Gekko japonicus (Schlegel's Japanese gecko): 107114170
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Entry
107114170 CDS
T04299
Symbol
SCAF4
Name
(RefSeq) SR-related CTD associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gja03021
]
107114170 (SCAF4)
03041 Spliceosome [BR:
gja03041
]
107114170 (SCAF4)
Transcription machinery [BR:
gja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107114170 (SCAF4)
Spliceosome [BR:
gja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
107114170 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
XMAP215_CLASP_TOG
Motif
Other DBs
NCBI-GeneID:
107114170
NCBI-ProteinID:
XP_015271095
UniProt:
A0ABM1KBK8
LinkDB
All DBs
Position
Un
AA seq
1046 aa
AA seq
DB search
MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFCKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGASSAASVPEDTTNNEGSPPPSTTIPSEPPQVASNSVPTVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPVIDNNMMTQVQAITAQLQTTTTQP
SEQKHDFPVPEQKTSFDKKLLDRFDYDDEPEAVEESKKEDLSPSPSVSQQAFGFPGEGIQ
QPVYPQLPNIDQFQQRMLGMQQDPMHHQVPLPPNGQMPSYGLLPTPQFPPMAQPVIQSSP
PVQPSFQPSFTAQSESHIQKAHQQEMEVDQPPVQEVKRHESRKSRSRSASRSPKRRRSRS
GSRTRRSRHRRSRSRSRDRRRHSPRSRSQEKRERERERERRTKGLPPIKPETVSVCSTTL
WVGQLDKRTSQQDVGSLLEEFGPIESINMIPPRGCAYIVMVQRQDAYRALQKLSRGNFKA
NQKPIKIAWALNKGIKPDYKQYWDVELGVTYVPWSKVKPEDLESSCEGGMLDNETLSPEW
KGIPKKSENQVAQNGGAVGEAAHNEQTSPVAKTLPVQMPVPMPAPITVPPPQVPPHQPGP
PMVGTLQPPTFTPPLGIPPPGFGPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPINPP
VSVPPVSIPPSPGVNIPNSSVANMNEDTTKDSSVGNPIPTVVSGSRANAENVDSSKGYPN
APPPATSTSMPAPVTQPVPLLGTQGATPSPVIGLQAPSTGLLGARPGMIRHMPPHMMHRG
PPPGPGGFGMPPPHGMKGPFPPPGHFVRPGGPDDNRDGRQFRNDRQPFNPNRDQERFGRR
SFGNRIENERERYGNRNDDREHERLGNRERREWGGRRSPERDRHRDLEERNRRFSGQRER
DSRDRESRREKDENRGKEKPELTDRVDGIKNHESQSGKAENTDTVSELKGESEPTDAKPA
EELTSEATSSLEQPEKSTGSVVETPR
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaacgccttcaaccaggagctcttctcattgatggagatgaagcctcct
atttctcgtgcgaagatgattctcattactaaagctgccattaaagctattaagctttac
aaacatgtagtccagattgtagagaagtttattaaaaagtgtaaaccagaatataaagtt
cctggattgtatgttattgactctattgttcgtcagtctcgtcatcaatttggaacagat
aaggatgttttcgggccaagattctgtaaaaatataactgctacattccagtatttatat
ctctgtccatcagaagacaagagtaagatagttcgtgtcctcaatttatggcagaaaaat
ggagtgtttaaaatagaaataattcagcctctcctggatatggcagcaggagctagcagt
gccgcttcagtgccagaagacaccactaataatgaaggttccccacctccttccacaaca
attccatctgagcctcctcaagttgcttctaattcagtacctactgtgccacaattgccc
agttctgatgcctttgcagctgtagctcagttatttcagacaacacaaggacagcagctc
caacagattcttcagacttttcagcagcctccaaaacctcagtctccagtgatagataac
