Gekko japonicus (Schlegel's Japanese gecko): 107117568
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Entry
107117568 CDS
T04299
Symbol
RANBP2
Name
(RefSeq) RAN binding protein 2
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03013
Nucleocytoplasmic transport
gja03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107117568 (RANBP2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107117568 (RANBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107117568 (RANBP2)
03110 Chaperones and folding catalysts [BR:
gja03110
]
107117568 (RANBP2)
04121 Ubiquitin system [BR:
gja04121
]
107117568 (RANBP2)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107117568 (RANBP2)
Chaperones and folding catalysts [BR:
gja03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
107117568 (RANBP2)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107117568 (RANBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
ANC1_spectrin
Tudor_FRX1
DUF2383
DUF2408
Zf_1st_IFT121
Motif
Other DBs
NCBI-GeneID:
107117568
NCBI-ProteinID:
XP_015275196
LinkDB
All DBs
Position
Un
AA seq
1587 aa
AA seq
DB search
MHGFGDQFTLKKDQWDCNICLVRNKESAQKCIACQNPKPLDKATVAVTPQTESTVAFRPN
TESAQSTFGPISAKTENQWECRVCCVRNEASVSHCSGCKNPSGTNAPVFGPQATFKFGQT
DTPKVQQSDFGAAFLKKEGEWDCSTCLVRNKASSATCAACQTPNPCSNALCLPADTVPPT
FGFKSKLSEPTKGPLGTGFKSNISEQGFKFGHSLEQEKSSSFMFQIPSGAEAKPIKSGFN
FSMPVPPGGFKFGIQEPSKGVAKDEQNKEDSLVEKDSEGEGGEKSQDPSSKQSGSLVFGQ
HSSTFTFGDLAKTTAGEGFQFGKKDPNFKGFTGAGEKLFSSQGKTPSKANTSADLDKDDD
SYKTEDNDDIHFEPVVQMPEKVELVTGEEDETVLYSQRVKLFRFDAETSQWKERGVGNLK
ILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDKAWMWLASDFSDGDAKLEQ
LAAKFKTPEQAGDFKQKFEECQRLLLDIPLQTPHKLVDFGKTAELIQKAEEMKSGLKDLK
TFLTDDKTKLADEENRNAVSAASTSDLIIKPHADSTGPTLEWDNYDLRGEALEDGSSSSV
YALPRASSPVRKNLFRFGESTAGFNFSFKSALSPSKSPSKLNQSRTSVGTDEESDVTQED
ERDVQYFEPVVPLPDLVEVTSGEENEQVVFSHRAKLYRYDKAANQWKERGIGDIKILQNY
DTKQVRIVMRRDQVLKLCANHRITPDMNIQPMKGTERAWVWTACDFAEGERKVEPLAVRF
KLQDVADSFKQIFEEARCAQEKEVLITPLSSRANTPKESPCGKIAVAILEETTRERTDLK
LKEETVNEIVETSVVLNTSETPTKAVVSPPKFVFGSESVKSIFNNEKSKPFTFGNTSATG
SLFGFSFNAPPKSPSDSSVCQTTVQKEPGDMFGTVNCKAAGHQGGGGWKPSDGKDIQMAT
SKMEGLSNFSFKIPEKAEVKKEPDTVTSDDVLIVYELTPTPEQRVLADSLRLPPTFFCYK
NKPGYLSSDDDDDEDYETAVKNLNGKLYPNEPKEPTRSKETDGGITRENEAESGSDCVLV
WEKKPTPEEKAKAETLKLPPTFLCGISSDTEEDNDNLEDFQTELKKIQETKEAQTGEFTS
SGDAKTTMEGAPVAAASRNEESYSATESIQMTHTLLETDDTPVDLSTKKENAQGSSASTT
QENQPFSFDLGNIHGLSFADLASNNSGDFAFGSKDKNFKWADTGATVFGAQPASKGENEE
DGSDEEVVHSDDIHFEPIVSLPEVEVKSGEEDEEILFKERSKLYRWDREVNQWKERGVGE
IKILFHTQKKCYRVLMRRDQVLKVCANHIITKAMELKPLNTSNNAMVWTATDYADGEAKV
EQLAVRFKSQELADTFKRRFEECQQSLSELQKGHVSLAAELSKETNPVVYLDISTDNELL
