Gekko japonicus (Schlegel's Japanese gecko): 107116386
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Entry
107116386 CDS
T04299
Symbol
VPS16
Name
(RefSeq) VPS16, CORVET/HOPS core subunit
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04140
Autophagy - animal
gja04148
Efferocytosis
gja05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107116386 (VPS16)
04148 Efferocytosis
107116386 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107116386 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gja04131
]
107116386 (VPS16)
Membrane trafficking [BR:
gja04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107116386 (VPS16)
Hops complex
107116386 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
107116386
NCBI-ProteinID:
XP_015273771
LinkDB
All DBs
Position
Un
AA seq
775 aa
AA seq
DB search
KLDLYSMVWDVREESLRECLVAAAPYGGPIALLKPKKDKSPGARPELHIYSASGVRLAST
LWKNCPAVHLGWTASEDLLCIQEDGSVLVYSIFCEFKRCFRMGNEVLQNHVVEAKVFHTE
YGTGVAILTGANRFILATNVDDLKLRRMPEVPGLQKPPSCWAVLCQDRVTILLLAIGQDL
LLLDNTTCSTVTLPGMNPLAGSYLRMAVSFNYRYLALFTDTGYVWMGMSHLKEKLYDFTC
NLRTPPKQMFWCTRPRSRQRAVALAWDRLLLVAGNAPKGIEYHLDEDSYLVPELDGVRIF
SSSTHEFLHEIPESTQEIFKIASMAPGALLLEAQKAYEKESQKADEYLREIREQDLLPEA
VRKCIEAASYEHDPETQKALLRAASFGKCFVDKFPPESFVESCRDLRVLSAIRDYQIGIP
LSYAQYKQLTIEVLLDRLVLRRLYPIAIKICEYLRLSEFQGISRILAHWACYKLLEYEPR
SGKQVPLLLKMTRSTLALSKAIESGDTDLVYTVVLHLKNVLNRGSFFMTLQNQPVALSLY
RQFCKHQELDTLKDLYNQDDDHQELGNFFVRSSYTNEQRIEGRVASLMNAVDEYYKAKNE
FAAKATEDQVKLLRFQHRMQKEEDRPYLDYSLHDTVYKLILDKNHKKAEQLYRDFKIPDK
RFWWLKVSALAEREDWDELEKFSKCKKSPIGYMPFVEICMKHHNRHEAKKYTLRVAPEQR
VKALILVGDLGQAADAAIEHKNENEMNLVLSKCTAITDSSVANKINCAKAQILKK
NT seq
2329 nt
NT seq
+upstream
nt +downstream
nt
gaaactggatctctactccatggtctgggatgtgagagaggaaagcctgcgggagtgttt
ggtagccgctgcaccttacgggggacccattgccctgctgaaacccaagaaagacaaatc
gcccggtgcccggccggagctgcacatctattctgcttcgggggtccgcttggccagcac
tctgtggaagaactgtccggcggtgcatctgggttggacggccagtgaagatctcctctg
tattcaggaagatggctcggttctcgtctacagtatcttctgcgagttcaagcgctgctt
ccgaatgggcaatgaggtgctgcagaaccacgtggtggaggccaaagtcttccacacaga
gtacgggaccggggtggccatcctcacgggggcaaacaggttcatcctggccaccaacgt
tgacgatttgaagctccggaggatgcctgaagtgcccggcctccagaagcccccctcctg
ctgggccgtcctgtgccaagacagagtgactatcctcctcctggcgattggccaagacct
gctcctgctggacaatacgacctgctccacggtgaccctcccggggatgaacccccttgc
gggctcctacctgcgcatggcagtctctttcaactaccgctacctggccctcttcaccga
caccggctacgtctggatgggaatgtcccacttaaaggaaaagctgtacgacttcacctg
caatctgcgaactccgccaaagcagatgttttggtgcacccggcctcgaagcaggcagcg
ggcggtggccttggcctgggatcggcttctcctggtggccgggaatgccccgaaggggat
cgaataccacctagacgaggattcgtacctggtgccggagctcgacggcgttcggatttt
ctcctcttccacccacgaattcctccacgagattccagaatccacccaggagatcttcaa
aatcgcatctatggccccaggagctttgctactggaagcccaaaaggcatatgagaaaga
gagccagaaggccgacgagtacctgcgggagatcagggagcaggatctgttgccggaggc
cgtcaggaaatgcatcgaagctgccagctatgaacacgacccggagacccaaaaagctct
ccttcgggcagcctcctttgggaaatgcttcgtcgacaagttcccgcccgagagctttgt
ggagtcgtgtcgggacctgcgggtgctcagcgccatccgggattaccagatcgggatccc
cctcagttacgctcagtacaaacagctcaccattgaagttttactggacaggttggttct
gcggagactttaccccatcgcgatcaagatctgcgagtacctgcgcctctcggagttcca
gggcatcagccggatcctggctcactgggcctgttacaagctgctggagtacgagccgcg
gtccgggaagcaggtcccgctgctgctgaagatgacgcggagcaccctggcgctgagcaa
agccatcgagagcggagacaccgacttggtttacaccgttgtgttgcatctgaagaacgt
actgaaccgcggctctttcttcatgaccctgcaaaaccagcctgtggcgctgagcctcta
tcgccagttctgcaaacaccaagagctggatacactcaaagacctctacaaccaagacga
cgatcatcaggaactcgggaacttctttgtccgctccagctacaccaatgagcagcggat
cgaggggcgtgtggcgagcctgatgaatgccgtggacgaatattacaaagccaagaatga
gtttgctgccaaggccaccgaagaccaggtcaagctgctgcggttccagcaccgcatgca
gaaggaggaggaccggccgtacctggactactccctccacgacaccgtctacaagctcat
cctggacaagaaccacaagaaggccgagcagctctaccgcgacttcaagatccccgacaa
acggttctggtggctgaaggtcagcgccttggctgagcgggaagactgggacgaactgga
aaagttctccaagtgtaagaagtcgcccatcggatatatgcccttcgttgagatctgcat
gaagcaccacaaccgccacgaggccaagaagtacaccctccgcgtcgccccagagcagag
ggtgaaagccttgatcttggtgggggatctgggccaggcggccgacgcagccatcgaaca
caagaacgagaacgagatgaacctcgtcctgtccaagtgcacggcgatcaccgactcctc
cgtcgccaacaagatcaactgcgccaaggctcagattctgaagaagtag
DBGET
integrated database retrieval system
