Gekko japonicus (Schlegel's Japanese gecko): 107113806
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Entry
107113806 CDS
T04299
Symbol
TRIM54
Name
(RefSeq) tripartite motif containing 54
KO
K10653
tripartite motif-containing protein 54
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107113806 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gja04121
]
107113806 (TRIM54)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107113806 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
RHH_9
Sina_RING
DUF5799
Prok-RING_4
UvrD_C
SpoIISA_toxin
Zn_ribbon_FGT1_2
CYP38_PsbQ-like
Motif
Other DBs
NCBI-GeneID:
107113806
NCBI-ProteinID:
XP_015270662
LinkDB
All DBs
Position
Un
AA seq
382 aa
AA seq
DB search
MNFAVGFKPMLGTSQSMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSTSVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHAKA
EQQLMCEEHEDEKINIYCLTCETPTCSMCKVFGAHKDCEVAPLTNVYKRQKGELSDGIAM
LVAGNDRIQAIISQMEEICKTIEDNGRRQKQHLCLRFDSLYSILEERKKELLQEIGREQE
EKVQRVRELIRQYGDHLEVSSKLVESAIQSMEEPQMAVYLQQSKELIKKITDMSKASMSN
RPEPGYENMDHFSINVEHVAEMLRTIEFHTDAAGEEAEVEGPGPEGGDATGEEERPEAAD
APEGTEDAGLRPKPASASHGQH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgccgtgggcttcaagccgatgctggggacctcgcagagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttcaccaagccggttgtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaacgacatcttccaggcctccaaccct
ctgtggcagtcacggggctccacttcagtgtcttccggaggccgattccgatgcccatcc
tgccgccacgaagtggtgctggaccgacatggcgtctacggcctgcagcgcaaccttctg
gtggagaatataattgatatctacaaacaggaatcatctcgacccctccatgccaaggcg
gagcagcagctgatgtgtgaggaacacgaggatgagaagatcaacatctattgcctgacc
tgtgagacccccacctgctccatgtgcaaagtctttggggcccacaaggactgtgaagtg
gcccctctgaccaacgtctacaaacgccagaagggggagctgagtgatggcatcgccatg
ttggttgcagggaatgaccggatccaggcaatcatctcacagatggaggagatctgcaaa
accatagaggacaacgggcggcggcagaagcagcacctgtgcctgcgctttgactccctg
tacagcatcctggaggagcgcaagaaagagctgctgcaggagatcgggcgagagcaggag
gagaaggtccagcgggtgcgagagctcatccgccagtacggggaccatctcgaggtctcc
tccaaactggttgagtcagccatccagtccatggaagagcctcagatggctgtctacctc
cagcaatccaaggagctgattaaaaagatcacagacatgtccaaagcatccatgagcaac
cgcccggagcctggctatgaaaacatggaccacttttccatcaatgtggaacatgtggct
gaaatgctgagaacaattgaattccatacagatgctgctggagaagaggctgaagtggaa
ggacctggcccagaaggtggcgatgctacaggagaagaggagcgcccagaagcagcggat
gcccccgaggggacggaagatgcggggttgagacccaagccagcaagtgcctcacatggt
caacactga
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integrated database retrieval system
