Gekko japonicus (Schlegel's Japanese gecko): 107113382
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Entry
107113382 CDS
T04299
Symbol
COL4A2
Name
(RefSeq) collagen type IV alpha 2 chain
KO
K06237
collagen type IV alpha
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04382
Cornified envelope formation
gja04510
Focal adhesion
gja04512
ECM-receptor interaction
gja04518
Integrin signaling
gja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107113382 (COL4A2)
04518 Integrin signaling
107113382 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107113382 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107113382 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107113382 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gja04147
]
107113382 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
gja00536
]
107113382 (COL4A2)
Exosome [BR:
gja04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107113382 (COL4A2)
Glycosaminoglycan binding proteins [BR:
gja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107113382 (COL4A2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107113382
NCBI-ProteinID:
XP_015270192
UniProt:
A0ABM1K905
LinkDB
All DBs
Position
Un
AA seq
1676 aa
AA seq
DB search
MRRPPPLRRLALLLVGLAVLRSGPVRAGGKSYTGPCAGRDCSGGCECFPEKGARGQPGSL
GQQGLSGPPGVEGIPGLPGHKGDKGERGRPGISGPTGEVGQRGVTGFPGADGVPGHPGQG
GSRGKPGHDGCNGTRGDPGQEGTPGTPGLPGFFSSCTWASDGQALGQVEEGTGEREGQKG
EPFVLTPDLAAEFRGDPGDPGLMGFPGPQGLPGSPGVFGPVGDPGLPGPPGLPGSPGLPG
NRGLGFYGEKGEKGIKGEKGIRGEPGIPGSHIYIAEKGEEGITGFPGQRGLPGINGLKGV
DGDVGSPGPDGFPGRDGQRGMKGEPGDRGVRGQPAYAHQPTLIKGARGDPGAPGFPGPAG
DRGEQGSPGIPGRPGPAPDFSAGRGLPGEMGPKGFVGDPGLPASDPGPPGLDGLPGPPGF
PGAPGPPGSSEYVLGPKGFPGFPGPGGSQGYPGSRGLKGQKGEPGDCRCGSDEGRRGPAG
QPGPPGFPGPIGQLGRKGEVGDQGQHGIPGFSGAKGLSGLPGLPGPPGPKGDARYVTEKG
VKGDPGIPGFPGVKGDNGLPGRDGKDGLPGLPGLPGDGVRGALGDAGEPGLPGPKGFPGE
AGLPGISLPGPQGYPGAPGDPGAHGNPGLQGPPGPPGTPAQIDCGQTVQTFFPGNRTGQQ
EAQWPGAGCPTAPKGAPGSPGLPGPRGAVGAKGVPGDFGLNGLKGVTGFQGDRGPEGVAG
PPGFTGPRGSQGLPGLPGAKGFPGSPGFSGLPGTPGAKGITGDILGAQPGFPGDAGQPGS
PGQRGPQGDQGVPGFRGTDGFPGSPGIKGGRGFPGSPGLSGRPGPPGSFGFPGMPGPQGT
GGRMGSQGFLGPPGPRGDSGDPGAPGPAGVKGLPGTKGEPGFPGVKGKAGEIGLAGVDGM
PGLPGLKGSKGSQGVGGFKGAMGLKGWPGWNGVQGEKGIPGLQGSRGLTGDPGQKGDRGE
HGPSGAPPKIMASMLQEVKGEKGDEGEAGVKGYIGFKGSKGMPGYPGQTGRPGSPGFPGY
VKGHKGETGIKGFKGFPGHPGAQGPQGIPGFPGATGRRGDKGMPGGTGTFGEKGLTGDIG
GRGDTINLPGRTGLKGEGGTAGFPGVRGPTGEKGESGDPGFTGIGGIPGSLGEQGSRGQE
GFPGQTGERGWSGDPGFPGLSGEKGSSGQPGFPGLKGPDAYGPPGFRGTWGDKGIAGEPS
SVDGSRGAPGQKGERGDPGPRGTAGGPGPAGLPGLPGVSNISGFPGDMGAPGFDGVPGYP
GPSGRPGIPAPPGSKGEVGQVGVAGADGPKGFRGDPGSDGRPGIPGFPGPKGRKGDQGVM
GFVGLVGSTGDFGPRGPKGDRGPTGFQGPPGSPGLAPVPPKLHALQGAAGPQGGRGINGS
PGEMGPQGPPGDPGFRGSPGKAGVQGRGGIPASPGFRGDQGRMGLQGPLGFEGTPGDPGT
