Gekko japonicus (Schlegel's Japanese gecko): 107114600
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Entry
107114600 CDS
T04299
Symbol
POLR1B
Name
(RefSeq) RNA polymerase I subunit B
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107114600 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gja03021
]
107114600 (POLR1B)
Enzymes [BR:
gja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107114600 (POLR1B)
Transcription machinery [BR:
gja03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107114600 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
107114600
NCBI-ProteinID:
XP_015271623
LinkDB
All DBs
Position
Un
AA seq
1134 aa
AA seq
DB search
MEAACKWRDLPDSPSLKHLTEPSYGLVKEQQLSALQEVTRAHIESFNHAVGEGLYRAVQA
IPPLEFAFKHDRITLAIIGAVISPPMVPKGSICKELKVYPAECRGRRSTYRGKLMADISW
SLNGSPKGIIKQSLGNIPIMVKSKLCNLYGLSPKELIEHHEEEEEMGGYFIINGIEKIIR
MVIMPRRNFPLALIRPKWKSRGPGYTQYGVSMHCVRDEHTAVNMTLHYLESGTVMVNFIR
QKELFFIPLGFVLKALVNFSDFQIFQELMKGKEEDTFYRNCVCQMLRLVVEEGCITQRQV
LNFLGQRFRVKLDLPEWHTSEQVGEFLFDQCICIHLKTNAEKFYLLCLMTRKLFTLAKEG
CMEENPDSLMNQEVLTAGQLYLMFLKEKMEAWLQSVKIALEKKAQKSNVTINSESMMKIV
GLGTDFTRMFEFLLATGNLRSKTGLGMLQSSGLCVMADKLNFVRYLSHFRCVHRGSDFLK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTATCEIVTQPSYTISLPPLLCSFGVT
PVDGTPSQSYSECYPVMLDGSLVGWIEKDLAPGLVDTLRYFKMMQEKRIPVWTEVVLIPI
TGKPSLYPGLFIFTTPCRMMRPVQNLALGKEELIGTLEQVFLNIAVSEDEIVPGVFTHQE
LLPHSMLSVVASFIPFSDHNQSPRNMYQCQMSKQTMGFPLLTFQNRSDDKLYRLQTPQSP
LVRPSMYDYYNVDSYPIGTNAIVAVISYSGYDMEDAMVVNKASWERGFAHGSIYKSEYID
LAEKVKEGSENLVFGIGRDSPNPLKNLDADGLPYIGTKLEYRDPYYSYLNLSTGESFVIY
HKNRETCYVDNIKICSNDTGTGRFKSVCITLRIPRNPTIGDKFASRHGQKGILSRLWPTE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALA
HFGEMLKAAGYNYYGTEKMYSGVSGVELETDIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFHCSDRSVAHVCVKCGSLLSPL
LKPPPLGSTTRIRQYICTICERSDTIETIAVPYVFRCFVAELAAINVKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgcgtgcaagtggcgggatttgccggattcccccagccttaagcacttgacg
gagccgagctatgggctggttaaggaacagcagctctcggcgctgcaggaagtgacacga
gcgcacatcgagtccttcaaccatgccgtgggcgaagggctgtaccgggcagtacaggct
attccacctctagagtttgcatttaagcatgatcggatcactttggcaattattggggct
gtgatcagtccacctatggtaccaaagggcagtatatgtaaagaactgaaagtttaccca
gcagaatgcagggggcgcagaagcacctaccgtgggaaactgatggctgatattagctgg
tcattgaatggctcccctaaagggattattaagcagtcccttggaaatattccaattatg
gtgaagtccaagctatgcaatctctatggcctttctcccaaagaactaatcgaacaccac
gaggaagaagaggaaatgggaggctatttcataattaatggtatagaaaagataattcga
atggtaatcatgccaaggcgcaacttcccccttgcactgataagaccaaagtggaaatcc
agaggccctggctacacacaatatggtgtctcaatgcactgcgttagagatgagcacact
gctgttaacatgacccttcattatcttgaaagtggcacagtgatggtgaacttcattcgt
cagaaagaattgttctttatcccactgggattcgtgctgaaggcattagttaatttctca
