Gekko japonicus (Schlegel's Japanese gecko): 107113264
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Entry
107113264 CDS
T04299
Symbol
ABCA1
Name
(RefSeq) ATP binding cassette subfamily A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja02010
ABC transporters
gja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107113264 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107113264 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gja02000
]
107113264 (ABCA1)
Transporters [BR:
gja02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107113264 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
AAA_23
R1_ABCA1
Motif
Other DBs
NCBI-GeneID:
107113264
NCBI-ProteinID:
XP_015270056
LinkDB
All DBs
Position
Un
AA seq
1884 aa
AA seq
DB search
MAFWSQLGLLLWKNFTCRRRQTFQLLIEIAWPLFVFFILSSVRLSFPPHEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGESPGIVGNFNKSIVYRLFSDAKRLLLYSQKDT
SIKDAQKLVGKLQKAGNSVSAVKLRDFLVANETFSDFLHRNASIPRFAVDEILNSKINLQ
RIITSGYQMRVEDLCNSTKLSEFVIIPNPAVAMFSDALICLMPKDKLASAEKVFQANLDV
MKPFLKGITSNSTLQDLKEAAETLLGSLGRLLKELVSMKSWSDMRQEVLFLTNVNTTSPS
AEIYQAVSRIVCGHPEGGGLQIKSLNWLEDSNYKAIFGTNSTDEEVADFYDNATTPYCND
LMKSLESSPLSRIIWRALKPLLVGKVLYTPDTPATRAVMAEVNKTFQELGVFRDLGGMWE
EIRPKILTFMEKSQEMDVVRTLLKNKDLWHQYLEGSDWTIEDVAVFLAKYPEDVQPVNGS
TYSWRDAFNETDHAVMAISRFMECVNLDKLEPMPSEVRLINKSMELLDQRRFWAGIVFPE
MAPGSTNLPHHVRYKIRMDIDNVERTNKIKDGFWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRALTGTEKKTGVYVQQMPYPCYVDDIFLHVMSRSMPLFMTLAWIYSVAMIIKGIV
YEKEARLKETMRIMGLDNGILWLSWFISSLIPLLLSAGFLVLILKNGNLLPYSDPSVVFV
FLSIFAVVTILQCFLISTLFSRANMAAACGGIIYFTLYLPYVLCVAWQDYVGFSLKIFAS
LLSPVAFGFGCEYISLFEEQGVGVQWQNIFESPIKEDSFNLTTSFYMMLLDTLLYGIMTW
YIDSVFPGQYGIPRPWYFPFLKSYWCGEKYEQQQPPPSLRSGSSEICMEEEPSHLSLGVS
IQSLVKVYRNGKKLAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFIL
GKDIRSELSSIRQNLGVCPQHNVLFDERDIAALFIRAYAESRSFKNGACGMQRKLSVALA
FVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISH
GKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSSCRNSSSTVSFLKKDDSVSQSSSDAG
LGSDHESDTLTIDVSAISNLIMKHVPEARLVEDIGHELTYVLPYQAAKEGAFVELFHEID
DRLSDLGISSYGISETTLEEIFLKVAEDNGVDAETSDGTLPARRNRHLFGDRQSCLRPFT
EDDAFDPNDSDIDPESRETDLLSGMDGKGSYQMKGWKLTQQQFVALLWKRLLIAKRSRKG
FFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQPWMYDEQYTFVSNDAPEDAGTQQLLN
ALLSEPGFGTRCMKGHHILDTPCSVGEKDWTISPVPETVMEIFQNGNWTMENPSPSCMCS
NDKAKKMLPTCPPGAGGLPPPQRTQNTTDILQNLTGRNISDYLVKTYVQIIGKGLKSKHW
VNEFRYGGFSLGASSSLVLPPSQEVNDAIRQVKKILELAKGSSGERFLNSLGSFMKGLDT
NNNVKVWFNNKGWHAVGSFLNVINNAILRANLQEGENPSTYGITAYNHPLNLTKQQLSEV
ALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLANFVWD
MCNYVVPATLVIIIFICFQQKSYVSSSNLPVLALLLLLYGWSITPLMYPASFVFKIPSTA
YVVLTSVNLFIGINGSVATFVLELFTNNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQ
AMADALERFGENRFVSPLSWDLVGRNLFAMAVEGAVFFLITVLIQYRFFIKPRXDGLCDK
CAPNLGKTVMEWGVARGFESFEGW
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggcattctggtcacagctggggttgctgctatggaagaacttcacctgtcggagaaga
