Gekko japonicus (Schlegel's Japanese gecko): 107113926
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Entry
107113926 CDS
T04299
Symbol
VPS18
Name
(RefSeq) VPS18, CORVET/HOPS core subunit
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04140
Autophagy - animal
gja04148
Efferocytosis
gja05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107113926 (VPS18)
04148 Efferocytosis
107113926 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107113926 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gja04131
]
107113926 (VPS18)
Membrane trafficking [BR:
gja04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107113926 (VPS18)
Hops complex
107113926 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
Vps39_2
zf-RING_16
zf-C3HC4_2
DUF2229
zf-RING_5
zf-RING_UBOX
zf-RING_11
DUF5600
zf-ANAPC11
zf-rbx1
COG6_N
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
107113926
NCBI-ProteinID:
XP_015270817
LinkDB
All DBs
Position
Un
AA seq
974 aa
AA seq
DB search
MASMRDDYQDSISNMASSQQIRSSLGIPHTGYVNARLEKETHIFNKQRIDFTPPEKINSL
VVSSNQLCMSLGKDIIFRLDLAKADEPNQVELGRKDDAKVYKLFLDHTGSHLVIALNTSE
CLYLNRNAQKVRPLSRWKGHLVESVGWNKFSGSETNTGPILVGTSQGHIYEAEISISEGG
LFGTTPDQYFRFIYNLEEEAGPAPVCCLEIERGVDGKCFIIATTRKRLFQFVGKVPEGAD
QQGFGPIFSMPLNHLPGFREFPASFGYSEIAFYTPKLRSSPNAFAWMMGNGVLYGSLDYG
RPDSILSDEQVWEYPCDVDISVNKPISIVLTQFHFLLLFPDQVKAVCTLNGQVVFQDVFL
DKFGSLTRMIKDPSYGQIWIHTEKVVFRYNVQRESRDVWKMYMNINKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLLKKLAGL
KPSEKTQTTLLTIWLTELYLNRLGMLEGDPSKQGLHVKARDNFRSFLGSPRNKDCLFNNR
ATIHELLASHGDTENMVHFAVLMHDYERVIAHHCQHDNYSAALKVLSKIKDEALFYKFSP
ILIQHIPKMVVEAWIEMGKQLDARNLIPALVNYSQCGSTVQISEAIRYLEFCVYELKETH
QAIHNYLLSLYAVCDPKSLLVYLENAGSNSDKIHCDLKYALRLCAEHGHHQACVHVYKVM
EMYEEAVDLALQVDVDMAKSCADLPEEDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
NLLKIEDVLPFFPDFVTIDHFKEAICNSLEAYNKHIEELKTEMEEATQSAKRIREDIQEM
RNKYGSVESQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQEVYPNLPAYKQAKLEDLQK
KLSATGQPSKSHHRPKDTDVSGQEKGQPSREQMKADIDDIVAAECVYCGELMIRSIDKPF
IDPQRYESEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatgcgggacgactaccaagactccatctccaacatggcctcttcgcagcag
atccgcagcagcctgggcatcccacacaccggttatgtgaatgctcggctggaaaaagag
acacatatttttaacaaacagaggattgacttcacccctcctgagaagattaacagcctg
gtggtctcctctaaccagctgtgtatgagtcttgggaaagacatcatttttaggcttgac
ctggccaaagcagatgagcctaaccaagtggagcttggacgaaaagatgacgccaaagtt
tacaagctgtttctggaccacacaggttctcaccttgtcattgccctgaacaccagtgaa
tgcctctatctgaaccgaaacgctcagaaggtgcgacccctgtctcgctggaaaggtcat
ttggttgagagtgtgggctggaacaagttctcgggctcggagaccaacacaggcccaatt
