgcgaacgctcgccg
gacgtcatttcctccgcctccaccgccatgtcccaggacatcccggagatcgcctcagag
accctgcagcgcagcttcggcgcggccccgtctgggctccccgcagaaggcctggagtcc
aaccaccacgccgacagtatggcctccgcagcgtcggccctgcacctgctgtctccacgg
aaccggcacggctcggagcacagccaccactccctggacgtggcctctgccgaggtggac
atgctgagtgcgccctccctgctagagacagccttacctcaggaaaatgctgcttctgac
gccagtgtgagccagccatggccggccgcccccgacattaccagggagaccaggaatagc
atggcagacagccccaggaatgaagtagaggagaaacacaagagctcatatcacaggcac
agttaccacctgcttcagcacgacagtcaggacgccagtgccgagcaaagcgatcatgac
gatgaagtggcgagcttggcttctgcgtcggtcgcgtttggtgccaaagcagctgcccag
aggcaccctgtgaaggactggaaagccaaagggtctccacgagcttctccaaagctaaag
cgaaaagggaagaaagaggactgttccagggatatgaaccagtccccaaggtccttcgat
ccgcaggtacctcctgagtatcaggatgagttgatgtgtctgctgaggagccagcagagg
gagattgctgacctgaggcagaaccagatggagctgatgcagaggctcacggaccacctg
gacgctgtgcagagctctctcatgggccacatagagcgagtgattgactcccagcaacag
caggagcagcggaggctggaccaggtcctcgctgagggacagcagcgcaatgggcagctt
caggagcatctctcccagcagcttacccagtccctctctacggctgcctgcaatcgcctg
gagaggaccatccgcgaggagatgaagaagaccgtgcccccctgcatttctaagaccctg
gaccccatcactgggcagctgagcaacaccgtggcagccaagctaacagccattgaagga
accctgaaggagaacgttgtcaagctggtgaaatccaagaacctgacggatgccttcgcc
cgggcggctgccgatgccctgcagggcccgatgcaatcggcgtacagggaggcgttccag
agcgtggtgctgccggcttttgagaagagctgccagtccatgttccagcagatcaacgac
accttcaagcaaggcacgcaagaatacattcagcagctggagacgcacatgaagaacaag
aaggcccgcgagcaggacacccgggattccctgttgggccagctgcggcagctggtcaac
tccttccagagcacgaccgaccagctggcgtccaccattgcgtccagcgtgcactcggag
gtgcagcatcagcttcacatcctcgtgggcaacatgcaagactccatcctggcccaggtg
cagcgagtgatcaagggggaggtgagcacggccatgaaggagcagcaggctgccgtcacc
tccagcatcatgcaggcgatgcgctcggctgccggcacccccatccccgccgctcacctc
gacttccagtcccagcaggctcacgttctacagctcttgcaacaggggcacctgaatcaa
gccttccagcaggcactcaccgcagccgatctgaacttggtcctctacgtctgcgagacc
gtcgaccctcagcaagtgtttgggcagctcccttgcccactctcccagcccgtcctcctc
tctctcattcagcagctctcctcggacctgggagcccggacggaactcaagctgaattac
ctggaggaggcggtgatgcacttagaccacagcgaccccatcacccgtgaccacatgggc
tcggtgatgaaccaggtgcggcagaagctcttccagttcctgcaggcggagcctcacaac
accctgagcaagccagcgcggcgtctgatgatcatgcttcaaggcctggccacgcccagc
atgtcctaa
DBGET
integrated database retrieval system
