Gekko japonicus (Schlegel's Japanese gecko): 107117980
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Entry
107117980 CDS
T04299
Symbol
HFM1
Name
(RefSeq) HFM1, ATP dependent DNA helicase homolog
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gja03036
]
107117980 (HFM1)
Enzymes [BR:
gja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107117980 (HFM1)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Meiosis-specific proteins
Others
107117980 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
107117980
NCBI-ProteinID:
XP_015275669
LinkDB
All DBs
Position
Un
AA seq
1432 aa
AA seq
DB search
MAAFTAKAGSPEALGFSVALMPWMPETSCSLSQAVADLEEPFTSDITSWESEASRSTEHG
QDASGGQHSQYKALPFDLSSSLRVFTKVAVAFMRQQGIHIYPYLYNILIKTKNTDSITRD
TTVTMQGFQMHAFLVNLQKSHIDLSRDIMHLGTRIKMSLFKPTDYTYANTDCKENTNAKR
GIDAYCNISNNKGMKMGDLWKNNTQIAQYSDFNLFSVNDIFSASANGEGIEKVQSFPCVS
KSSSVEGTAKKELMILRPVTEIPAQFRNIFKEFPYFNYIQSKALDDLLYTDRNFVICAPT
GSGKTVMFELAITRLLIKEPMPWLNIKIVYMAPIKALCSQRFEDWKEKFGPIGLVCKELT
GDTAMDDLFEIQHAHIILTTPEKWDSMTRKWRDNSLVQLVKLFLIDEVHVVKDESRGATL
EVVVSRMKTVQSSLSHSSENHDTVRPMRFVAVSATIPNAEDIAEWLSDGKNPAVCLKIDE
RHRPVKLRKIVLGFPCSSNQTEFKFDLTLNYKVASVIQTYSEQKPALVFCAKKKGVQQAA
SVLAKDAKFIMNIEQKQRLQKSANSVKEARLRDLLICGVAYHHAGMEVSDRKIIEATFTM
GDIPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFQEYSETDILQMIGRAGRPQFDTTA
TAVIMTRLNTRDKYVQMLNGADTIESSLHKHLTEHLNAEIVLYTITDVNIALEWIRSTFL
YIRALKNPAHYGFSVGFDRTAIEAKLQELCLKNLNDLSSFDLIKMDEELNFKPTETGRLM
AWYYIAFDTLKKCFIIKGTETLSELVTLISCCNEFSDIKLRTNEKKILNTLNKDKNKISI
RYPMDGKIKTREMKVNCLIQAQLGCLPIQDFTLTQDIGKIFRNGIRVTKWLSEFLSSHQN
NFLVLLNALILAKCFRCRLWENSLYVSKQLEKIGVTLSNAMVNAGLTSFRKIEDTNAREL
ELILNRHPPFGNQIKDSIAHLPKYELTVQQLPKYTETIAEILVSVILTNFEQLQIKRIAP
DYHYVTLIIGDDDNQVVFKQKITDSAMLKVGNWTKKVEVRRAVKSEELTINLISSEYVGL
DIQQKFKAVYIGPKWYGNETIIINGNLEGECSSDSSPATRINKGATCNQEVLNIKHGNRK
CNHHCKNKEICGHDCCKIGVSKKSELRKEPKFSSYLADLRTRDAVSAVPPVKQLKMNVST
KSQNVQLKQFGYTPKSLLPRLSRSEYAPHSEFTLLDEGNEPVSGRVQLQPEDFKDTEPLN
VNFELGDEVWDDYDEGNLVHASGFTADMENSEPSHLGPINTFLQSSGRSKYHFQDTQRKY
PDAHLKSFYTLKEKFDICLQNSDFSSLSPPSSYVKSPTKYGNKNTFDFQEGKDSPPQLTT
GSEAVSGSYRFNTKGDFFICNKGMKKEADLRDHLPDDDDDLRPFLGIFDGIF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggctgccttcacggcaaaggcaggaagtccagaagctttgggtttctctgttgcttta
atgccatggatgccagaaacctcctgcagcctttctcaagctgtggcagacttagaggag
ccttttacgtctgatatcacctcctgggaatcagaagcttccaggtccacagagcatggc
caggatgcgtctggaggccagcattctcagtacaaagcactcccatttgacctctcttct
tcactgagagtgttcacaaaagtagcagttgcctttatgagacaacagggaatacacatt
tacccttatttatacaatatcctgatcaaaaccaagaatacagactcaataaccagagac
actacagtcaccatgcaggggttccagatgcatgctttcttggtaaatctacagaagagc
catatagatctgtcaagggacataatgcacctgggcaccaggataaagatgagcttattt
aaaccaactgattatacgtatgcaaatacagactgtaaggagaacaccaatgccaagaga
ggaatagatgcatactgtaatatttctaacaacaaagggatgaaaatgggagacctatgg
aaaaataatacgcagattgcacaatattcagattttaatctgtttagtgtaaatgatatt
ttttctgcttctgcaaatggagaaggaattgaaaaagtacagtcatttccttgtgtttca
aagagctctagtgtagaaggaacagctaaaaaggaattgatgattttgcgacctgtgact
gaaatccctgctcagtttagaaatattttcaaagagttcccatactttaattatattcag
tccaaggctctggatgatctcctttatacagacagaaattttgtgatctgtgctccaact
ggttctggaaaaactgtgatgtttgagcttgcaattaccaggttattaatcaaagagccg
atgccttggttaaatattaaaattgtctatatggctccaataaaagctctctgcagtcag
cgttttgaggactggaaagaaaaatttggacccattggacttgtctgtaaggaactaaca
