Gekko japonicus (Schlegel's Japanese gecko): 107115996
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Entry
107115996 CDS
T04299
Symbol
COL4A4
Name
(RefSeq) collagen type IV alpha 4 chain
KO
K06237
collagen type IV alpha
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04382
Cornified envelope formation
gja04510
Focal adhesion
gja04512
ECM-receptor interaction
gja04518
Integrin signaling
gja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107115996 (COL4A4)
04518 Integrin signaling
107115996 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107115996 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107115996 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107115996 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gja04147
]
107115996 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
gja00536
]
107115996 (COL4A4)
Exosome [BR:
gja04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107115996 (COL4A4)
Glycosaminoglycan binding proteins [BR:
gja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107115996 (COL4A4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
gag-asp_proteas
Motif
Other DBs
NCBI-GeneID:
107115996
NCBI-ProteinID:
XP_015273311
UniProt:
A0ABM1KHX4
LinkDB
All DBs
Position
Un
AA seq
1999 aa
AA seq
DB search
MELRHLATDCNFGAHLDDALRDHFVVGLCKEKLRQRIMEKEKVNLKEALATAIAWERSHA
APAAALQVELEGSEEQDVHRAYGGARERTQAPHRTPASNASTGCQHPSAPTCTSCRDQHE
RKTCWFRSWSWGSKDHIAKVCRAKPTGRPQPARQRAEAHFKEDAGTEDFYLLTHTAEKVL
RLPGKSPTPKFMATVKIEGSTCEMEVDSGSAASIISAAMLKCLCSKGGPRLRPAQVTFMD
FQWNQVLVKGVGTFRVQFKNFKRNLDLVVVEGDLVSLLGRAWFEPLGITVEGVQACTTQD
FKGICQEFPAVFDDSLGRYTGPPVSLRLEPSVAPIRMRARTVPLTVKPKIDAELDCLVAQ
GILEPISHAAWETPIVVGQPGQLGDQGPIGALGSVGPIGLPGEKGQRGEMGLPGPAGERG
DKGPTGVPGFAGLDGMPGLPGPEGPRGKLGFDGCNGSKGEPGFPGEAGRVGPIGSFGIPG
QKGEKGYPISVSKFIKGASGERGDPGPHGIPGPRGERGPRGSPGYPGQSGSQGAPGQPGL
PGKQGNPGVGVEGQKGEPGDVGPPGSPGQPLLVGPPSSHLLKGEKGIKGMPGLIGSKGLP
GPQGELGNGKKGEKGTIGFPGIQGTPGSYGSPGFPGNKGELGISGFPGQPGFPGTKGEPG
KRGQPGPPGAQTTAGVGIKGIQGDPGDPGPSGDVGATGLPGPSGMDGRPGEPGASVPGSK
GSLGIQGPQGARGEPGLPAISETAPGRPGSPGLPGLPGRLGSQGLPGPPGVACSGMGSPG
QPGAKGQRGPSGERGEKGGKGNPGNCSCGTGPCGPPGKPGLPGNPGRKGETGLPGKYGKK
GDQGLPGRIGQQGSIGMPGSSGFTGEKGDKGESVKITMKGIKGQRGSQGDPGLPGQHGVP
GKDGDPGVSGEKGPQGDDGIAVSGDKGFPGPLGLPGPRGPTGPSGLGISGPHGIRGLPGD
PGSPGIRGLPGLKGQKGSTLQHATGYPGNPGPSGSPGKPGPKGSRGPPGRPGPNGFDGPK
GQQGKPGTLGIPGPEGVRGETGDPGEEGKSGSKVDGAPGLPGPPGPQGQKGVPGDINYGP
