Gekko japonicus (Schlegel's Japanese gecko): 107117171
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Entry
107117171 CDS
T04299
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat containing 6B
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107117171 (TNRC6B)
03036 Chromosome and associated proteins [BR:
gja03036
]
107117171 (TNRC6B)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107117171 (TNRC6B)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107117171 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
107117171
NCBI-ProteinID:
XP_015274723
LinkDB
All DBs
Position
Un
AA seq
1859 aa
AA seq
DB search
MPETDMAWFATPEMEHEDFVMEGHGKTPPPGEENKQEKEQEKEEQLMEDKKRKKEDKKKK
ESTQKVTDQKTKVPEATKPSLSQPVTASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAARY
MPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGSGVGPPPSPAPGANPNNAQPVTGVLLP
CDSGTATDSTTGGAAASNYANSTWGPGASSNSNNANPTHVWDKVIVDGSDMEEWPCIASK
DTESSSENTTDNNSASNPGLEKSTLPGSTTSNKGKGNQCQSVSSGNECNLGAWKSDPKAK
SVQSSNPAADSNNGLASWRNLSGQDRIGPSSGFSNFNPNSNPSAWPALIQEGNSRKGISE
SDNGSSNAQISTAGQTSREQQSKMENAGVNFVSGREQAQIHNTDGPKNGNTNSLNLSSPN
PMENKGMSFETGFGNASRSTDAPSQSTGERKTGSVGSWGTVRGPSGLDSVSGQSNSGNHG
NNGKDREDSWKGASVQKSNGSRNDSWDNGNRSTGDGSWTFGPQHSSESKWSEGNKMTSGV
SQGEWKQPSGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNSQAPCWGRSSSSTG
SEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWGQT
QIKQDTVWDIEEMPRPEGKADKGTEGWENSAIQTKSSGGWGDAPSQSNQIKSGWGELSTP
TEWKEPKNTGGWNDYKNNCSNWGGGRPDEKVTATWNENSSKDPGWNGRPPNQGWSSGKNG
WGEEVDQTKNSNWESSGNKSMSGWGEASQNEIGTWGNGANVNCSSKGGWDNNKRAPAWND
TGRQPNSWNNQQQQHHQQPESPGSWGPPPQPPGNGRPPNPNWNSGPQPTASKDEEPSGWE
EPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQGGQPPREQNLPTPRTSKSAPS
VWNKSTPPAPDNGTAAWGEPNETSPGWGEVDDAGASTSWGNGPSAAPNAIKPSNKPSQDG
WGENDGPVSGTRHSSWEEEEEGGVWNTAGSQGSSSSHNSTSWGQGGKKPQIKCSLKGGSS
DSWMNTLSDQISNMGLLNQTEDTPGNKMDLSVGGLQDKKFDVDKRGINLGDFNDIMRKGR
SGFRPPNSKDMGTQDTGPYFEKLTLPFSNQDGCLGDEAPCSPFSPSPNYKLSPSGSTLPN
VCLGAIGSGLNPQNFAARQGGNQGLFGNSTAQSRGMHPPVQPLNPSPNIRAQVPPQFLSP
QVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQQQ
QQQLLQNQRKISQAVRQQQEQQLARMVSALQQQQRQPGMKHSPSHPVGPKPHLDNIVPGS
LNVGLSDLQAKGQIPGYSSGFGSSGVDYGMVGGKETGTESRFKQWTSMMDGLPSVASQDA
NMHKNGTIVPPGKTRGGSPYNQFDIIPGDPLGSHTGHGGDSWLPAKSPPTSKIGSKSSNA
SWPPEFQPGVPWKGIPNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSSLN
TSLPSPGAWPYSASDNSFTNVHSTSAKFSDYKSTWSPDPIGPNPTHLSNKMWKNHISSRN
TTGLPRPPPGLSNPKPSSPWSSTAPRSVRGWGAQDSRLASASTWSDGGSVRPSFWLVLHN
LTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTIL
AEFATDEEVSRFLTQAQPPTPAATPSAPAAGWQSLETGQNQTDPVGPALNLFGGSTGLGQ
WSSGGGSSSGGDLAGASLWGPPSYSSSLWGVQSVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaacagatatggcctggtttgccaccccagagatggaacatgaggattttgta
atggaagggcatggcaagactccacctcctggtgaagaaaacaaacaagagaaggagcaa
gaaaaggaagaacagttaatggaagacaagaaaagaaagaaagaggataagaagaagaaa
