Gekko japonicus (Schlegel's Japanese gecko): 107115135
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Entry
107115135 CDS
T04299
Symbol
DHX15
Name
(RefSeq) DEAH-box helicase 15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107115135 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gja03041
]
107115135 (DHX15)
03009 Ribosome biogenesis [BR:
gja03009
]
107115135 (DHX15)
Enzymes [BR:
gja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107115135 (DHX15)
Spliceosome [BR:
gja03041
]
Complex A
U2 snRNP components
U2 related factors
107115135 (DHX15)
Complex B
107115135 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107115135 (DHX15)
Ribosome biogenesis [BR:
gja03009
]
Eukaryotic type
90S particles
Helicases
107115135 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
DUF3915
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
107115135
NCBI-ProteinID:
XP_015272248
LinkDB
All DBs
Position
Un
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYASSKKRVASDGKDRDRERDRDDRSKDRDRDRDRERERDKEKDFPPPA
NSALIASVGLPTLKPTVLPQGINPFTNLPHTPRYYEILKKRLQLPVWEYKERFTDILIRH
QSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPKKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCDYSCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHA
FKQNHESVQWCYDNFINYQSLMSADNIRQQLSRIMDRFNLPRRSTDVTSRDYYINIRKAL
VTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYTQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctcgacctgggggacgactacgcctccagcaagaagcgcgtc
gcctccgacgggaaggatcgggatcgtgaacgggatcgcgatgaccgctccaaagacaga
gacagagaccgagatcgtgagagggaaagagataaggaaaaggatttcccccctccagcc
aattctgcactcattgctagtgttgggttgccaactttaaagccaactgtactcccacag
ggtataaacccgttcacaaacctaccacacacacctcgctattatgagatcctaaagaaa
cggcttcagcttcctgtctgggagtataaggaaaggtttactgacatcttgatcaggcac
cagtcttttgtacttgttggggagacaggttctggtaagacaacgcagatccctcagtgg
tgcgttgactacatgcgatcactgccggggccgaagagaggagtggcatgtacccagccc
aggagagttgccgcaatgagcgtggcgcagcgggttgccgacgaaatggatgtgatgttg
ggccaggaagtgggttactccattcgatttgaagactgcagtagtgcaaaaactattctc
aagtacatgactgatggtatgttactgcgtgaagctatgaatgatcctttgctggaacgc
tatggagtaataattcttgacgaagcccatgaaagaactttggctaccgatattttgatg
ggagttttgaaagaggtcgtaaggcagaggtctgacttaaaggttatagttatgagtgct
actctagatgccggcaagtttcaaatttattttgataactgtcctctcttaactatccct
ggacgtacgcatcccgtggagatcttttatactccggaaccagagagggattaccttgag
gcagctattcgtacagtaatccagattcacatgtgtgaagaggaggaaggagaccttctt
ctcttcctcaccggccaagaggaaatagatgaagcctgcaagagaataaagcgtgaaatt
gatgatctgggtccggaagttggcgatattaaaataattccattatattcgacgcttcca
ccacagcagcagcagaggatttttgagccgcccccgccaaaaaaaccaaatggcgccata
ggacgaaaggtggttgtatctactaatatcgctgagacttcattaacaatagatggcgtg
gtgtttgtcattgatcctggatttgctaagcaaaaggtgtacaatcctcgtataagagta
gagtctctcttggtgactgcaataagcaaagcttccgctcagcagagggctggccgtgct
ggtcgtactaggccaggaaaatgttttcgactatatacagagaaggcctacaaaactgag
atgcaggacaacacctatccggagattctgagatctaatttgggttctgtggtattacag
ctgaagaaacttggtatagatgacttggttcactttgattttatggacccaccagctcca
gaaaccttaatgagagccctagagcttttgaattacctggctgctttgaatgatgatgga
gacttgactgaactgggatccatgatggcagaattccccctcgatccacagctggctaaa
atggttattgcaagttgcgactacagctgttctaatgagattctatctattactgccatg
ttgtcagtcccacagtgttttgttcgccccacggaagccaagaaagcggcagatgaggcc
aagatgaggttcgcccacatagatggagatcatttgaccttgctgaacgtctaccacgct
ttcaaacagaatcatgaatcggttcagtggtgttatgacaacttcattaactaccagtcc
ctgatgtctgcagacaacatacgccagcagctgtcacgaatcatggacagatttaatttg
ccacgtcgaagcacagacgtcacaagcagagactattacatcaatataaggaaagcattg
gttactggttactttatgcaggtggcacatttggaacggacaggacactatctaacagtg
aaagacaaccaggttgtgcagttgcatccttccacagttctcgatcacaaacctgaatgg
gtgctttacaatgaattcgttcttaccacaaagaactacatacgcacttgtacagacatc
aaaccagaatggttggtgaaaattgcccctcaatattatgacatgagcaatttcccacag
tgtgaagcaaagagacagttggaccgcatcattgccaaacttcagtccaaggaatacaca
cagtactga
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integrated database retrieval system