cagacgttccagctgctgattgaaattgcctggcccctgtttgtcttctttatactatca
tctgtgcggctgtcttttccaccccacgaacaacatgaatgtcactttccaaataaggcc
atgccttcagctggaacattgccctgggtccaggggattatctgtaatgccaacaatcca
tgcttccgctatccaactcctggggagtcgccaggcattgttggaaatttcaacaaatct
attgtttaccggttgttctcagatgccaaacggttgctgctgtacagccagaaagacacc
agcattaaagatgcacagaagctagtggggaaactgcagaaagctgggaactctgtgtca
gctgtgaaactccgggatttcctggttgccaacgagacattctctgacttcctccatcgt
aatgcttccataccaagatttgcagtggatgaaatactgaactctaagatcaatctccag
cggatcattacatctggctaccaaatgagggtggaagacctttgcaattcaaccaagctg
tctgagtttgttattatcccaaacccagcggtagctatgttcagtgatgccttgatttgc
ctaatgcctaaggataaacttgcttctgcagagaaggtgttccaggctaatctagatgtc
atgaagccatttctgaaagggatcacctccaattccactttacaggatctgaaagaagct
gcagagactttgttggggagcctcggaaggctactgaaagagcttgtgagcatgaaaagt
tggagtgacatgaggcaggaagtattgttcctgaccaacgtgaacaccacgagtccttcg
gccgaaatttaccaagcagtgtcccggattgtttgcggccatccagaaggaggtggattg
caaattaagtctctcaattggctggaagacagcaattacaaagccatctttggcaccaac
agcacagatgaagaggtagctgatttctacgataacgccacaacaccctactgcaatgac
ctcatgaagtctctggaatccagtccactttcccgcattatatggagagccctgaagcct
ttacttgtaggaaaagtcttatacacgcctgacacgccggcaacgagggcagtgatggct
gaggtaaacaagacattccaagagctaggtgtcttccgtgatctcggagggatgtgggaa
gagataagaccaaagatactaactttcatggagaaaagccaggaaatggacgtggtccgg
actttactaaagaacaaggacctctggcaccagtacttggaaggttcagactggacaatt
gaggatgttgccgtgttcttggcaaaatacccagaggacgttcagcccgtgaatggctca
acctactcctggagggatgctttcaatgagacagatcatgctgttatggccatttcccga
ttcatggaatgtgtcaatttggacaagctggagcctatgccaagtgaggtacgtcttatc
aacaagtccatggagctgctggaccagaggagattttgggcaggcattgtcttccctgaa
atggctcctggcagcacaaacttgcctcatcacgtcaggtacaagatacggatggacata
gacaatgtggaaaggacaaacaaaattaaggatgggttctgggacccaggtcctcgagct
gacccctttgaagacatgcgctacgtctggggaggctttgcttacctacaggatgtggtg
gagcaggcaatcatccgggctctaacaggcacagagaagaaaaccggcgtctatgtccag
cagatgccgtacccctgttacgtggatgacatattcctgcacgtcatgagtcggtcgatg
cccctcttcatgaccctggcttggatttactctgtggcgatgatcatcaaagggatcgtg
tacgagaaggaagcccggctgaaagagaccatgaggatcatgggcctggacaacggcatc
ctctggctcagctggttcatcagcagcctcatcccactcctcttgagcgcgggattcctc
gttctgatcctcaagaacgggaacctgctgccttacagtgatcccagcgtggtgtttgtc
ttcctgtcgatttttgccgtggtgaccatcttgcagtgcttcctcatcagcaccttattc
tccagggccaacatggcggcagcttgcggaggaatcatctacttcactctctacttgccc
tatgttctctgtgttgcctggcaggattatgtcggcttctctctcaaaatatttgccagc
ctgctttctcctgtagcctttgggtttggctgtgaatacatttccctgtttgaagagcag
ggtgttggagtccagtggcagaacatctttgagagccccataaaagaagacagcttcaac
ctgaccacttctttctacatgatgctgttggatactttgctgtacgggattatgacttgg
tacattgattctgtcttcccaggccagtatggcattcccagaccctggtactttcccttc
ttgaagtcctactggtgtggtgaaaagtacgagcagcagcagccgcctccatctctccgc
tcggggtcgtctgaaatctgtatggaagaagagccgagtcatcttagccttggcgtatcc
attcagagcctggtgaaggtttatcgcaatggcaaaaagctggctgtagatggcctcacc
ctgaatttctatgaagggcagatcacctctttcctgggacacaacggagctgggaaaaca
accacgatgtccatcttgactggactatttccaccaacttctggcacagctttcatcctg