PGIPGNRGLPGVPGLSGIRGDTGLPGLQGQPGTPGSLGAKGLSGRKGSTGALGYPGSPGL
TCDKGLQGPPGPPGYVGPPGAPGFKGSKGLQGDTGPPGPAGMKGMPGVPGITGPPGLPGL
RGNIGLPGDNGLQGLPGQKGSKGSQGMQGFPGLPGNQGEKGVPGIKGEQGQTGQHGPPGE
CGSVGSKGERGLPGEDGCVILLVEKGQTGDPGLPGEVGLLGAQGDKGSPGFRGIPGLPGR
SGLVQKGEPGDTGQMGSQGLPGPPGIPGLRGIIGFQGQQGDQGAQGLPGILGKSGLDGAK
GAKGNRGDPAPHIGQPGKRGPPGNRGLPGLNGLPGVQGVPGVQGETGRPGSKGLPGYPGT
PGFPGAQGAAGLTGTPGDQGNPGLLGPPGFPGLPGPPGRKGPPGLPGIDGLNGLRGQKGL
PGPPGLSEMGPPGCTGEPGSKGSRGEPGLPGISLPGPPGDTGLLGPPGKSGAPGPSGPIG
QPCGDAPPGPPGDQGPAGLNGIRGLPGETGPRGKTIFVKGDPGDCGNPGLPGVPGIPGNP
GNKGVQGKQGSIGSKGPVGNPGPQGLPGAHGEPGDQGFQGSTGPLGPKGCRGDPGEPGKL
DYSSCPKTPGPPGVLGQRGSPGSIGIPGPPGFPGPQGRKGEEGLLGLQGESGFPGAPGSI
GDQGDKGEKGYPGLQGPPGQTGMPPGPETGAASGFLLVLHSQSDQEPLCPEGMARLWTGY
SLLYLEGQEKAHNQDLGLAGSCLPVFSTMPFAYCNINQVCYYASRNDKSYWLASAAPLPM
MPISDEEIRPYISRCAVCEAPAQAVAIHSQDQSIPPCPLNWRSLWIGYSFLMHTGSGDQG
GGQSLMSTGSCLEDFRSAPFIECQGQRGTCQFFANEYSFWLITVNPELQFASAPLSGTLK
NGQEQRRHISRCQVCMKHG
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgtcatctcgccaccgactgcaacttcggggcacatctggacgatgccctc
cgtgaccacttcgtcgtgggcttgtgcaaagagaaactcaggcagagaatcatggagaag
gagaaggtcaacctaaaagaggccctcgccaccgccatcgcatgggaaaggtcgcacgct
gctccggccgcggccctccaggttgagctagagggttccgaggagcaggacgttcaccgg
gcctacggaggggcccgggagcgcacccaagcaccgcaccgcaccccagcttcgaacgcg
agcaccggctgccagcatcccagcgcacccacgtgtaccagctgtagggaccagcacgaa
cggaagacctgctggtttcggagctggagttgggggtccaaggaccacatcgcaaaggtt
tgccgagccaagccaacgggacggccccagccagcacgccaaagagccgaggcccacttc
aaggaggacgccggcaccgaggacttctacctcctcacccacacagcggagaaggtactg
agactccccggcaaatcccccacccctaagttcatggccacagtaaagatagaggggtcc
acttgtgagatggaggtggattcgggttctgcagcttcaataatctccgcggcaatgctg
aagtgcctttgctctaaggggggaccccgattgcggccagcccaggtgacgttcatggac
ttccagtggaaccaggtgctggtcaagggagtcggaacattcagggttcagttcaagaat
tttaagaggaacctggacttagtagtggtcgaaggcgacctagtcagtttactggggcgg
gcctggttcgaacccctgggaatcactgtagagggagttcaagcgtgcacgacccaagac
ttcaagggaatttgccaagagtttcccgcagtgtttgacgactctctgggccggtatacg
ggccccccagtgtccttgcgcttagaaccctcggtggcccccattagaatgcgtgccagg
acggttccgttgacggtcaagccaaagatcgatgcggaactggactgcctagtagcacaa
ggcatcctggagcccatctcccacgcagcgtgggagacgcccatagtcgttggtcagcct
ggacagctgggggatcagggtccaattggtgctttgggttctgtaggacccattggcttg
ccaggagaaaaaggtcagagaggtgagatgggtcttcctgggccagctggagaaagagga
gataagggtcctaccggagttccaggatttgcaggtttagatggcatgcctggcttacca
ggacctgaaggacccaggggcaaacttggctttgatggatgtaatggttcaaagggggaa