GRITMELFSNIVPRTAENFRALCTGEKGFSLRNSTFHRIIPGFVCQGGDITKQDGTGGRS
IYGDKFEDENFEIKHTGPGLLSMANRGRDTNNSQFFITLKKAEHLDFKHVVFGFVKDGMD
VVKQIESFGSPKGTVSKTIVITDCGQI
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgcatggatttggtgatcagtttacattgaagaaagatcagtgggactgtaatatatgc
ctggttaggaataaagaaagtgcacagaagtgtatagcatgtcagaatccaaagccactt
gataaagcgacagtggctgtgacgcctcagacagaatctactgtggctttccgaccaaat
actgaaagtgcacagagtacatttggacccatttctgctaaaacagaaaaccagtgggaa
tgcagggtctgttgtgtaagaaacgaagccagtgtatctcattgtagtggctgcaagaat
cccagtggaactaatgcaccagtgtttggtccccaagccacattcaaatttggccaaaca
gatactccaaaggtccaacaaagtgactttggggctgcttttttgaaaaaggaaggtgaa
tgggactgcagtacatgcttagtacgaaataaagcttcttcagcaacttgtgcagcttgt
cagactccaaatccatgtagtaatgcactgtgcctacctgctgatactgtgcctcctaca
tttggcttcaaaagcaagttatcagaacccaccaaaggacctctagggacaggtttcaag
agtaacatttcagaacaaggttttaaatttggccattctctagagcaagagaagtcttct
tccttcatgtttcagattccttctggtgcagaagctaagcctataaagagtggatttaat
ttttcaatgcctgtccccccaggtggatttaaatttggtatacaagagcctagcaaaggt
gttgcaaaagatgaacagaataaagaagacagtcttgttgaaaaggactccgagggagag
ggtggtgaaaaatctcaagatccgtctagcaaacagagcggcagtttagtttttggacaa
cacagcagcactttcacttttggagatcttgcaaaaacaacagctggcgaaggatttcag
ttcggtaaaaaggacccaaattttaagggatttacaggtgcaggtgaaaaactcttttct
tctcagggtaaaactccttccaaagcaaatacttctgccgatcttgataaggatgatgat
tcatataaaacagaagacaatgatgacattcactttgaacctgttgtccagatgcctgaa
aaagtggaacttgtcactggtgaagaggacgagacagtgttatactcacaaagagtaaaa
ttatttaggtttgatgcagagactagccagtggaaagaacggggtgtgggtaacttgaaa
attcttaagaatgaagttaatggcaagttgcggatgctaatgcgacgtgagcaggtgcta
aaggtctgtgcgaaccattggatcacgaccaccatgaacctgaaacccctgtctggctcg
gacaaagcatggatgtggctagccagtgacttttctgatggtgatgcaaagctggagcaa
ttggcagctaaattcaaaactccagagcaagctggggatttcaaacagaaatttgaagaa
tgtcaaaggctgctgctggacataccactgcaaactccgcacaaacttgtggactttggg
aaaacagctgagctcatacagaaagcagaagaaatgaaaagcgggttgaaagatctcaaa
actttcctgacagatgataaaactaagcttgcagatgaagaaaacagaaatgcggtttct
gctgctagcacttctgatttgattataaaaccacatgctgacagcactgggcctacatta
gaatgggataactatgacttgcgtggggaagcactggaagacggttccagtagttctgtc
tatgcattgcctcgagccagtagccctgtgaggaaaaacctgttccggtttggagagtct
acagcagggtttaactttagcttcaaatctgctctgagtccctcaaaatcgccttccaag
ctcaaccaaagcaggacttctgtaggcacagatgaggagtcggacgttacccaagaagat
gaaagagatgttcagtacttcgaaccagtagtacctttacccgaccttgtagaagtaaca
agtggtgaagaaaatgagcaagttgtcttcagtcaccgagccaagctctacagatacgat
aaagctgccaatcagtggaaagagagaggtattggggatataaagatcttgcagaattac
gacactaagcaagttcgtatagtcatgagaagggatcaggtgttaaagctttgtgccaat
catagaataaccccagatatgaacatccagccaatgaagggaacagagagggcatgggtg
