Gekko japonicus (Schlegel's Japanese gecko): 107115449
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Entry
107115449 CDS
T04299
Symbol
PCDH20
Name
(RefSeq) protocadherin 20
KO
K16498
protocadherin delta 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107115449 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gja01009
]
107115449 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gja04515
]
107115449 (PCDH20)
Protein phosphatases and associated proteins [BR:
gja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107115449 (PCDH20)
Cell adhesion molecules [BR:
gja04515
]
Cadherins
Protocadherins
107115449 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
107115449
NCBI-ProteinID:
XP_015272650
LinkDB
All DBs
Position
Un
AA seq
907 aa
AA seq
DB search
NLFLFLLFLGPFNCFASYSRATELFYSINEGLPAGVLIGNVARDLQIQGAVEEEVGSEGK
QQLPQQWGETPLSFCLASQGLGSSYVNLDNRTGELHTSAREIDREALCTEDNIGSSVVAS
SSSSPLLSSESCLLLLDVLVLPQEYFRLIKVKVAIHDVNDNAPCFPTPQIHLFVPENSPI
NTRLAIEHPAVDPDMGTNGVQTYHLQDDYGVFTLDVEENENGERTPYLIVMGTLDREARD
EYVTLISAEDGGVPPLVGSATLTIGISDINDNCPQFNETQLNVTVFGNSSLGLRIASVHA
TDVDQGINAEITYSYSQKVPPSSRSLFHLDESTGTVKLAKRISGDTPRLHRLSILANGPG
CIPAVITVVVSIVKVMLRPPEIIPRFIANEAEGVVYLRELEPVNTPIAFFTIKDPDEKYK
VDCYLEGDGPFRLSPYKPYHNEYLLETTKPLDFETQRDYEISVVAWNSDGFHVNKIIKVN
ILDDNDNSPVFSQLLIELSIEENNSPNAFLTKLHATDADSGERGQVSYFLGPEAPSYFSL
DKVTGVLTVSTQLDREEREKYRYTVKAVDCGMPPRESIATVTISVLDKNDNSPRFINKDF
SFFVPENFPGFGEIGVISVTDADIGQNGWVALSVVNSSDIFVIDTGKGVLRAKVSLDREQ
QSSYTLWVEAVDGGDPPLSSTAKITVLLLDINDNPPMVLFPQSNMSYLLVLPSTLPGSPI
TEVYAIDNDTGMNAVIAYSIIGRRGPRPDSFKIDAKTGNITLEESLMRNDYGLYRLLVKV
SDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPDINIEEKEPQISIEPTHTKVELA
SCMPTLVALSIISLGSITLVTGMGIYICLRKGRKYHHGDENLEVQIPLNGGLSLHMLEKK
PVEISNI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
aatttattccttttcctgcttttcctgggacctttcaactgcttcgcgagctacagccgt
gccactgaactcttctacagcatcaatgaagggctacctgccggagtcctcattgggaat
gtggcccgggatttacagattcagggggcagtagaggaagaggtggggtcggaagggaag
cagcagctcccccagcagtggggggaaacccctctctccttctgcctggcctcccagggg
ttgggcagttcgtatgtcaacctggacaatcggacgggtgagctgcacacctctgcgcgg
gagattgaccgggaagcgctttgtacggaggataacattgggtcttctgtggttgcctct
tcctcctcttccccgctactgtcttctgagtcatgcttgctgctgctagatgtgttggtg
ttgccgcaggagtacttccgcctcatcaaggtgaaggtcgctatccatgatgtcaacgac
aacgcgccgtgcttccccaccccgcagatacacctctttgtgcctgagaattcacccatc
aacacccgcttagccatagagcatccggctgtggacccggacatggggactaatggggtc
cagacctaccacctgcaagatgactatggcgtttttacgttggacgtagaggagaatgaa
aatggggaaaggacaccatacctgattgtcatgggcactttggacagagaggccagggat
gagtatgttaccctcataagtgcagaggatggaggagtcccgccactggtgggcagtgcc
accctcactattggtatcagcgacatcaacgacaattgtccccagttcaacgagacgcag
ctgaacgtcactgtgtttgggaactctagccttggtttgcgcatcgcctctgtccatgct
acagatgtggatcagggaatcaatgcagagattacctattcctacagccaaaaggtacca
ccatcgtcccgcagtttgtttcaccttgatgaaagcacgggcaccgtcaagctcgccaag
aggatcagtggggacacgcctcgtcttcacaggttgagcatactggccaacggtcccgga
tgtatcccagctgtgatcactgtggtcgtatccatagtaaaagttatgctgagaccacca
gaaataatccctcgtttcatagcgaatgaagccgagggggtggtttacctgagggagctg
gaacctgtcaacacaccgatagcgttttttaccataaaggacccagatgagaaatacaaa
gtggattgctacttggaaggggacggcccgttcagattgtcaccatacaaaccgtaccac
aatgagtatttactggaaactacgaagcctttggattttgaaactcagagggactatgaa
atatcagtggttgcgtggaattcggatggattccacgtcaataaaataattaaagtgaac
attctggatgataatgacaactcacctgtgttctcccagctccttatagaactatctatt
gaggaaaataattcccccaatgcttttttgaccaagctgcacgcaacagatgctgacagt
ggagaaagaggacaagtatcttatttcctagggcctgaagccccatcgtatttctcttta
gataaagtcacaggagtccttacagtttccacccaactggatagagaagaaagagaaaaa
taccgctatactgtcaaagcagtagattgtggaatgcctccccgagaatcaatagccact
gtgaccatctcagtattggataaaaatgataacagtccgagatttattaacaaggatttc
agtttttttgtaccagagaacttcccgggctttggcgaaattggagttataagtgtcacg
gatgcagatatcggtcaaaatggatgggttgcactttccgttgtaaatagcagtgacatc
tttgttattgacacgggcaaaggggtgttgagggcaaaggtctccttggacagggaacag
cagagttcctataccttgtgggttgaagcagttgacggaggtgaccctcctttgtcctct
accgcaaaaataaccgtccttttgctcgatataaatgacaacccaccaatggtcttgttc
cctcagtcaaatatgtcttacctcctagtgctcccctcgacgctgcccggatctccaatc
acagaagtctatgccatagataacgacaccggtatgaatgcagttatagcatacagcatc
attgggagaagaggtccccgtccagactcctttaaaattgatgccaagacaggcaatatc
actctggaagagtcactcatgcgaaatgattatggcctctaccggcttctcgttaaagtt
agcgatcacggctatccagaaccgctccattctacagtcatggtgaacctctttgtcaac
gacactgtgagcaacgagagctacattgaaagtctgttaagaaaggaaccggacataaat
atcgaggaaaaggagccacagatttcaatagaacccacacacacaaaagtagagttggca
tcctgcatgccaaccttagtggccctatcaataataagcttgggttcaataactctggtg
actgggatgggcatctacatctgcctaaggaaaggaaggaagtatcaccacggagatgaa
aacttggaagtacaaatcccattaaatggaggactcagtctgcatatgcttgagaagaaa
ccagtggagatttctaacatctga
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integrated database retrieval system
