Gekko japonicus (Schlegel's Japanese gecko): 107115206
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Entry
107115206 CDS
T04299
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03008
Ribosome biogenesis in eukaryotes
gja03013
Nucleocytoplasmic transport
gja03015
mRNA surveillance pathway
gja05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107115206 (NXF1)
03015 mRNA surveillance pathway
107115206 (NXF1)
03008 Ribosome biogenesis in eukaryotes
107115206 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107115206 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107115206 (NXF1)
03009 Ribosome biogenesis [BR:
gja03009
]
107115206 (NXF1)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107115206 (NXF1)
mRNA cycle factors
Stress granule specific factors
107115206 (NXF1)
Ribosome biogenesis [BR:
gja03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
107115206 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
UBA_8
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
107115206
NCBI-ProteinID:
XP_015272332
UniProt:
A0ABM1KF45
LinkDB
All DBs
Position
Un
AA seq
629 aa
AA seq
DB search
MAEGGKGGYSEHDDRVGGGGSSNRGFPGRRRKGRGPFRGKMYSEMNHHQKNWSNPGSGPR
SRVEEEDEDVTMSDPHDALRSRYTPYGQRPNRPDRERGGLSNLNLTVRKNLGAPERNFAI
SNATKKNWFKVTVPYGRKYEKSWLLNAIQNQCTVPFIPLEVHFANNRVVFYVEDAAAANA
LKHLSRKIVDPDGYKVVIMINAWSAPPTVQRELKPEEIEQLKLCMSRRYDGSQQALDLKS
LRTDPDLVAQNMDVVLHRRNCMQTMLHIIEENIPELLSLNLSDNKLYRLDDMAEIAEKAP
NLKILNLSCNQLKTDRDLDKLKTLKLEELWLDNNPLCDNFRDQSTYISAVRERFPKLLRL
DGHELPPPIAFDVEAPTTLPDCKGSYFPSDDLKVLILRFLQQYYAIYDSGDRQGLLDAYH
DGACCSLSIPVSIQNNPGRSPLGEYFKNSRNVKRLKDPAMRFRLLKHTRLNVVAFLNELP
KTQHDINSFVVDVCVQTSTLLCFTLSGVFKEVDGKNRESMRAFTRVFIAVPASNNGLCIV
NDQLFIRKATNEEIRKAFVMPAPTPSSSPVPTLSAEQQEMLQNFSLQSGMNLEWSQKCLS
DNDWDYAHAARVFTQLKAEGKIPEVAFLN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggagggaagggcggatacagcgaacatgatgatcgtgtgggtggaggaggc
agcagcaacaggggcttccctgggcggcggaggaaaggccggggccccttccgagggaag
atgtacagtgagatgaatcaccatcagaaaaactggagcaatccaggctctggtcctcgt
agccgtgtagaggaagaggatgaagatgttaccatgagtgaccctcacgatgcactacga
tctcgctacactccttatgggcagcggccaaacagaccagaccgggagcggggcggcctg
agcaatttaaacctcacagtgcgaaagaatctgggagctccagagcgaaattttgccatc
agcaatgccaccaagaagaactggttcaaagtcacagttccctatgggaggaaatatgaa
aagtcatggcttcttaatgccattcagaatcaatgcactgttcccttcattcctttggag
gttcactttgccaacaatcgagttgtgttttacgttgaggacgctgctgctgccaatgcc
ctcaagcacttgtcccgaaaaattgttgacccagatggctacaaggtggtcataatgata
aacgcatggagtgcaccaccaactgtccagcgtgaactgaagccagaagagattgagcag
ttgaagctttgtatgagtaggaggtacgatggttcgcaacaggccctggacctgaagagc
cttcggacagatccagatctggtggctcaaaacatggatgtggtgttgcatcgccgaaac
tgtatgcaaactatgctgcacatcattgaggagaacatccctgagcttctctctctcaac
ctgagcgacaacaagctctaccggctggatgatatggccgaaattgccgagaaggctccc
aatctgaaaatcctcaatttgtcctgcaaccagttgaagacggaccgtgatctggacaag
ttgaaaacgttaaagcttgaggaactgtggctggacaacaatccgctgtgtgataacttc
cgggaccagtccacctatatcagcgctgtccgggaacggtttccgaagctgctgaggctg
gatggtcacgaactgccccctcccattgcctttgatgtagaagcacctactacgctgccc
gactgcaagggcagctattttccttcggacgacctgaaggtgctgattctccgatttctg
cagcaatactacgctatctatgactctggggaccggcaagggttattggatgcctaccat
gatggggcctgctgctccctgagcattcccgtttcgatacagaataatccaggaaggagc
cctttgggtgaatacttcaagaacagtaggaacgtgaaaagacttaaagatcccgccatg
cgtttcaggcttctgaagcacacgcggctgaatgttgtggccttcctcaacgagctgccc
aagactcaacatgacatcaactccttcgtggtggacgtctgtgtgcaaacgagcacacta
ctgtgtttcacgctcagcggggtctttaaggaagtggatggcaagaatcgggagtcgatg
cgggcattcacacgcgtgttcattgctgtgcctgccagcaacaacgggctgtgcattgtt
aatgaccagctgtttatccgcaaggccaccaatgaggaaatccgcaaggctttcgtcatg
ccagcacccaccccctcttctagtcccgtgcccacactctccgcagagcagcaggaaatg
ttgcagaatttctcgctgcagtctggcatgaacctggagtggtctcagaagtgcctctca
gacaatgattgggactatgctcatgccgcccgcgtgttcacccagctcaaggctgagggg
aagatcccagaagtggctttcctcaactga
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integrated database retrieval system
