Gekko japonicus (Schlegel's Japanese gecko): 107115159
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Entry
107115159 CDS
T04299
Symbol
GRIN1
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04020
Calcium signaling pathway
gja04080
Neuroactive ligand-receptor interaction
gja04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107115159 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107115159 (GRIN1)
04082 Neuroactive ligand signaling
107115159 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gja04040
]
107115159 (GRIN1)
Ion channels [BR:
gja04040
]
Ligand-gated channels
Glutamate (ionotropic)
107115159 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
107115159
NCBI-ProteinID:
XP_015272270
LinkDB
All DBs
Position
Un
AA seq
941 aa
AA seq
DB search
MSAMRLLLLAVLVSFSFARAGCEPKIVNIGAVLSTKKHEQVFREAINQANKRHGTWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSNVWFEMMRYYKWNHIILIVSDDHEGRAAQKKL
ETLLEEKESKSKKRNYENLEQLSFDNKRGPKAEKVLQFEPGTKNVTSLLLEAKELEARVI
ILSASEDDATTVYTSAAKENMTGPGYVWLVGEREISGNALRHAPEGLIGLQLMNGKNESA
HIRDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMQTKYAEGVTGRVE
FNEDGDRKYANYSVMNLQNNKLVQVGVYNGSHFLPNDRKIIWPGGETETPQGYEMSTKLK
IVTIHQEPFVYVKPTMSDGKCKPLLNSTGGLVQQVLCTGPNETMPGRPSVMLCCYGFCID
LLIKLAKTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILNLHENGFMEELDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFR
SFTSTLASSFKRRRSSKDTQYHPTDITGQLNLSDPSVSTVV
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgatgcgcctcttgcttctcgctgtgctcgtctccttctcgttcgcccgcgcc
ggctgcgagcctaaaatcgtcaatatcggcgcggtgctgagcaccaagaaacatgagcag
gtcttccgcgaggccatcaaccaggccaacaagcgccatggcacctggaagatccagctc
aacgccacctcggtcacgcacaagcccaatgccatccagatggccctgtccgtctgcgag
gatcttatctccagccaggtctatgccatcttggtgagccacccaccagctccaaatgac
cacctaacaccaacgcctgtgtcatacacagccggcttctataggatccctgtcattggt
ctgacaacacgcatgtctatatattcagataagagtatccacttatctttcctgcgtact
gtccccccctattcccaccagtccaatgtctggtttgaaatgatgcgctattataagtgg
aaccacatcattctaattgtcagcgatgatcatgaggggcgggctgcgcaaaagaaacta
gaaaccctcttggaagaaaaagaatccaagagtaaaaaaaggaactatgaaaacctcgaa
caactatcctttgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgaacct
ggaacaaaaaatgtgacttcactgctactggaagctaaagaactggaggcccgggttatt
atcctctctgcaagtgaggatgatgctacaactgtgtacacatcggcagccaaagaaaac
atgactggtccaggctatgtgtggctggtaggggaaagggagatctcaggcaatgcccta
cgccatgcaccagaaggactcattggtttgcagctcatgaatgggaagaatgagtctgct
cacatcagagatgcagtggctgtggtggcccaggctgtccatgacttgtttgagaaagag
aacatcacagatccaccaaggggctgcgtgggaaacaccaacatctggaagacggggcct
ctgttcaagagagtgctgatgcagaccaaatatgcagaaggtgtgactggacgggtggag
ttcaacgaagatggagaccggaaatatgccaattacagtgtcatgaatctacagaacaat
aaactggtgcaagttggagtttacaatggtagccacttcctgcccaatgaccggaaaatc
atctggcctggaggagaaacagagacaccacagggctatgaaatgtctacaaaattaaag
attgtgacaatccaccaagagccctttgtctatgtgaaaccaaccatgtcagatggaaag
tgcaaaccactgctcaacagtactggggggctggtgcagcaggtcctttgtactgggcct
aatgagactatgccaggacgccccagtgtgatgctgtgttgctatggcttctgtattgac
ttactgatcaagcttgctaagacgatgaattttacctatgaagttcaccttgtagctgat
ggtaaatttgggacccaagagcgggtgaacaacagcaacaagaaagagtggaacgggatg
atgggggagctgctgagtggccaggctgacatgattgtggctccactgactatcaacaac
gagcgagcgcaatacattgaattctccaagcctttcaaataccagggactcaccatctta
gtcaaaaaggaaattccccgcagcacactggattcattcatgcaaccattccagagcact
ttgtggcttttggtggggctctcggttcatgtagtggctgtgatgttatatctcctcgac
cggttcagcccgtttggacggtttaaagtgaatagtgaggaagaagaagaggatgccctg
acactctcttctgctatgtggttctcctggggagtccttctgaactctggcattggagaa
ggtgctccccggagtttctccgctcgaatccttggaatggtgtgggctggatttgctatg
attattgtggcctcgtatactgccaacctggctgccttcctggtgttggacagacctgag
gaacgaatcacgggcattaatgatcccaggttgcgaaacccctcggataagttcatatat
gctacggtgaagcaaagttcggtggacatttacttccgccgtcaggtggagctaagcacc
atgtaccgccacatggagaaacacaactatgagagtgctgcagaagccatccaggccgtc
agggataacaagctccatgcattcatctgggattcagctgtgctagaatttgaagcatca
cagaagtgtgacctggtgacaacaggggagttattcttccgctctggcttcggcatcggg
atgcgcaaggacagcccttggaagcagaacgtctccttggccatcctcaacctccatgag
aacggcttcatggaagagcttgacaagacttgggtgaggtatcaggagtgtgattcccga
agtaatgctccagcaactctcacctttgagaacatggcaggtgtattcatgctggtggct
ggaggtattgtggccgggatatttttaatattcatagaaatagcttacaaaaggcataaa
gacgcacggaggaagcagatgcaactggcgtttgcagccgttaatgtgtggcggaaaaac
ctgcaggatagaaaaagtggtagagcagaaccagaccctaaaaagaaagccacttttagg
tccttcacctctaccctggcctccagcttcaagagacgtaggtcctccaaagacacgcag
tatcatcccactgacatcactgggcagctcaacctctccgacccctcggtcagcaccgtg
gtgtga
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