Gekko japonicus (Schlegel's Japanese gecko): 107114065
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Entry
107114065 CDS
T04299
Symbol
NUP50
Name
(RefSeq) nucleoporin 50
KO
K14295
nuclear pore complex protein Nup50
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107114065 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107114065 (NUP50)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107114065 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
MRVI1
Motif
Other DBs
NCBI-GeneID:
107114065
NCBI-ProteinID:
XP_015270973
LinkDB
All DBs
Position
Un
AA seq
465 aa
AA seq
DB search
MAKRVAEKELTDRNWDQEEETEEVKNMGTFSMASDDVLKNRAIKKAKRRNMGLESDSGGA
FKGFKGFSLSSGAAGFSGFGNGTRTKPFGLSNGSSSVTNTSSLISFKAAAETQTTLTSSV
VSSGSMNIPGAEKKPASLETNGESQPPPPSGSTQRPACSSDVYHKQLAALNCSVRDWIVK
HVNANPLCDLSPIFRDYEKYLAEIEQHGISSDSGSESDSNKAVGSQPGPTFSSSNLQQSS
PFFFSSNKSEDLPGKSMELEKKPEPKLGSKSAVTFTFGKSVNSSGLNSSALPNFSFSSGS
ASLFGKDASQGSVPSFPSKASETPMESASNEDKGEEEEEPPKVVVNEIKEDDAFYSKKCK
IFYKKDNEFKEKGVGTLHLKPAGNQKTQLLVRADTNLGNILLNILVPPNMPCSRTGKNNV
LVVCIPNPPIDEKNATVPVPMLIRVKTSEDANELHKILTEKKEEA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctaagagggtggcagagaaagagctgacggacaggaactgggatcaagaagaagaa
acagaggaggtaaaaaatatgggaactttctcaatggccagtgatgacgttttgaagaac
cgagcaattaagaaggcaaagcgtagaaatatgggattagagtctgacagtggaggagct
tttaaaggttttaaaggtttttctctgtcttctggagctgctgggttttctggctttggc
aatggcaccagaacaaaaccctttggactctccaatggtagcagcagcgttacaaacact
tcttcattgatcagcttcaaggcagctgctgaaacacaaacaacattaaccagctctgtg
gtatccagtggctcaatgaatattccaggggctgagaagaaacctgcaagcctagaaacg
aacggtgagagtcagccgccgccgccctcgggatccactcagaggccagcgtgcagctct
gatgtttaccacaagcagctggctgctctcaactgttccgtgcgtgactggatagtaaag
catgtaaatgccaatccgctctgtgacttgagcccaatcttcagagactatgaaaaatac
ctagccgagatagagcaacatgggatcagcagtgacagcggctcggaaagcgatagtaac
aaggcagtcggaagtcagccgggccccacgttcagcagttcaaatctccaacagagctca
ccatttttctttagcagcaacaagtctgaggatttgcctggaaagagtatggaattggaa
aagaaaccagaaccaaaactaggctctaagtcagcagtcacgtttacttttggcaagagc
gtcaacagctcagggctgaattctagcgcgttgcctaatttctcattctcttctgggagc
gcgagtttatttggaaaagatgcaagccagggcagcgttccttcgtttcccagcaaggcg
tcagagacaccgatggaaagtgccagcaacgaagacaaaggagaggaggaggaggagcca
ccaaaagttgttgttaatgaaataaaggaagatgacgccttctactcaaagaaatgtaaa
atcttctacaagaaagacaatgaatttaaagaaaaaggtgtaggaacattgcacttgaag
cctgcaggaaatcagaagactcagctgttagtacgagcagacacgaatttaggcaacatc
ctgctgaacattttggtgccccctaacatgccgtgctcaaggacagggaagaacaacgtc
ctcgttgtctgcattccaaacccacccatcgacgagaagaacgccaccgtccctgtccct
atgctgatccgggtcaaaacgagcgaggatgccaacgaactgcacaagatcctgacggag
aagaaggaggaggcctga
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