Gekko japonicus (Schlegel's Japanese gecko): 107113535
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Entry
107113535 CDS
T04299
Symbol
TRIM56
Name
(RefSeq) tripartite motif containing 56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gja04121
]
107113535 (TRIM56)
Enzymes [BR:
gja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107113535 (TRIM56)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107113535 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
107113535
NCBI-ProteinID:
XP_015270356
LinkDB
All DBs
Position
Un
AA seq
691 aa
AA seq
DB search
MAARASSLSEALSSGFLTCTICLEHLCQPKILPCLHTFCRDCLQQLASGREELQCPECRE
RVPLPAGVEGLKTNFFINGLLDLIRPAGRVDAPCSLCPLLGQDTSRCAVSRCLDCADNLC
QTCASGHRCSRLTHAHCIVDMEGYLSGEHDEEVRKRQASCCQEHSGEALRFFCTPCATAL
CRECRLGPHLEHPCLPLSEAAEARCPIIVGLLAGVEEKVGLIAQARARLEEQVEQLQAHA
GGVRGAMERTCSQAVQQLLALQEEVLAQLSGFVEERKKAAEVLRSELEFQEQVASSTAAF
ARKVLSLGRAVEIVSLEQMISERLRQLQSFSWEPLAFRLPHLAEHPNLQSLHGLFHLEFR
EEPPPGGPESANGSTPKGAKKKRRKSQQLLLLLPTAHHEAGRAPGQQKPSPPVEPPSLPP
ARPEAPPLTPKAVFSSSFWVKVPSDKKRPQVTGICPLGSGELLVADMQNRKLKRFSLQGE
FKGLVSVPSDVAPFSVAAVGGRVAFSAGSRLFLLSGEGGLLWQKALQLGQASHAVTAVGG
NRVVVSVAGHLELYDVEGRLVEKVVPGGSEERSLVFLASRKGGFVASDWYRRSLLVFGSQ
GQLVAERREEELDGCQPGAVCVDATGIIYVVLREQNRVLAFSQAGKPLGPFLTAEDSIDR
PRVATVTGDGRFAVALSNGTIHTFKIRYQSK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagagcctcctccctctccgaggccctctccagcggcttcctgacctgcacc
atctgcctggagcacctttgccagcccaagatcctcccctgcctccacacgttctgtcgc
gactgcctgcagcagctggccagcgggcgggaggagctgcagtgccccgagtgccgcgag
cgggtgccccttccggccggcgtcgagggcctcaagaccaacttcttcatcaacggcctc
ctggacctcatccgcccggcagggagagtggatgccccgtgcagcctttgcccgctgctc
ggccaggataccagccgctgtgccgtgtcgcgatgcttggactgtgccgacaacttgtgc
cagacttgcgccagcgggcaccgctgctcccggctcacccacgcccactgcatcgtcgac
atggagggctacctgtctggggagcacgacgaggaggtccgcaagcggcaggcctcttgc
tgccaggagcacagcggggaagccctgcgcttcttctgcaccccctgcgccaccgccctg
tgccgggagtgccgcctggggccccacctggagcacccctgcctgcccctgtcggaggcc
gccgaggcccgctgccccatcatcgtgggcctcctggcgggggtggaggagaaggtgggc
ctcatcgcccaggcccgggcccggctggaggagcaggtggagcagctgcaggcccacgcg
ggcggcgtccgaggcgccatggagcgcacgtgcagccaggcggtgcagcagctgctggcc
ctgcaggaggaggtcctggcccagctctcgggcttcgtggaggagaggaagaaggccgcc
gaggtgctccggtcggagctggagttccaagagcaggtggcctccagcacggcggctttt
gcccggaaggtgctgagcctgggccgggccgttgagatcgtctccttggagcagatgatc
tccgagaggctgaggcagctgcagagcttctcgtgggagcccctcgccttccggctgccc
catctcgcagagcacccgaaccttcagagcctccacggcttgttccacctggaattcagg
gaggagccccccccagggggcccggagagcgccaacgggagcacccccaaaggagcaaag
aagaagaggaggaagtcgcagcagctgctgctgctgctgcccaccgcccaccacgaagcg
gggagggcacccggccaacagaagccgagcccccccgtggaaccccccagcctgcctcct
gcacggccagaagcccccccactcacccccaaggccgtcttctcgagcagcttctgggtg
aaggtccccagcgacaagaagcgcccgcaggtgaccggcatctgtccccttggttccggg
gagctcctcgtggccgacatgcagaacaggaagctgaagaggttctcactgcagggggaa
ttcaaaggcctcgtctctgtgccgagcgacgtggcccccttcagcgtggccgccgtgggt
ggcagagtggctttctctgctggctctcggctcttcctcttgagtggcgagggtggcctc
ctgtggcaaaaggcccttcagctgggccaggccagccatgccgtgaccgcagtcgggggc
aatcgtgtggtggtgagcgtggcggggcacctggagctgtatgacgtggaggggcggctg
gtggagaaggtggtgcccggaggcagcgaggagcgcagcctggtcttcctggccagccgc
aaggggggctttgtggcctccgactggtaccggcgcagcctgctggtgtttggcagccag
gggcagttggtggctgagcgccgagaggaagagctggatgggtgccagccaggggccgtc
tgtgtggacgccacggggatcatctacgtggtgctgcgtgagcagaaccgggtcctggcc
ttctcccaggctggcaagccgctgggccccttcctgaccgccgaggatagcatcgaccgg
ccccgggtggccaccgtgacgggggacggacgctttgcagtggctctgagcaacgggacc
atccacaccttcaagatcagatatcaaagcaagtga
DBGET
integrated database retrieval system
