Gekko japonicus (Schlegel's Japanese gecko): 107117333
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Entry
107117333 CDS
T04299
Symbol
VARS2
Name
(RefSeq) valyl-tRNA synthetase 2, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107117333 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gja01007
]
107117333 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gja03016
]
107117333 (VARS2)
Enzymes [BR:
gja01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
107117333 (VARS2)
Amino acid related enzymes [BR:
gja01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107117333 (VARS2)
Transfer RNA biogenesis [BR:
gja03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107117333 (VARS2)
Prokaryotic type
107117333 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1b
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
107117333
NCBI-ProteinID:
XP_015274914
LinkDB
All DBs
Position
Un
AA seq
1084 aa
AA seq
DB search
MPSAQLNSSTSRRLHSLCRLLLSKKRSWEVPGGWKAYSQANKPDPSKQAGKTSHLKNRAE
KQKRQRERMESIEVRMATGLKKELPRQTKTLALKSEVLYDIPTEAGEKKDTSGPLPASYS
PRYIEDAWYAWWVKEGFFKPEYQHQLPHQKPEVFSLSIPPPNVTGSLHLGHALTVAIEDA
VVRWKRMEGCQVLWVPGSDHAGIATQAVVERKIWKERGALRQDLTRKEFLQEVWNWKEEK
GNEILQQLKVMGASLDWDRACFTMDSDFNQAVTEAFVRLHEEGLIYRDRQLVNWSCALRS
AISDIEVENRQLEGWTELSVPGVPGKVPFGVLVTFAYEVEGEEGEELPVATTRPETMLGD
VAVAVHPDDLRYTHLHGKRLRHPFTGQLLPIITDPSVEQDVGTGAVKITPAHSRIDYELG
RRHGLPVVSVIAEDGTMTAECGKWLQGENRFLAREKVLAALKERGLYRDVKEHAMVLPLC
SRSGDVVENLLKSQWFVRCEAMAHRALEAVESRHLKLIPEFHEKNWRTWLSKISDWCISR
QLWWGHQIPAYRVTIPQSLDTGKEGSDELWVVGRTKAEAREKAADMLGEPEEDLKLVRDE
DVLDTWFSSALFPFASLGWPRQTGDLQQFYPNSLSETGSDLLFFWVARMVMLGEQLTGKL
PFSQVFLHPMVRDAHGRKMSKSLGNVIDPLDVIHGASLQDLQEKLQKSNLDPREVAIAME
GQQQDFPGGIPELGTDALRFALCSYSTQGDGINLDVAAVENASRFCNKVLNAMKFTLAAL
GEGFTPLTPEEFFPSSPMDRWILSRLYHTAQECTQRFEKFELHFVTTAVHIFWLHDFCSV
YMESIKPILSSRDPARLLSTRQTLYSCTDLALRLLSPFMPYLTEELWQRLPKVDTASPPS
ICVARYPNTEYLAHWSHPEEEANFLLVQEIIKAVRYLRSKYQLTKARPITYVVCPELAVR
EVYENYQEPLQTLSFAGSLRFFLDPEKAELPVGCVAAKANNHTDIYVDLQGLVDPQKELL
KLRSEQQKLEQQLTGLTIRVQGARYQEQVSLKAKARLQQKISSLHLELEQVKQATETFQK
MAAR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagcccagcttaattccagtaccagccggaggctacattctctctgccgtctg
cttctttccaagaagagaagctgggaggtgcctggtgggtggaaagcatattcccaagct
aataagcctgatcccagtaaacaggcaggtaaaacgtctcatctgaaaaaccgggcggag
aaacagaagcggcaacgggagaggatggaatccattgaagtcaggatggcgacaggcctg
aagaaagagcttccaaggcaaaccaagaccttggctttgaaaagtgaagttctgtatgac
atccccacggaagctggagaaaagaaagatacctcggggccactgcctgcctcctatagc
ccacgctacattgaagatgcttggtatgcttggtgggtgaaggagggattttttaagccg
gaataccagcatcagttgccccatcagaaacccgaagtgttctctctctccatccccccg
ccgaatgtcacggggtccctgcacttgggtcatgctttgactgtagctattgaagatgct
gtggtgcggtggaagaggatggaaggctgtcaagtgctgtgggttccaggttcagatcat
