Gekko japonicus (Schlegel's Japanese gecko): 107116172
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Entry
107116172 CDS
T04299
Symbol
APEX1
Name
(RefSeq) apurinic/apyrimidinic endodeoxyribonuclease 1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107116172 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gja03400
]
107116172 (APEX1)
Enzymes [BR:
gja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
107116172 (APEX1)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
107116172 (APEX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
107116172
NCBI-ProteinID:
XP_015273532
UniProt:
A0ABM1KIJ5
LinkDB
All DBs
Position
Un
AA seq
317 aa
AA seq
DB search
MPKRGKKKEDGVIPEEKEEVAEPEPKKGKKGGAKAEKEADGPIMYQDPPEKLSSPSGKKY
TLKITSWNVDGIRAWFKKKGLEWVREEDPDVLCLQETKCAEKQLPADIREMAEYPHKYWA
CSDDKEGYSGVALLSKVKPIDVTYGIGEEEHDKEGRVISAEFPSHFLVTAYVPNSGRGLV
RLEYRQRWDKAFRAYLQGLGARKPLILCGDLNVAHQEIDLKNPKGNKKNAGFTPEERAGF
GQLLEAGFTDTFRHLYPDAPYAYTFWTYMMNARAKNVGWRLDYFLVSGGLLEGLCDSKIR
SKALGSDHCPITLYLAV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgagggaagaagaaggaagatggagtcattccggaagagaaggaggaggtg
gcagagccagagcctaagaagggtaagaaaggcggagcgaaggctgagaaggaggccgat
ggcccgatcatgtaccaggaccctccggaaaaactctcctctcctagcggcaagaagtac
acgttgaagatcacctcctggaatgttgatggcatccgtgcctggttcaagaagaagggc
ctggagtgggtgcgcgaggaagaccccgacgtgctctgcctgcaggaaacgaagtgtgcc
gagaaacagctgcccgcggacatccgggagatggcggaatatccccacaagtactgggcc
tgttcagatgacaaggaggggtacagcggagtggccctgctctccaaggtcaagcccatc
gacgtcacgtacgggatcggtgaggaggagcatgacaaggaaggccgcgtgatctcggcc
gagttcccctcccacttcctggtgaccgcctacgtgcccaactctggccgggggctggtg
cggctggagtaccgccagcgctgggacaaggccttccgggcttacctccaagggctgggc
gcccgcaagcccctgatcctgtgcggcgacctcaatgtggcgcaccaagagatcgacctc
aagaacccgaagggcaacaagaagaacgcgggcttcacaccggaagagcgggcgggcttc
ggccagctgctggaggccggcttcaccgacaccttccgccacctctaccccgatgctccc
tacgcctacaccttctggacctacatgatgaacgcccgggccaagaacgtcggctggcgg
ctcgactacttcctggtatccggcgggctgctggagggcctgtgcgacagcaagatccgc
tccaaggccctggggagtgaccactgccccatcaccttgtatctggctgtgtga
DBGET
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