PGIPGMPGRSVNIGYLLVKHSQSDQEPMCPVGMNKLWSGYSLLYFEGQDKAHNQDLGLAG
SCLARFSPMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMMPVVEEEIQPYISRCSVCEA
PAVAIAIHSQDVSIPHCPEGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPF
IECNGAQGTCHYFANKYSFWLTTIDTQFQHSPSSDTLKAGLIRTHISRCQVCMKNL
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgccccccgcccctccggcggctggcgctcctcctcgtgggactggcggtgctc
cgaagcgggccagtgcgagccggaggaaaatcctacaccggaccctgtgctggaagagac
tgtagtggaggatgtgaatgtttcccagaaaaaggagctcgtggccaaccaggatcactt
gggcagcaggggctctcgggaccccctggagtggaaggcatcccaggtctgccagggcac
aaaggggacaaaggcgaaagaggccgaccaggaatatctggaccaacaggagaagtgggt
caaagaggggtcactggatttcccggcgcagatggcgttcccggtcatccgggtcaaggt
ggatctcgggggaaacctggccacgatggctgcaatgggaccaggggagaccctggccag
gagggaaccccggggactccaggcttgcctggtttcttttcctcctgcacatgggcaagc
gatggccaagcccttgggcaagtggaggaagggacaggagaaagggaagggcagaaaggg
gaaccatttgtactgactcccgacttggctgcagaattcaggggcgatcccggtgaccca
ggcctcatgggctttccaggtcctcaaggtctccctggttccccaggtgtatttggtcct
gttggagaccccggactacctgggcctcctggactgccgggatctccagggcttccaggc
aacagaggtcttggcttttacggagaaaaaggtgaaaagggaattaaaggagaaaaagga
ataaggggagaacctggaattccaggttcccatatatatatagctgaaaagggcgaagaa
ggaatcaccggctttcccggacaaaggggtttgccgggcatcaatggtctaaaaggagtt
gacggagacgtgggcagcccaggaccagatggcttccctggccgagacggtcaaagagga
atgaagggagagccgggagaccgaggtgttcgaggccagccagcttatgcacatcagccc
actctgataaaaggcgcaagaggtgacccgggagcccctggttttcctgggcctgcggga
gacagaggtgaacaaggcagtcctgggattcctggtcgtcccggaccagcaccggatttc
tctgcagggagaggtttgcccggagaaatgggtcccaagggttttgttggtgatccgggg
ttgcctgcttcagatccaggacccccagggttagatggtctgcctggaccacccggtttt
cctggcgcacctggccccccaggtagttcagagtatgttctcgggccgaaggggtttccg
gggtttccgggccccgggggcagccaaggttacccagggtcacgtggactgaaaggccag
aaaggcgagccaggggattgtcgatgcggatctgatgaaggaagaaggggcccagctggg
caaccgggtcccccaggttttccaggccccattggacaacttgggagaaagggagaagtc
ggtgatcaaggccagcatggaattcctggattttccggtgcaaaagggctctcaggactt
cctggactgcctggaccaccagggccaaaaggggatgcccgatacgtaaccgaaaaaggt
gtcaaaggagacccaggaatccctgggtttcctggagtgaaaggagacaatggtttacca
ggcagagatggaaaagatggtttgcctggacttccggggcttcctggcgatggtgtaaga
ggtgccttaggggatgctggtgagccaggactgcctggcccgaagggctttccaggtgaa
gcaggcctgcctggcattagcttgccaggcccccaagggtatcccggtgctccaggtgac
cccggggcgcatgggaatcctggtttgcaaggccctccaggtcccccagggactcctgct
caaatagattgtggacaaacagtgcagacgtttttccccggcaacaggacaggacaacag
gaagcacaatggccaggtgccggctgccctacggcccccaaaggagctccaggaagtccg
gggttaccaggaccaagaggtgcagttggtgcaaagggggtcccaggagactttggtctg
aatgggctcaagggggtaacaggcttccaaggggaccgaggccccgaaggtgtcgcaggc
cccccaggattcactgggcccagaggaagtcaaggtttaccaggattacctggggctaaa
ggttttccaggtagtcctggtttctcaggtttgcctggtacaccaggagcaaaaggcatc
acaggagatatcctaggagcacagccaggcttcccaggagatgctggacaacctggatcc
ccaggacaacgaggcccccaaggagaccaaggtgtaccaggatttagaggcaccgatggg