aacatgatgactcaggtccaggcaattactgcacagttgcagactacaacaacacaacca
tcagaacaaaagcatgattttccagtaccagagcaaaagacatcttttgataagaagctg
ctagatcgatttgactatgatgatgagccagaagccgtggaagagtcgaagaaagaggat
ttgtcaccttctccatcagtctctcagcaagcatttggatttccaggtgaaggcatacag
caaccagtttatccacaactcccaaatatagatcagtttcagcaacggatgctgggaatg
caacaggatcctatgcaccaccaggtccctctccctccaaatggtcaaatgccaagttat
ggccttctacctacaccacagtttcctcccatggctcagcctgtgatacagtcttcgcct
ccagtgcagccatctttccaaccttcttttacagcacaaagtgaatcccatatacagaaa
gcacatcagcaggaaatggaagtggatcaacctcctgttcaagaagtaaagaggcatgag
agcagaaagtcaagatctagatctgcatcaagatcacccaaaaggagaagatcaaggtct
ggttctcggactcgaagatcacgccatcgtcgttctcgttcccgatctcgggacaggcgc
cgccattctcctaggtctcgatcccaggaaaagcgtgagagagagagagaaagagagcgc
agaacaaaaggcctgcctcctatcaaaccagaaactgttagtgtgtgcagtactacactt
tgggtaggacaactagacaaacgaacatcacagcaggatgttggtagtcttctagaggag
tttggccctattgaatccataaatatgataccaccaagaggatgtgcctatattgtaatg
gtgcagagacaagatgcataccgcgccctgcaaaaactcagccgtggaaactttaaagcc
aatcagaaacctataaagattgcatgggctttaaataaaggaattaaaccagactataag
cagtactgggatgtagaattaggtgttacctatgtaccatggagtaaagttaagcctgaa
gacctggaaagttcttgtgaaggaggaatgttggacaatgaaacacttagtcctgaatgg
aaaggaattcctaaaaaatcagaaaaccaagtagcccagaatggaggagcagtaggtgaa
gctgcacacaacgaacaaacatcacctgtagctaaaactttaccagttcaaatgcctgtt
cccatgcctgctccaataacagtgcctccgccacaggtcccaccacatcagcccggtcct
ccaatggttggtacacttcagccgcctacatttacccctcccttagggattccacctcct
ggatttggtcctggagttcctccacccccacctccaccgtttttgcgtcctggcttcaac
ccaatgcatttacctccaggatttctgcctcctggaccaccaccacctattaatcctcca
gtttcagttcctccagtctccattcctccttctccaggagtaaatatcccaaactcttct
gtggccaatatgaatgaagacactacaaaagactcttcagtgggaaaccccattccaaca
gtagtttcaggatctagagcaaatgctgaaaatgtagatagttccaaaggatatccaaat
gctcctccaccggcaacttctactagcatgccagctccagtcacccaacctgtcccactc
cttggtactcaaggagctacacctagtccagtgatagggcttcaggcgccttctactggt
cttcttggtgcacgacctggtatgatacggcacatgcctccccatatgatgcatagaggt
ccacctccaggcccaggaggctttgggatgcctccacctcatgggatgaagggccctttc
ccaccacctggtcactttgtgaggcctggtggaccagatgataatagagatggaaggcaa
tttaggaatgataggcaacccttcaatccaaacagagaccaggaaagattcggaaggagg
tcttttggaaatcgaatagaaaatgagcgtgagcgttatggtaaccgcaatgatgatagg
gaacatgagcgacttggtaatcgtgaaaggagagaatggggaggaagaagaagccctgaa
cgtgatagacacagagacttggaggaaagaaataggcgcttcagtggacagagagagaga
gattctagggatagggagtctcgcagagaaaaggacgaaaatcgaggaaaggagaaacct
gagttgacagacagggtagatggcatcaaaaaccatgaatcccagagtggcaaagcggaa
aacacagacactgtttcagaacttaaaggggagtctgaacccacagatgcaaagcctgct
gaagagttaacatcggaggctacctcatctcttgaacaacctgaaaagtctactggctca
gttgtagagacacctcgctag
DBGET
integrated database retrieval system