tggactgcatgtgactttgctgaaggggaaagaaaagtagagcctttggccgtgcgattt
aagttgcaagatgttgctgactcctttaagcaaatttttgaggaagcaagatgcgctcaa
gaaaaagaagttttaatcacaccgctcagttcacgtgctaatactccaaaagaatctcca
tgtggaaaaattgctgttgccatactggaagaaaccaccagggagagaacagatttaaag
ctaaaagaagagacagttaatgaaatagtagaaacgtcagtagtgctaaatacttctgag
acgccaacaaaagcagtggtttcacctcccaaatttgtgtttggctcagaatctgtcaaa
agtatttttaataatgagaaatcaaagcctttcacatttggaaacacatcagcaacagga
tctttatttggtttcagttttaatgctcctcccaagagcccgagtgatagttcagtatgt
caaaccacagtacagaaagaaccaggggacatgtttggcactgtaaactgcaaagctgct
ggacatcagggaggtggtggctggaaaccctctgatggcaaagacattcaaatggctacc
tccaaaatggaaggactttctaacttttcatttaaaattccagaaaaagctgaggttaag
aaggaaccagatactgttacttcagatgatgtattgattgtttatgaattaacacccact
cctgaacaaagagttcttgcagactcccttagattaccaccaacattcttctgctacaag
aacaaacctggctatctaagtagtgatgatgatgatgatgaggactatgaaacagcagtg
aagaatcttaatggaaagttgtatcctaatgaacctaaagaacccacaaggtcaaaggaa
accgatggaggtatcacaagagaaaatgaggcagaaagtggaagtgattgtgttctagtc
tgggaaaagaaaccgactcctgaagaaaaggctaaagcagagacactgaagcttcctcca
acatttctctgtggtattagcagtgatactgaagaagacaatgacaacttggaagacttt
caaacagaacttaaaaaaattcaagaaactaaagaagctcaaacaggtgaattcacaagt
tcaggtgatgcgaagaccactatggaaggtgcacctgttgcagccgccagtagaaatgaa
gaatcatactctgctacagaatctatacagatgacacatactttattggaaacagatgat
acacctgttgatttgtcaactaaaaaagaaaatgctcaaggttcttcagcgtccaccacc
caggaaaaccagcctttctcgtttgaccttggcaacatacatggcttgtcttttgctgat
ttggcctcaaataattctggggattttgcttttggctctaaagacaaaaacttcaagtgg
gcagatacaggagcaactgtgtttggagcacagccagcttccaaaggagagaatgaagaa
gatggaagtgatgaagaagttgtacatagtgatgatattcattttgaaccaatagtgtct
ctgccagaggttgaggtgaagtcaggagaagaagatgaagaaattcttttcaaagagagg
tcaaaactctacagatgggacagagaagtcaatcagtggaaagaacgtggtgtgggagaa
ataaaaatcttgttccatacacagaagaaatgctatagagttttaatgagaagggaccaa
gttcttaaagtctgtgcaaaccatataatcacaaaagcaatggaattaaaacccttgaat
acctcaaacaatgctatggtttggactgctacagattatgcggatggtgaagctaaagta
gaacagctggcagtcagatttaaaagccaagaactagctgataccttcaagaggaggttt
gaagagtgtcaacaaagtttatcagagctacagaaaggccacgtatccctagcagcagaa
ctgtcaaaagaaactaaccctgtggtatatcttgacatttctactgacaatgaacttcta
ggtcgtataaccatggaattgttttcaaatattgttcctcgaacagcggagaacttcaga
gcactgtgcacaggagaaaaaggatttagtttaagaaactccacatttcacagaataatt
ccaggttttgtctgtcagggaggtgacatcactaaacaggatggtaccggaggacgatct
atttacggagataaatttgaggatgaaaacttcgaaataaaacacactggccctggctta
ctgtccatggcaaatcgtggcagagacaccaataattctcagttttttattactctaaaa
aaggcagagcacttggactttaaacatgttgtatttgggtttgtgaaggacggcatggat
gttgtgaagcaaatagaatcttttggcagtcctaaaggaacagtgtcaaaaacaattgtg
attacagactgtgggcaaatataa
DBGET
integrated database retrieval system