ccaggatttcctggagaggctggtcgtgttggaccaataggctcatttggtattcctggg
caaaaaggagaaaaaggatatcccataagtgtttccaagttcattaaaggtgcttctgga
gaaagaggggatccaggaccacatggaatacctggtcctagaggagaaaggggaccaaga
ggctcacctggatatccaggccaatcaggatcacagggggctcctggtcaacctggctta
ccaggcaaacagggaaatccaggtgtcggagtggaaggtcagaaaggagagccaggcgat
gtggggcctcctggctctcccggacagccattattggttggacctccaagttctcatctg
ctaaagggagaaaagggtataaaaggaatgcctggattgattggctccaaaggattgcct
ggcccccaaggtgaacttggaaatggaaagaagggggaaaaggggactattggctttcct
ggaatacaggggactcctggttcttatggatctccaggttttccaggaaacaagggtgaa
ttgggaatttctgggtttcctgggcaacctggctttccaggcaccaagggggaacctgga
aagagggggcagccaggtccaccaggcgctcaaacaacagcaggtgttggaataaaaggt
attcaaggagatcctggagatcctgggccctctggagatgttggtgccactggattgcct
ggtccttcaggcatggatggaaggccaggagaacctggagctagtgtcccaggttccaaa
ggtagtttgggaatacaaggtcctcaaggtgctcgaggagagcctggcctccctgctata
tctgaaactgctccaggaagaccaggatcgccgggattaccaggtttacccggaagacta
ggaagccagggcttgcctgggccaccaggtgttgcttgcagtgggatggggtcccctgga
caaccaggagctaaaggccagagaggtccatcaggggaaagaggtgaaaaaggaggaaaa
ggcaatccaggcaactgttcatgtggaactggtccctgtggcccaccaggaaaaccaggt
ctaccaggtaatcccggaagaaaaggagaaactgggttacctggaaaatatgggaagaaa
ggtgaccaaggtttacctggcagaattggacaacaaggttccatcggaatgccaggttcc
tctggattcactggagaaaaaggagataaaggtgaatcggttaaaataacaatgaaaggg
ataaaaggacaaagaggctcccagggggaccctgggcttccaggacagcatggtgttcct
ggtaaggatggggatccaggagtttctggtgaaaaaggacctcagggtgatgatgggatt
gctgtgtcaggtgataagggatttcctggccctctaggacttcctggccctagagggccc
acaggaccatcaggacttggtatctcaggtccacatggtatccgtggtctaccgggagat
ccaggaagccctggtataagaggattgcctggcctcaaggggcagaaagggagtactctt
caacatgcaactggatatcctgggaatccaggcccatctggttctccaggaaaaccaggc
ccaaaaggatcaagaggaccccctggtcgacctggccccaatggttttgatggcccaaaa
ggccagcagggcaaaccaggaacattaggtattcctggtccagagggtgtcagaggtgag
actggtgatccaggtgaagaaggtaaaagtggttccaaggtggatggtgctccaggattg
ccaggtcctcctgggcctcagggccagaagggcgttccaggtgacatcaattatgggcct
ccaggaattccaggcaacaggggccttccaggagtaccaggtttgtctggcatcagagga
gacacaggccttcctgggcttcaaggacagcctggcacaccaggatccctaggagctaaa
ggtcttagcggaagaaaaggttctactggagccctaggctatcctggctcacctggcctc
acctgtgacaaaggcttgcaggggccaccaggacctccaggctatgttgggccaccaggc
gctccaggtttcaagggctccaaaggcctacaaggagatacgggaccaccaggcccagct
ggaatgaaaggcatgccaggagttcctggaataacagggccacctggacttcctggttta
agaggaaatataggccttccaggagataatggattgcagggcctcccaggacaaaaagga
agcaaaggatcccaagggatgcaaggtttcccagggctaccaggaaatcaaggagagaag
