Gekko japonicus (Schlegel's Japanese gecko): 107116495
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Entry
107116495 CDS
T04299
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107116495 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107116495 (CNOT10)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107116495 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ARM_TT21_N
ARM_TT21
TPR_8
ANAPC3
TPR_7
TPR_17
ARM_TT21_2nd
DUF6058
TPR_MalT
DUF948
Motif
Other DBs
NCBI-GeneID:
107116495
NCBI-ProteinID:
XP_015273885
LinkDB
All DBs
Position
Un
AA seq
744 aa
AA seq
DB search
MAADKGGDQGAEKHEGTGSTSGITDQEKELSNSALQAFMAGNYETCLQHLSCLQEINKDD
YKIVLNMAVAEFCKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAIIVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTWQAEKALHLLAVLEKMIS
QGGNNKNGKNETGNNTGKEASNHKAESGTLTEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACMQLGTGGTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGSSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSVQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQESK
QENGSKVGNQLGGNNENNENSEACSSKSHEGDKFVPAPPSSPLRKQELENLRCSILACSA
YVALALGDNLMALNHAEKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYD
KARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKMLSEMRK
KPVFQPAHLVQPIQMPAFTAVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgacaaaggaggagatcagggagcagagaaacatgaaggtacaggttccact
tctgggatcactgaccaagaaaaggagctatcaaatagtgcactgcaagcttttatggct
ggaaattatgagacatgtctgcagcaccttagctgcctgcaagaaataaacaaagatgat
tacaaaatagttttaaacatggcagtagcagagttctgtaaaagcaatcagacaacaaca
gataacttgagacagacattaaaccagctgaaaaaccaggttcactcagctgttgaggaa
atggatggcttagatgatgttgaaaacagcatgctctactacaaccaggctgttattttg
tatcatcttcggcaatacactgaagccataattgttggagagaaactttaccagttcata
gagccttttgaagagaaatttgcccaggcagtgtgtttcctgcttgttgacttgtacctg
ctgacttggcaagctgagaaagccttgcatctgctggctgtgctagaaaaaatgatttca
caaggaggcaacaacaaaaatgggaaaaatgagacaggtaataacactggtaaagaagct
tccaatcacaaagctgaaagtggaactcttacagaggctgctaaatctaaaatacatcag
tacaaggtgcgagcctatattcagatgaaatctctgaaagcatgcaagagagagatcaag
tcagtcatgaatactgctggaaattctgctccttctctgtttctgaaaagcaactttgag
tatttaagagggaactatcggaaagcggtaaagctgttgaacagctcaaacattgctgag
catccaggatttatgaagacaggtgaatgcttacgatgcatgttctggaataatcttggg
tgcatccattttgccatggggaaacacaatttaggaattttctactttaaaaaggcctta
caggaaaacgataatgcctgtatgcagcttggaacaggaggcacagacccaggcaaaaaa
ttttctgggcggcccatgtgcaccttattgaccaacaaacgttacgagttgctgtataac
tgtggcattcagcttttacacattgggaggccactagctgcttttgaatgtctgatagaa
gccgtgcaagtttatcactcgaatccccgcctctggctgaggatagcagaatgctgcatt
gctgccaataaaggaagttcagaacaagagacaaaaggcctcccaagcaaaaagggcatt
gtacagtctattgtcggccaaggatatcatcgtaaaatagtcttagcatcccaatctgta
cagaacgttgtttataatgacggtcagtcttcagctatacctgtagccagcatggagttt
gcagcaatttgtctgagaaatgccttattgctgcttcctgaagatcagcaggaatcaaag
caggaaaatggatctaaagtcggtaaccagttgggaggaaataacgagaacaatgagaac
agtgaagcatgcagcagtaagagtcacgaaggagacaaatttgtccctgcgccaccatcc
tcgcctctcaggaaacaggaactggaaaatttaaggtgttctatacttgcttgcagtgct
tatgtggctctggcactgggagacaaccttatggccttgaatcatgcagagaaacttctt
cagcagccaaaactgtctgggtctcttaagttccttggccatttgtatgccgccgaggct
ctcatctctctagacagaatctctgatgctattactcacttgaacccggagaatgtcact
gatgtgtccctggggatctcttcaaacgagcaggatcaaggatctgacaaaggtgaaaat
gaagccatggaatcctctggcaagcagaccccccaatgttaccccagttcagtcacttct
gcacgtaccatgatgttgttcaaccttggaagtgcctactgcttgagaagcgagtatgac
aaagctcgcaagtgtctgcaccaggctgcctcgctgattcatcctaaggagataccacca
gaggctatcttattggctgtataccttgaacttcagaatggcaatactcagctggcacta
cagataatcaaacgaaaccagctgctcccttcagtgaaaatgctgtctgagatgcgaaag
aaacctgtattccagcctgcccacctggtccagcccattcaaatgccagcattcaccgct
gttcagaggaagtga
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