ggcaaagacatccgctccgaactcagcagcattcggcagaatctgggggtctgccctcaa
cacaatgtcctgttcgatgagcgtgatatcgcagccttgttcatccgcgcatacgcagaa
tcaagatcttttaaaaatggcgcctgtggcatgcagagaaagctttctgtagcgctggcc
ttcgtaggtggctctaaagttgtcattctggatgagccaacagcgggtgtcgatccttat
tctcgccgagggatctgggagctgcttttgaaatatcgccaaggccgcaccatcattctc
tccacacatcacatggacgaggcagacatcctcggagaccggattgctatcatatctcac
ggcaaactgtgctgcgtcggatcttctctgtttctgaagaaccagctgggtacaggctat
tatctgaccttggtcaagaaagatgtggactcctcactaagctcctgcagaaacagtagc
agcacagtgtctttcctgaaaaaggacgacagtgtctcccagagtagctccgatgctgga
cttggcagtgaccatgaaagtgacactctgacgattgatgtgtctgcaatttccaatctc
atcatgaagcatgtccctgaagcgaggctcgtagaggatatcggccacgagctaacctat
gttttgccataccaagccgccaaggagggtgcttttgtggaactgtttcatgagatcgat
gaccgcctctctgacctgggcatttccagttatggcatttctgagaccactctggaggag
atatttctcaaagtggcagaggataatggtgtggatgcagagacctcagatggcacttta
cctgctagaaggaatcgacatctctttggagacaggcaaagctgcctccgtccattcaca
gaagatgatgcttttgaccccaatgattccgacatagatccagaatcccgagagacggac
ctgttaagtgggatggacggcaaaggatcctaccagatgaagggctggaagctgactcag
cagcagtttgtcgccctgctctggaagaggctgctgatcgccaagcgcagcaggaagggc
ttctttgcacagattgttctcccggctgtgttcgtttgcattgctctaatgttcagtctg
attgtgcctccctttggtaaatatcccagcttggaattgcaaccatggatgtatgatgag
cagtacacatttgtcagcaatgatgctccagaagatgctggcactcagcagcttttgaac
gctctcctcagtgaacctggttttgggacccgctgtatgaaaggacaccacattctagat
accccttgttctgttggagaaaaggactggaccatcagtcctgtgcctgagacagtaatg
gaaatcttccagaatgggaactggaccatggagaatccttccccatcctgcatgtgtagc
aatgacaaggccaaaaagatgcttcctacgtgtcctccaggggccggtgggctgcctcct
ccccagagaacgcagaacaccacagacatccttcagaacttaacgggccgcaacatttct
gattacctggtgaagacatacgtacagatcattgggaaaggtttgaagagtaagcactgg
gtgaatgaattcaggtatggaggattttcactgggagccagtagttctcttgtgcttcct
ccaagtcaagaagtgaatgatgccatcagacaagtgaagaagatcttagaactggccaag
gggagttctggagaacgttttcttaatagtctagggagcttcatgaagggactggataca
aacaataacgtaaaggtgtggttcaataacaagggctggcacgcagttggctcctttctc
aatgtgatcaacaatgcgatcctccgggctaacctgcaggagggagagaaccccagcacc
tatggcatcacagcttacaaccacccactgaacctcaccaagcaacagctgtctgaagtc
gccctgatgaccacgtcagtggatgttctggtctccatctgcgtcatctttgccatgtcc
tttgtcccggccagctttgtggttttcttgatccaggagcgagtcagcaaggccaagcac
ctgcagttcatcagtggggtgaagccggttatctactggctggccaactttgtctgggat
atgtgcaactacgtggttcctgccactctggtcattatcatcttcatctgcttccagcag
aagtcctacgtgtcttcatccaacctcccggtgcttgctctcctcctcttgctgtatggg
tggtccataaccccgctcatgtacccagcatcctttgtgttcaagatccctagcacagcg
tacgtggtgctgaccagcgtgaacctcttcattgggatcaatgggagcgtggccactttt
gtccttgagcttttcaccaacaataagctgaacaacatcaatgacatcctgaagtcggtg
ttcctcatcttcccccacttctgtctgggccgtgggctgatcgacatggtgaagaaccaa
gccatggcagatgctctggaaaggtttggtgagaatcgctttgtttcccccctctcctgg
gacctggtggggcgcaacctttttgccatggctgtggaaggtgccgtcttcttcctcatc
acagtgcttatccagtacaggttctttatcaaacccaggtaagatggcctctgtgacaaa
tgtgcccccaacctggggaagacagtcatggagtggggtgtggcacgagggtttgaatcc
tttgagggatgg
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integrated database retrieval system