ggtgttcctggtataaaaggtgaacaaggacaaacaggtcagcatggccctcctggagaa
tgtggatctgtgggctccaaaggtgaaagaggacttccaggtgaagatggctgtgttatt
ctattggttgaaaaaggacaaactggggatccaggccttcctggtgaagtaggtttacta
ggagcacagggtgacaaaggcagccctgggttcagaggaatcccaggactgccaggcaga
agtggacttgtgcaaaagggtgaacccggtgataccgggcagatgggttcccaagggctg
ccaggcccacctggaattccaggactgagaggaatcattggttttcaaggacagcagggt
gaccagggtgcacagggactaccaggtattctgggaaaatcaggacttgatggtgcaaaa
ggagctaaaggtaacagaggagatccagctcctcacattggccagcctggtaagagaggc
cctccaggaaatcgaggattgccaggactcaatggactaccaggtgttcaaggagtacca
ggtgttcaaggggaaacaggaagaccaggatccaaagggttacctggatacccaggaact
cctggcttcccaggagctcagggagctgcaggattgacaggaactccaggtgaccaaggt
aatcctggccttttgggacctccaggttttccaggattacctggacccccaggtcgaaaa
ggccctccgggattgcctggaatagatggcttgaatggactacggggtcaaaaaggttta
ccaggacctccaggtttaagtgaaatggggcctccaggatgcactggagaacctggatca
aaaggcagtagaggagaacctggactaccaggaatttccctcccaggacccccaggagac
acaggcttgttagggccgcctggcaagtcgggggctcctgggccttcaggacctattgga
cagccatgtggagacgcaccacctgggcctccgggtgatcaaggccctgctggtttgaat
ggcatcagaggtcttcctggagaaactggaccgcgaggaaagactatttttgttaaagga
gatccaggtgactgtggaaaccctggcctacctggggttcctggtatacctggaaatcca
ggaaataaaggagttcaaggaaagcaaggaagtattggttcaaaaggtccagtggggaac
ccaggaccgcaggggcttcctggtgcccatggagagcctggtgatcaaggatttcaagga
tcaactggacctttgggtcccaaaggttgcagaggtgacccaggcgaacctggaaaactt
gattactcctcatgtcccaagactccagggcctcccggagtattaggccaaagagggtca
ccgggttccataggaattccagggccaccaggtttccctggtccccaaggcagaaaagga
gaggaagggctgttaggtctgcaaggtgagagtggctttcctggggcacctggatccatt
ggtgatcaaggtgacaagggagaaaaaggatacccagggctgcaaggccctccaggccag
actgggatgccgccagggcctgaaacaggagctgctagtggattcttgcttgttctgcac
agtcaatcagaccaagaaccgctgtgtccagagggaatggcaagactgtggactggatac
agtctgctatatcttgaaggacaggaaaaggcccataatcaagacctcggtttggctgga
tcttgtcttcctgtattcagcaccatgccttttgcttattgcaatatcaatcaggtctgc
tactatgcaagcagaaatgataaatcttactggttggcaagtgctgctcctttacccatg
atgccaatttctgatgaagaaatacggccctacattagcagatgtgctgtatgtgaagct
cctgcccaagctgttgccattcatagtcaagatcaatccattcctccatgtccactgaac
tggagaagtctttggataggatactcatttttgatgcatactggatctggtgaccaggga
ggtggacaatctctcatgtcaacgggaagctgccttgaagatttcagatcagcacccttt
attgagtgccagggtcagcgaggaacatgtcaattttttgcaaacgaatacagcttctgg
ttaattactgtaaatccagagttgcaatttgcatcagctcccctctcagggacgcttaaa
aatggtcaagaacaacgcagacatataagcagatgccaggtctgcatgaaacatggataa
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integrated database retrieval system