ttggtggggacatcccaaggccacatatatgaggctgagatttctatcagcgagggcggc
ctctttggcactacccctgaccagtacttccgcttcatttataacttggaggaggaggcg
gggccagccccagtgtgctgtctagagatagaacgaggagttgatgggaaatgttttatc
attgccaccactcgtaagagactgttccagtttgtcggtaaggttccagaaggggctgat
caacaaggctttggacctatattcagcatgcctttgaatcatctgcctgggttccgtgag
tttccagccagctttggctacagtgagatagcattctacacgccaaagcttcgctcttct
ccaaatgcatttgcttggatgatgggaaatggtgtcctgtatggatcactggactatgga
cgtcccgactctattctgagtgatgagcaagtctgggaatatccttgtgatgtagacatt
tccgtcaacaagcccatctccatagtgctcacgcagttccatttcctgctgctgtttcct
gaccaggtgaaggctgtctgcactctgaacgggcaagttgtcttccaggatgtgttcctg
gacaagtttggctcattaacacgaatgatcaaagatccctcgtatggacaaatctggatt
cacacagaaaaggtggtgtttcggtacaatgtgcagcgagagtcccgagatgtgtggaag
atgtacatgaacatcaacaagttcgatttggccaaagagtattgcaaggaccgtcccgaa
tgtctggatattgtcctggcaaaggaggcagaacactgcttccagaacaagaggtacctt
gacagtgctaagtgttacgctttgacccaaaattattttgaggagattgcccttaaattt
atcgaagccaaacaggaggaagcgttgatggagttcctccttaagaagctggctggcttg
aagccttctgaaaagactcagaccactctgctgaccatctggctaacagaactctatttg
aatcgcctgggaatgctggaaggggatccatcgaaacaaggcctccacgtgaaggctcgg
gacaatttccgcagctttttgggtagccccagaaataaagactgcctgttcaacaaccgg
gcaaccattcatgagctgctagccagccacggggacacagaaaacatggtgcactttgct
gtcctcatgcatgactacgagcgggtgatcgcccatcactgccagcatgacaactacagt
gcagcgctaaaagtcttgtccaaaatcaaggacgaggcccttttttacaagttctctcct
atcttgatccagcacatccccaagatggtggttgaggcctggattgaaatgggcaagcag
ttggatgcgaggaacctcatcccggcccttgtcaactacagtcaatgcggcagcactgtg
cagatcagtgaagccattcgctacctggagttctgtgtgtacgagctgaaggaaactcat
caagccattcataactacctgctgtcactctatgctgtctgtgacccgaaatccctgttg
gtctatctggaaaatgcaggatccaactcagacaagatccactgtgacctgaagtatgcg
ctccggctgtgtgcagaacatggccaccaccaagcttgtgtccatgtgtacaaagttatg
gagatgtatgaggaggctgtggatctagccttgcaggtggacgtagatatggcaaagtcc
tgtgcggatctcccggaagaagatgaggagctgcggaagaagctgtggctgaaaattgct
cggcacgtggtccaggaggagaaggacgtcaagaaggccatggcctgcctttccagctgc
aacctgttgaagatagaagatgtcctgccgttcttcccagactttgtcactattgaccac
ttcaaggaagccatttgcaactctctcgaagcctacaacaagcacatagaagagctgaag
acagagatggaggaggcaacgcagagtgccaagaggattcgggaagacattcaggagatg
agaaataaatatgggtctgtggagtctcaggaaaaatgtgcagcttgtgactttccactt
ttaaaccgccccttttatctttttctctgtggccacatgttccactatgattgtcttctc
caggaggtttatccaaatttgcctgcctataagcaggctaaactggaggatcttcagaag
aagctttcagccacaggccaaccttctaagtcccaccatcgccctaaggacacggatgtg
tctggccaagaaaagggccagcccagtcgggagcagatgaaagctgacattgatgacatt
gtggcagctgaatgcgtgtactgtggagagctaatgatccgatcaattgataagcctttc
attgatccacagagatatgaatcggagatgcagagttggctgtag
DBGET
integrated database retrieval system