gctgggattgccactcaggctgtggtggaaagaaaaatctggaaagaacggggggccctt
cgccaagacctgacacgaaaggaattcctgcaggaagtctggaactggaaagaagagaaa
gggaatgaaatactccagcagctgaaggtgatgggagcatcgttagactgggaccgggcc
tgtttcaccatggattctgatttcaaccaagctgtgactgaggcctttgtgcgtctacac
gaggagggtctgatctatcgggacagacagctggtcaactggtcatgtgccttgcggtcc
gccatttctgacattgaggtggagaacaggcagcttgagggatggaccgagctctctgtt
ccaggggtcccgggcaaagtgccattcggagtcttggtgacgtttgcttacgaagtagaa
ggggaggaaggcgaggaacttcctgtggccacgacccgcccagagaccatgttgggggac
gtggctgtcgctgttcacccagatgatctccgatacacgcacctgcatggcaagagactc
cgccacccattcactggacagctccttcctatcattactgatccctcggtggagcaggac
gtgggcacaggagctgtgaagataacaccagcacacagccgtattgactacgaactgggg
cggaggcatggccttcctgttgtttctgtcatcgcggaggatggaacaatgaccgctgag
tgtgggaaatggcttcagggggagaacaggttcctggccagagagaaggtgctggctgct
ttgaaagagagaggcctgtatcgggatgtgaaggagcatgccatggtgctccctctttgc
agccgctctggggatgtggttgaaaacctcctgaagagccagtggtttgtccgatgtgaa
gccatggctcatagagcattggaggctgtggaatccagacatttgaaactcattcctgaa
tttcatgagaagaattggaggacttggctttcaaaaatcagtgactggtgtatctcccgc
cagctgtggtggggccatcaaattccagcctatcgagtcaccattccacagtcacttgat
acagggaaggaggggagtgatgaattatgggtagtgggcaggacaaaagcagaagctcgg
gaaaaagcagcagacatgttgggagaaccagaagaggacctgaagcttgtgagagatgag
gatgtcttggacacgtggttctcatctgctctcttccctttcgcctcactgggatggcct
cgtcagactggagacctccagcagttctaccccaacagcctctcggagacaggaagcgac
cttctgttcttctgggtggcccgaatggtgatgctgggagaacagctaactgggaaacta
cctttctctcaggttttccttcacccgatggttcgtgatgctcatgggaggaagatgagt
aaatctctagggaatgtgattgaccccttggatgttattcatggggcctctttgcaggac
cttcaagagaagctgcaaaagagcaacttggacccaagggaggtggccattgctatggaa
ggccagcagcaagattttcctggagggatccctgagcttggcactgatgctctaaggttt
gccctctgctcttattccacacaaggtgatggcattaacttggatgtggctgcagtggag
aatgccagtcgtttctgcaacaaggtcttgaatgccatgaaattcacgttggcagccctg
ggagaagggttcaccccactgacgccagaggagttcttccccagttctcccatggaccgg
tggatccttagccgcctctatcacacagcgcaagaatgcacccagcggtttgaaaaattt
gagctgcatttcgtcaccaccgccgtccatattttctggctgcatgatttctgcagtgtc
tacatggagtccattaaacccatattatccagtagggatccggctcgtctcctctcgacc
cgccagaccttgtacagctgcacggacttggccctgcgcctcctgtctccattcatgccc
tacctgacagaggagttgtggcagcggcttcccaaggtggacacagcatcccctcccagc
atctgtgtggcaagataccccaacaccgagtatctggctcactggagtcatcctgaggaa
gaggcaaacttcctgttagtacaggaaatcatcaaagcagtgcgctatctgaggtcaaaa
taccagcttaccaaagctcggccaataacatatgtggtctgcccagagttggctgttcgt
gaggtgtatgagaactaccaggagccattgcagactctgtctttcgctggttctctgaga
ttcttccttgatccggagaaagcagaactacctgtgggctgcgtagccgcaaaggcaaac
aaccacaccgatatctacgtagatcttcagggactggtcgaccctcaaaaggagctcctt
aaactgagatctgagcaacagaaactggagcagcagctgacaggcctcaccataagggtt
caaggggccagataccaggagcaggtctccctgaaagccaaagcacgcctccagcaaaag
atttcctctctacatttagagctggaacaggtaaaacaggccacagaaacctttcaaaag
atggctgcgagatga
DBGET
integrated database retrieval system
