Gekko japonicus (Schlegel's Japanese gecko): 107112781
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Entry
107112781 CDS
T04299
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03022
Basal transcription factors
gja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107112781
09124 Replication and repair
03420 Nucleotide excision repair
107112781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gja03021
]
107112781
03400 DNA repair and recombination proteins [BR:
gja03400
]
107112781
Transcription machinery [BR:
gja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107112781
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107112781
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Zn_ribbon_GTF2H2
HscB_4_cys
Pyocin_S
Motif
Other DBs
NCBI-GeneID:
107112781
NCBI-ProteinID:
XP_015269452
UniProt:
A0ABM1K6W5
LinkDB
All DBs
Position
Un
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEVLKEDESGSLKASIEDILFKAKRKRIYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQVGIIVTKGKRAEKLTEL
SGNPRKHIAALKKAVDISCHGEPSLYNALNLATQTLKHMPGHTSREVLVIFSSLTTCDPS
NIYDLIKCLKAIKVRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYRELLMQHVSPPP
ACSSSESSLIRMGFPQHTIASLSDLDAKPSFSMAHLENSNESGLTLGGYFCPQCRAKYCE
LPVECKVCGLTLVCAPHLAQSYHHLFPLDAFQEVPVELYKGERYCQGCQGEIKDQHLYIC
KVCQNVFCVECDLFAHDILHCCPGCIHKHPVPPCL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaacccgaaagaaccaaacggtgggaaggtggttatgaaagaacatgggaa
gtgcttaaagaagatgagtctggatcattgaaggccagtatagaggatattctttttaag
gccaagaggaaacgaatctatgaacatcatggacaagttcgacttgggatgatgcgccac
ctgtatgtagtggtcgatgggtcaaggacgatggaagaccaggatttaaaaccgaacagg
ctgacttgcaccttaaagctcttggaatattttgttgaagaatactttgaccaaaatcct
attagtcaggttggcattattgtaacaaagggtaaaagagctgaaaaactgactgagctt
tcagggaatccaagaaaacatatagctgctctgaagaaagctgtagacatttcgtgtcat
ggagagccatcgctatataatgccctaaatctagccacacagacattaaagcacatgcca
ggacatacaagcagagaggttttggtaatattcagcagtctaacaacatgtgatccttct
aatatatacgacctaattaagtgtttaaaggcgatcaaagtcagagtgtctgtcataggc
ctttctgctgaagttcgcgtttgcactgttcttgctcgggaaactggtggaacctatcat
gtaattttagatgaaagtcattacagggaactcctgatgcagcatgtcagtccaccacct
gcctgttcaagttctgaaagctcccttattcgaatgggctttcctcagcatactatcgcg
tctcttagtgatctggatgcaaaaccatcatttagcatggcgcacctggaaaacagcaat
gaatcaggtcttactttgggagggtatttctgcccgcagtgcagagccaaatactgtgag
cttcctgtggaatgcaaagtgtgtggtcttacactggtatgtgcacctcacctggctcaa
tcttatcatcacctatttcctttggatgcctttcaggaagtcccggtagaactgtataaa
ggagaacgctattgtcaaggttgccaaggagaaatcaaggatcaacatctctacatttgt
aaagtctgccagaacgtgttttgtgtggaatgtgacctttttgctcacgatattctgcac
tgctgtcccggctgcattcacaagcaccctgttcctccctgtctatga
DBGET
integrated database retrieval system