gaatctactcagaaggtcacagatcaaaaaaccaaagtgcccgaagcgacaaaaccaagt
ttaagccaaccagtgactgccagcccaattggcagctctccatcgccaccagtcaacggt
ggcaacaatgccaaaagggtggcagtgccgaacggtcaaccgccaagcgccgcccgctac
atgcctcgggaggtgccgccgcgattccgttgccagcaggaccacaaagtgttactgaaa
cgtgggcagccccctccgccatcctgtatgctccttgggagtggagtagggccacctcct
tctccagcacctggagcaaatccaaacaacgcacaaccagtgacgggagtgctgctgccg
tgtgacagtgggactgcaaccgattcaacaactggaggtgctgctgcttcaaattatgca
aattccacttggggtcctggagcctcctccaacagcaacaatgccaacccaactcatgtc
tgggacaaggtgattgtagacgggtctgacatggaagagtggccttgtattgccagcaaa
gatactgagtcttcttccgaaaacaccacagacaacaacagtgcctcaaaccctggcttg
gagaagagcactctgccaggaagcaccactagcaacaaaggaaaaggaaaccagtgccag
tctgtaagctctggtaacgaatgtaatcttggggcctggaaatctgaccctaaggctaaa
tctgttcaatcttccaaccctgcagcagacagtaacaatggtctagcaagctggaggaac
ttgagtgggcaggacagaattggccccagctctggcttcagcaactttaacccaaatagc
aacccatcagcttggccagcactgattcaagagggaaattcaaggaaagggatttcagaa
tctgataatggtagttccaatgcacagattagtacagcaggtcagacttctagggaacag
cagtcaaagatggaaaatgcgggtgttaactttgtctctggcagagagcaggctcaaatt
cacaacactgatggaccaaaaaatggaaacactaactctttgaacttaagttcaccaaac
ccaatggagaataagggaatgtcctttgaaacgggctttgggaacgcctccaggagcact
gatgccccttcacaaagcactggagagagaaagactgggagtgttggatcttggggtaca
gtaagggggccttctggactagacagtgtctctggtcaaagcaattctggaaatcatggg
aacaatggaaaagatagggaggactcatggaagggagcttctgttcaaaaatcgaatggg
tcaagaaatgattcttgggataatggcaacaggtctacgggtgatgggtcttggaccttt
ggccctcaacactctagtgaaagcaaatggagtgaagggaacaaaatgacatcaggggtg
tctcagggagaatggaaacagccgtctgggtctgatgaactgaagattggagaatggagt
ggtccaaaccaaccaaattctagcactggagcatgggacaatcaaaagggccaccccctt
cctgaaaaccaaggcaattcccaggctccctgttggggaagatcttccagctctacagga
agtgaagttggaggtcaaagcactggaagcaaccacaaagcaggaagtagtgacagtcac
aattctggacgtagatcatacaggcctacacatcctgattgccaggctgtcttgcaaact
ttgctgagcaggactgatttggacccccgagtgctttcaaatactggctggggtcaaact
caaatcaaacaggacactgtttgggatatagaagagatgccaaggcctgagggaaaggct
gataaaggaactgaggggtgggagaattctgccatacagacaaagagctcagggggctgg
ggagatgcacccagccaaagcaatcaaatcaagtctggatggggggagctctctactcca
acagagtggaaagagcccaaaaacactggaggatggaatgattacaagaacaattgttct
aactggggtggaggaagacccgatgaaaaggtgacggcaacttggaatgagaattcaagc
aaggatccaggatggaatgggcggccacctaatcaagggtggtcttctgggaagaatggc
tggggagaggaagttgaccaaacaaaaaatagtaattgggaaagttcaggaaacaagtca
atgtcgggttggggtgaagctagtcaaaatgagattgggacttggggtaatggtgcaaat
gtaaattgttcttcaaaaggagggtgggataataataaaagagctccagcatggaatgat
actggtaggcaacccaattcctggaataatcagcaacaacagcaccatcagcagccagag
tcacctggttcctggggcccacctccacagcccccaggtaatgggaggccaccaaatcct
aactggaatagtgggccacagccaactgcctcaaaggatgaggaacccagtggctgggaa
gaaccatccccccaatcaattagtcggaaaatggatattgatgatggcacttcagcgtgg
ggtgaccctaacagttacaactacaagaatgtgaacctgtgggacaagaactcacaaggt
ggacaacctccacgagaacagaacctccctactccaaggactagcaaatcggcaccctca
gtctggaacaaaagcacacctcctgctccagataatggtacagctgcttggggtgaaccg