gatttccagattttccaagagttgatgaaaggaaaagaagaagatactttctacagaaac
tgtgtgtgtcagatgctgaggctagtggttgaagaaggctgcatcacgcagagacaggtt
ctgaacttcctgggtcagcgcttcagagtgaaactggaccttcccgagtggcacaccagt
gaacaagttggagaattcctgtttgaccagtgcatctgcatacacctgaaaaccaacgct
gaaaagttctacttgctgtgtctcatgacccggaaactgtttactttagctaaagaaggc
tgcatggaagagaatcctgacagtttaatgaatcaagaagtgctcactgcaggacaactt
tacctcatgtttttaaaggagaagatggaagcttggttacagtccgttaaaatagcctta
gaaaagaaagctcagaagtcaaacgtaacaattaattcagaaagcatgatgaagattgtt
ggcctaggaacagattttacaaggatgtttgaattcctccttgccactggtaatctgcga
tctaaaaccggtctggggatgttgcaaagctctggcctgtgtgtgatggcagacaagctg
aacttcgttcgctacctctctcatttccgctgcgtgcacagaggttctgattttctcaag
atgcgaaccacctcagtgcgcaagttgctgccggagtcgtggggttttctatgtcctgtg
cacaccccagatggggaaccctgtggcttgatgaatcacatgacagctacatgtgaaata
gtaacacagccttcatacacaatatccctgccacctttgctttgctcattcggtgtcact
ccagttgatggtacgccaagccagtcctattcagagtgttaccccgttatgttagatggc
tctttggtgggctggatagagaaggatctagctcctggtcttgtagacacactaagatat
tttaagatgatgcaagaaaagagaattccagtctggacagaggtggtccttatcccaata
acagggaaacccagcctgtacccagggctcttcattttcactacaccgtgtaggatgatg
cgtcctgtacaaaacttggccttggggaaagaagaattgattggcaccctagagcaggtc
ttcttaaacattgctgtgtctgaggatgaaattgtacctggcgtgttcactcatcaggag
ctccttccccatagcatgttaagcgtagtagcaagtttcattcccttctcggaccataac
cagagtcccagaaacatgtaccagtgtcagatgagcaagcaaactatgggctttccacta
ctgacttttcagaaccggtcagatgacaaactctaccggcttcagacccctcagagcccc
ttggtgcggccatccatgtatgattattacaacgtggactcttacccaattggtacaaat
gcaatcgttgctgttatctcctacagtggctatgacatggaagatgcaatggttgtaaac
aaagcttcatgggagagagggtttgctcatggaagtatctacaagtcagagtatattgat
cttgctgaaaaagtaaaggaaggatctgaaaatctggtttttgggattggtcgcgatagc
ccaaatcctttgaagaatttggatgctgatggtctgccctacatcgggaccaagcttgaa
tacagggacccttattacagctatctgaatctcagcacaggggaaagctttgtgatctac
cataagaacagggaaacctgttatgtggataacatcaaaatatgtagcaatgacacagga
actggaagattcaaaagtgtttgcatcactctgagaatcccgcggaatccaactattggg
gacaaatttgccagccggcacgggcagaaaggcatcttgagccggctgtggccaactgag
gacatgccatttacagaaagcggaatggtgccagacattctcttcaaccctcatggcttt
ccatcccgaatgaccattggcatgttaattgagagcatggcagggaaatcggcagcgctg
cacgggctctgccacgatgccaccccattcacattttctgaggagaactctgccctggct
cactttggtgagatgctgaaggctgctggctacaattactatgggactgagaagatgtac
agtggcgtcagtggagtagagctggaaacggacattttcattggagttgtgtactaccag
cgcttgagacacatggtctctgacaagtttcaggttaggactacaggggccagagacaaa
gtcaccaaccagcccattggaggaaggaacgttcaaggaggcattcgctttggagagatg
gagcgggacgcattgttggctcatggaacatccttcttgctgcacgaccgcctcttccac
tgctccgatcgctcagtggctcatgtgtgcgttaaatgtggcagtttgctttcccctctg
ttgaaacctccacctcttgggtccaccacccgcattaggcagtacatttgtaccatttgt
gagcggagcgataccatagaaacaattgctgtgccttatgtcttccggtgttttgtggca
gaacttgcagccattaatgtaaaagtgaaacttgatgtgaaataa
DBGET
integrated database retrieval system
