Gekko japonicus (Schlegel's Japanese gecko): 107114125
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Entry
107114125 CDS
T04299
Symbol
PRDM1
Name
(RefSeq) PR/SET domain 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gja03000
]
107114125 (PRDM1)
Transcription factors [BR:
gja03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
107114125 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
107114125
NCBI-ProteinID:
XP_015271048
LinkDB
All DBs
Position
Un
AA seq
780 aa
AA seq
DB search
MKMDMEDADMTLWTEAEFEEKCTYIVNDHPADSSTETGTIMQAESSLPRNLIFKYAGNCK
EVIGVISKEYIPKGTRFGPLVGEIYTNDTVPKNANRKYFWRIYSDGELHHFIDGFNEEKS
NWMRYVNPAHSVQEQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFADRLHYPSTGDL
VMMNITHSHVNPKQQTNSKDELYQKNVPKREHSVKEILKNDSSHPKGKDLFHTHISSHIE
EKDFEGLRKNCSPERPFYPRIVYPIRPHIPEDYLKAYGFERPSYIAHSPIQSSTTPSPSA
RSSPDQSLKSSSPHSSPGVTVSPLAPVSQEHREPYPYLNGPYSSEGLGSYSGYATSNHVS
QAFIPYNPPYHKFLLPPYNMSCGSLSTLSSISNFNLLPRMYPFYSNIFNGGSLSSHMLNP
SSLPSSLPSDGSRQLLPPDHRRDFLIPAHNSAFSITGAAASMKDKQCSPTSGSPTAGTAA
TSEHIMQPKPTSAGLAATSSEEAMNLIKSKRNMTGYKTLPYPLKKQNGKIKYECNVCSKT
FGQLSNLKVHLRVHSGERPFKCTTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSST
SNLKTHLRLHSGEKPYQCKLCPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHRCSLK
VHLKGNCPVVPASNLSTEDLNRINEEIEKFDISDSADRLDDVEDNVDMACVVEKEILAVL
RREIEGASLKATLQRNPGNVLIASGCNLYESSDIVKLPHGHPLSRVPVKVKQETVEPMDP
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacatggaggatgctgacatgactctatggacagaggctgaatttgaagag
aagtgtacatatattgtaaatgatcaccccgcagattccagcactgaaactggcaccata
atgcaggctgagtcttccttgccaaggaatttgatcttcaaatatgctggaaattgcaaa
gaggttattggagtcattagcaaagaatatatccccaaaggaacacgttttggacctctg
gttggagagatctataccaatgacactgttcctaaaaatgcgaacagaaaatatttttgg
cggatctactctgatggtgagcttcaccacttcatcgatggatttaatgaggaaaagagc
aattggatgcgctacgtaaacccagctcattctgttcaggagcagaatctggctgcttgt
cagaatggaatgaacatttacttctataccatcaaaccaatccctgccaaccaggaatta
cttgtgtggtattgccgggactttgcagacaggttgcactatccttctactggagacctg
gtgatgatgaatatcacacacagccatgtaaatccaaagcagcaaactaatagcaaagat
gaactttatcagaaaaatgtgcccaaaagagagcacagtgtgaaggaaatcctgaaaaat
gattctagtcatcctaaaggaaaagacttattccacacccacatttcatcacatattgaa
gaaaaagactttgaaggcttaagaaaaaactgtagccccgaaaggcctttctatccacgc
attgtctacccaatccgacctcatatcccagaagattacctgaaggcctatgggtttgag
aggcctagttacattgcccattcacccatccagtcttctaccacaccaagcccctcagca
agaagtagcccagaccaaagtttaaaaagctcaagtcctcacagcagcccaggagttaca
gtttcacccttggctcctgtgtctcaagagcacagagaaccttatccatacttgaatgga
ccctatagctcagaaggtttaggttcgtattctggatatgcaacctccaaccatgtctca
caagcctttataccttacaatcccccctaccataaattcctgttaccaccatacaacatg
agctgtggcagcctgagtactttgagcagcatcagcaatttcaaccttctcccaaggatg
tatcccttctacagcaacatattcaatggaggaagcctttctagtcatatgctgaatcca
tcttcccttccaagttcattgccatctgatggaagtcgccagctgttgccacctgaccac
cgaagggacttccttatccctgcacataacagtgccttctccatcacaggagctgctgcc
agcatgaaagacaaacagtgcagcccaaccagtgggtcacccacagctggcacggcagct
acttcagaacatataatgcaacctaaacctacctcagcagggctggctgccaccagcagt
gaagaagccatgaatctcatcaagagcaagcgtaatatgactggttacaaaacccttcca
tacccactgaagaaacagaatgggaagataaagtatgaatgcaacgtctgctcaaaaacc
tttggccagctctctaatctgaaggtccaccttcgagtacacagtggagaaagaccattc
aaatgtactacatgtaataaaggatttactcagttggctcacctccaaaagcattatctg
gtacacacaggagaaaaacctcatgagtgtcaggtttgccataaacgattcagcagcaca
agcaacctgaagacacatctgcggctccactctggagagaagccttatcagtgcaaactc
tgccctgctaaattcacccagtttgtgcacttgaaactgcacaaacgtctccacaccaga
gagcgcccgcacaagtgtatccactgccataagagctatatccaccgctgtagcctcaag
gtccaccttaagggcaactgccctgttgtccccgcatctaacctttccacagaggacttg
aatcggatcaatgaagaaatagagaaatttgacatcagtgacagtgcagacaggttggac
gatgtcgaggacaatgttgacatggcatgtgtagtcgaaaaagaaatattggctgtgctt
agaagagagatagaaggagccagtcttaaagcaacattgcagaggaacccggggaatgtg
ctgattgcctcaggatgtaatctttatgaatcatcagatattgtgaagttgcctcatggt
catccactatctcgggtacctgtaaaggtcaagcaagaaacagttgaaccaatggaccct
taa
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