aatgaaacgagtcctggatggggtgaagtagatgatgcaggggcttctaccagttgggga
aatggaccctccgctgcaccaaatgccataaaacctagtaacaaaccatctcaagatggc
tggggggaaaacgatgggccagtatctggaacacggcattccagttgggaagaggaagaa
gagggaggagtctggaacacagcaggctctcagggaagcagttcctcccataattcaaca
agctggggacaaggaggaaagaaaccacaaatcaagtgttcgttaaaagggggcagtagt
gattcgtggatgaatactttatcggatcagatttcaaatatgggattgctgaatcaaacc
gaggacactccaggcaataagatggacttatctgtgggtggcctccaggataagaagttt
gatgtggacaaacgaggcattaatctcggggattttaatgacataatgagaaagggccgg
tctggttttcgccctcctaattccaaagacatgggaacccaagatactgggccttacttt
gaaaagctgactttgcctttctccaatcaagatgggtgccttggggatgaggctccctgc
tctcccttctccccttctcccaactacaagctatctccctctggttccacactacccaac
gtctgccttggggcaatcggctcagggctcaacccccaaaacttcgctgctagacaaggg
ggcaatcaaggtctgtttggaaacagcacagcacaatcgagaggaatgcacccaccagtg
cagccactaaatccttcccccaatatccgggcacaagtgcctccccaatttctttctccc
caggtgtctgcctctatgctcaagcaatttcctaacagtggtttgaacccaggtcttttc
aatgtggggcctcaactttctcctcaacagattgctatgctgagccaacttccacagatt
cctcaatttcagcttgcttgtcaacttctcctccagcagcaacagcagcagcagcagcag
caacagcagctgttacagaaccagagaaagatttctcaagctgtgcgacaacagcaagag
caacagcttgcccgtatggtgagtgcccttcagcagcagcagaggcagcctggcatgaaa
cattctccatcccatccagttgggccgaagccacatttagacaacatagtacctggtagt
ctgaatgtgggtctctcagatttacaggccaaagggcagattcctggatatagttcaggt
tttggctccagtggtgtggattatggaatggtgggagggaaagaaactggaacagaatct
cgctttaaacagtggacttctatgatggatgggttgccctctgtagcttcccaagatgcc
aatatgcacaaaaatggcacgattgtgccccctggaaaaactcgaggggggtcaccctac
aaccaatttgatataatccctggtgatccactgggcagccacacaggtcatggtggtgat
agctggttacctgccaaatctccaccaacaagtaagattggaagcaaatccagcaatgcc
agttggcctccagaatttcagccaggagtgccgtggaaaggtattccaaacattgaccct
gaatctgacccctatgtgaccccaggaagtgtactggggggtacagccacatcccccatt
gtagatactgatcaccaacttctgcgggacaacaccacagggtctaattcttccctcaac
acctcgctgccttcacctggtgcctggccctacagtgcctctgacaattccttcacaaat
gttcatagcacttcagcaaagttcagtgattataaatcaacatggtccccagatcccata
ggacccaatcccactcatctctccaacaagatgtggaaaaaccatatttcctcaagaaac
actacagggctgccccgcccacctcctggtctgagtaatccaaaaccatcctctccctgg
agcagcacagcaccccgctcagtcagggggtggggggcacaggattcgaggcttgcctct
gcctctacctggagcgatggtggatcagttcgccctagcttctggctggttcttcacaat
ctcactccacagattgatgggtcaaccctgaggaccatctgcatgcagcatggtccactg
ctgacattccatctgaacctgacccaaggcaccgcccttatccgatacagcaccaagcag
gaggcagccaaggcccagactgcactgcacatgtgcgttttgggaaacactaccatcctg
gctgagtttgccacagatgaggaggttagtcgctttctgacacaagctcagcctcctact
cctgcagcaacacccagcgcacctgcagcaggctggcagtctctagagacaggacagaat
cagacagatccagttggacctgctttgaatctttttggtgggtcaacagggcttgggcaa
tggagcagcggtggtggcagcagcagtgggggtgaccttgctggtgcttcgttatggggc
cccccaagctattcttcaagtttgtggggggttcaaagcgtagaagatccccacaggatg
ggaagccctgctcccttactacctggagaccttctaggcggagggtcggattcaatctga
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integrated database retrieval system
