Gekko japonicus (Schlegel's Japanese gecko): 107114212
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Entry
107114212 CDS
T04299
Symbol
EIF4A3
Name
(RefSeq) eukaryotic translation initiation factor 4A3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03013
Nucleocytoplasmic transport
gja03015
mRNA surveillance pathway
gja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107114212 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
107114212 (EIF4A3)
03015 mRNA surveillance pathway
107114212 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107114212 (EIF4A3)
03041 Spliceosome [BR:
gja03041
]
107114212 (EIF4A3)
03009 Ribosome biogenesis [BR:
gja03009
]
107114212 (EIF4A3)
03012 Translation factors [BR:
gja03012
]
107114212 (EIF4A3)
Enzymes [BR:
gja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107114212 (EIF4A3)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107114212 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
107114212 (EIF4A3)
Spliceosome [BR:
gja03041
]
Complex C
Other components
EJC/TREX
107114212 (EIF4A3)
Ribosome biogenesis [BR:
gja03009
]
Eukaryotic type
90S particles
Helicases
107114212 (EIF4A3)
Translation factors [BR:
gja03012
]
Eukaryotic type
Initiation factors
eIF-4
107114212 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
107114212
NCBI-ProteinID:
XP_015271139
LinkDB
All DBs
Position
Un
AA seq
410 aa
AA seq
DB search
MSGATGGATGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKP
SAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQ
IQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAI
KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV
KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN
FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY
IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggctacgggcggcgcgacgggctcggcccggaaacggctgttgaaggaggag
gacatgaccaaggtggagttcgagacgagcgaagaggtggacgtcacccccaccttcgac
actatgggcctgcgcgaggacctgctgcgcggcatctacgcctacggttttgagaagcct
tcagctatccagcaaagagcaatcaaacagatcatcaaagggagagatgtgattgcgcaa
tcacagtctggaacaggcaagacagcaacattttccatctctgttctacagtgtctggac
atccaggttcgtgaaacccaagcgttgattttggcacctactagggaattggccgtacag
attcagaaggggcttcttgctcttggtgactacatgaatgtccagtgtcatgcttgtatt
gggggaaccaatgttggtgaggacatccgaaaactggattatggacagcatgtggttgct
ggcacaccagggcgtgtatttgatatgattcgtcggagaagtctaaggactcgtgctatc
aaaatgttagttctggatgaagctgatgagatgctgaataaaggttttaaagaacagatc
tatgatgtgtacagataccttcccccagcaacacaggtggttctgatcagtgccactttg
ccacatgagatcttggagatgaccaacaaattcatgactgaccccatccgcatcctggtg
aaacgtgatgagttgactcttgaaggaatcaaacagttttttgtggctgtggaaagagag
gaatggaaatttgataccttgtgcgacctatacgacactctcactatcacacaggcagtc
atcttctgtaataccaaaaggaaggttgactggctaactgagaagatgagagaagctaac
ttcactgtttcatcaatgcatggtgacatgccccagaaggagagggaatccattatgaaa
gaattcagatcaggggcaagccgagtccttatttccacagatgtttgggccagaggcttg
gatgtacctcaggtgtccttaattattaactatgatctacccaacaacagagaattgtat
atacacaggattggtagatcaggtcgctatggccggaaaggtgttgccatcaactttgta
aagaacgatgacattcgtattctgcgagacattgagcagtactattctacccagattgat
gaaatgcccatgaatgttgctgatcttatttga
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