tttccaggctcacctggaatcaaaggagggcgtgggtttccagggtctccaggcttgtcg
ggtaggccaggaccaccgggttcatttggattccctggaatgccgggcccgcaaggaacc
ggaggaagaatgggttcacagggatttcttggcccacctggtcctcgaggggattccgga
gacccaggagcacctggccctgcaggcgtaaaaggtctgcctggtaccaaaggtgaaccg
ggtttccctggcgttaaaggcaaagctggtgagattggccttgctggagtggatgggatg
cccggcctccccggtctgaaaggcagcaaaggttcgcagggcgttggagggtttaaaggt
gccatgggtctcaaaggatggccgggctggaacggagtccaaggagagaaaggcatacct
gggctgcaaggttcgcgagggctgacgggtgacccaggacagaaaggtgaccgtggagaa
cacggcccatcaggagcacccccgaaaatcatggcaagcatgctccaggaagtgaaaggt
gaaaaaggagacgaaggagaagccggggtcaaggggtacattggcttcaaaggcagtaaa
gggatgccgggctaccctggccagactggaaggcctggttcacctggtttcccaggttac
gttaaaggccataaaggagagactgggatcaaaggattcaaaggctttccggggcatcct
ggtgcccaaggacctcagggcattcccggcttccctggagccactggacgtcggggagac
aagggaatgccaggaggaacaggaacatttggcgagaagggcctgactggggacattggt
ggcaggggagatactataaatttaccaggaagaacaggtcttaaaggagaaggcggtacc
gctggcttcccaggtgtgagaggccccacaggagaaaagggggaaagcggagatccgggt
tttacgggcattggaggaattccgggctcactaggggaacagggctcaagaggacaagaa
ggattcccaggacagactggggaacgaggatggtcgggagatccaggatttccagggtta
tcaggtgaaaagggaagttctgggcagccggggtttccaggactgaaaggtcccgatgct
tacggcccgccaggtttccgaggcacttggggtgacaaaggtatagcaggagagccaagc
tccgttgacggcagtcgaggagctccaggtcaaaaaggagagagaggagatccagggcca
cgggggacagctggaggtcctggaccggctggtctgccaggccttcctggagtttccaat
atctccggattccccggggacatgggagcccccggttttgacggcgtaccaggctacccg
ggaccttcggggagacccggaatacccgctccaccgggatccaaaggagaagtgggacag
gtgggcgtggctggagcagacggtccgaaaggatttagaggagacccaggttcagatgga
agacccggaataccaggatttccagggccaaaaggaaggaaaggtgaccaaggagtcatg
ggatttgttggcttagtaggaagtacgggagactttggccccaggggacccaaaggagac
agaggaccgacaggattccagggacctccaggttcccctggcctggctcccgtccctcct
aaactgcatgctctgcagggggcagcaggccctcaggggggcagagggattaacggcagt
cccggtgaaatgggtccacaaggtccaccaggagatccaggttttagaggatcgcccggc
aaagcaggggtgcaaggaagaggaggaataccagcctctccgggctttagaggtgaccag
ggccgaatgggactgcagggtcctctgggatttgaaggtacaccaggtgatccaggtact
cctgggattccaggcatgccaggacgcagcgttaacataggatacctcctggtgaagcac
agccagtcggatcaagagcccatgtgcccagtgggcatgaacaagctgtggagcggctac
agcttgttgtattttgaaggacaagataaagcccataatcaggatctgggcctagctggg
tcgtgcttggctcggttcagcccgatgcctttcctttactgcaaccccggagacatctgc
tactacgccagccgcaatgacaaatcctactggctctccacgacggcccctcttcccatg
atgcctgtggtggaagaagagatccagccttacatcagccgctgttccgtctgcgaggcc
ccagccgtcgccatcgctatccacagccaagacgtgtctatcccgcactgcccagaggga
tggcgcagcttatggatcggctattcgttcctcatgcacacggccgctggcgctgaagga
gggggccagtctctcgtctcgccaggcagctgcctggaggatttccgggcaacccccttc
atcgaatgcaacggcgctcaggggacttgccactactttgccaacaagtacagcttctgg
ctcacgaccatcgacacccagtttcaacactcgccctcttcggatacgctgaaggcagga
ctcatccgaactcacatcagccgatgccaagtctgcatgaaaaatctgtaa
DBGET
integrated database retrieval system
