Gekko japonicus (Schlegel's Japanese gecko): 107115556
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Entry
107115556 CDS
T04299
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03022
Basal transcription factors
gja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107115556 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
107115556 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gja03021
]
107115556 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
gja03400
]
107115556 (GTF2H1)
Transcription machinery [BR:
gja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107115556 (GTF2H1)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107115556 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DpaA_N
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
107115556
NCBI-ProteinID:
XP_015272780
LinkDB
All DBs
Position
Un
AA seq
549 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSMNAVDNSTAPTKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKLKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNAGSKD
LFAECAKMDEKGLKTMVSQGVKNPLLDLTSLEDKSLDEGYGVSLGPSTSNSVNKSIRESS
NAAIIKRFNHHSAMVLAAGLRKQEAQNDHCSETSSMDGNSRDSDVFQPPIKKVKLQESIE
YEDLENNNSIKTIALNLKKSERYYHGPTPIQSQQYATSQDIINSLHSIRQEMEIYVPNLT
QVLSSGAASSTISALSPGGALMQGGTQQAINQMVPNDVQCELKHLYVAVGELLRHFWSCF
PVNTPFLEEKVLKMRSNLERFQITKLCPFQEKIRRQYLSTNLINHIEEMLQTAYNKFHTW
QSRRMLKKT
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcatcggaagaagtcttattaatagtaaagaaggtgcgtcaaaagaaacag
gatggggctctttacctcatggctgaaagaatagcctgggcacctgagggcaaagaccgc
ttcacaatcagccatatgtatgcagacataaaatgtcagaaaatcagccccgaaggaaaa
gccaagattcagcttcagctggtattgcatgcaggggacacgaccaacttccatttctct
aatgaaagtacagcagtgaaagagcgagatgcagtaaaggatctccttcagcagttgctt
cccaaatttaagaggaaagcgaataaagaacttgaagaaaagaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagtcaggtgatcagtgctgaa
gaattctgggccaaccgtttaagcatgaatgctgtagataattctactgcacctactaag
caggatgtgggcatttctgcagctttcctggctgatgttcgacctcaaacagatggatgc
aatggcctgagatataatttaacttcagatatcattgagtctatatttcggacttatcct
gcagtaaaattgaaatatgcagaaaatgttcctcataatatgacagagaaagaattctgg
acgcgattcttccagtctcactattttcatagagacaggttgaatgcaggatcaaaagac
ctttttgcagaatgtgccaaaatggatgaaaaggggttaaagacaatggtatctcaaggg
gtgaaaaatcctttattagatttaacatccttagaagacaagtcattggatgaaggttat
ggcgtttccttaggaccctccacatccaactccgtcaataaatcaataagggagagtagc
aacgctgccattataaaacggtttaaccatcacagtgccatggtcctcgcagctggactc
cggaaacaagaagcacaaaatgatcactgtagcgagaccagtagcatggatggaaactcc
agggattcagatgtctttcagccaccaataaaaaaggtaaagctgcaagagtccattgaa
tatgaggatttagaaaataacaacagcattaaaactattgcactgaacctaaagaaatca
gaaaggtattatcatggtccaacaccaattcaatcacagcaatatgcaactagtcaggat
attattaattctttgcatagtattagacaagaaatggaaatctatgtccccaatctaact
caggttctctcaagtggtgctgctagtagtactatatcagctctgtcacccggaggagca
cttatgcagggtggaacacagcaagccataaaccagatggtgccaaatgatgttcagtgt
gaactaaaacacttgtacgtggcagtaggggaactgctgagacacttctggtcctgcttt
cctgtcaacacgccattcctagaagagaaggttctgaaaatgaggagtaatttggaaaga
tttcaaattacaaaactctgcccattccaagaaaaaatccggagacagtatttaagcaca
aatctgataaatcacatagaagagatgctgcagacagcctacaataaattccacacctgg
cagtcccggcgtatgctaaagaagacgtga
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