ggagatacagcaatggatgacttatttgaaatacaacatgctcacattattttgactaca
ccagaaaagtgggacagcatgactagaaagtggagagataattctttagttcagctagtg
aaattgtttctcattgatgaggtacatgttgtgaaagatgaaagccgtggtgctactctt
gaagttgtggttagccggatgaaaactgttcagtcttccctttcacatagctctgagaac
catgacacagtccgccctatgaggtttgtggcggtttctgcgacaatcccaaatgctgaa
gatattgcagaatggctttcagatggcaagaaccccgctgtatgcctgaaaatagatgaa
agacaccgaccggtgaagcttcgcaaaatagttcttggatttccctgcagtagcaaccaa
acagaattcaaatttgacttaacgcttaactacaaagtagctagtgttattcaaacgtat
tctgaacaaaaaccagctctcgtgttctgtgccaaaaagaaaggagttcagcaggcagct
tctgtcctagcaaaagatgctaaatttattatgaatatagaacagaaacaaagattacaa
aagtctgcaaattcagtaaaagaagccagactgagagatcttttgatctgtggagtagct
tatcatcatgctggaatggaggtatctgacagaaaaataattgaagcaacttttactatg
ggagacataccagtgctttttactactagtacccttgctatgggtgtaaatttgccagca
caccttgtagttataaaatcaacaatgcattatgctggaggaatgtttcaggagtacagt
gaaactgatattttacaaatgattggaagagcagggagaccgcaatttgatacaacagca
acagcagttatcatgaccaggctaaacacaagagacaagtatgttcagatgttaaatggg
gcagatacaatagaaagcagcttacacaagcatcttactgaacacttaaatgctgaaata
gtgctgtacaccatcactgatgtgaacatagctttagaatggatacgatcaacattcctc
tacataagagctttgaagaatccagctcactatggtttttcagttggattcgacagaact
gcaattgaagcaaaattacaagaattatgtttgaagaatttgaatgatttatcatcgttt
gatctaatcaagatggatgaagaacttaatttcaaaccaacagaaactgggagactaatg
gcttggtattatattgcatttgataccctgaaaaagtgtttcataattaagggaacagag
actttatctgaactggtcacgttgatatcctgctgtaatgaattttcagacatcaagtta
agaacaaatgagaaaaaaatactgaatactttgaataaagacaagaacaagataagcata
agatatccaatggatggaaaaataaaaacaagagaaatgaaagtgaactgtcttattcag
gcacagctaggatgccttcccatacaagattttacattgacacaagatataggcaagatt
ttcagaaatggcataagagttacaaaatggttgtctgaatttctgtcctcccatcaaaac
aacttccttgtattattaaatgctttgattttagcgaaatgcttcaggtgtagactgtgg
gaaaactcactgtacgtatctaaacaactggaaaaaattggtgtgacattgtcaaatgca
atggtgaatgcaggcctgacgtcttttagaaaaatagaagatacaaatgcaagggaactt
gaattgattttgaataggcatcctccttttggaaatcaaatcaaagattccatagctcat
cttccaaagtatgaacttactgtacaacagttgccaaaatacactgaaacaattgctgaa
atcttagtgtcagtcatattaaccaactttgagcagttgcagataaagagaattgctccg
gattatcactatgtaactttaataataggagacgatgataatcaggtggtttttaagcaa
aagattacggattctgctatgctaaaagttggaaattggactaaaaaggttgaagtaagg
agagctgttaaatctgaggagcttaccataaatctaatcagttctgaatatgttgggcta
gatattcagcaaaaatttaaagctgtttacataggaccaaagtggtatggaaatgaaaca
attatcataaatgggaacttagaaggtgaatgttcatctgatagctcaccagcaaccagg
attaataaaggagctacttgtaaccaagaggtcctcaacataaaacatgggaacagaaaa
tgcaaccatcactgtaaaaataaagaaatatgtggacatgactgctgtaaaattggagtg
tcaaagaaatctgagttgaggaaagagccaaaattttcttcatatcttgctgatttgagg
acccgggatgctgtatctgctgttcccccagtcaaacaattaaagatgaatgtgtcaact
aaatctcagaatgtgcagcttaagcaatttggttatactcctaaatctttacttccaaga
ttgtcaaggtcagaatatgcaccgcattcagagtttactttattagatgaggggaatgaa
cctgtttctggaagagttcagctgcaacctgaagatttcaaagatactgagcctttgaat
gtgaactttgaattaggagatgaggtttgggatgattatgatgaagggaatttagtacat
gccagtggttttactgctgatatggagaattcagaaccttctcacctgggacctataaac
acattccttcagagctcaggaagatctaaataccatttccaggatacacagaggaaatat
ccagatgcacatttaaaaagtttttacacattgaaagagaaatttgatatctgcctacaa
aattctgacttttcctcattgagtcctccatcatcatatgtgaaatcacctaccaaatat
ggaaataaaaacacttttgactttcaagaaggaaaggattctccaccacagttgactaca
ggctcagaagcagtctcaggatcttacagattcaatacaaaaggggacttctttatatgt
aacaagggaatgaaaaaagaggctgatctcagggatcacctccctgatgatgatgatgat
ctgaggccttttcttggaatatttgatggcattttctaa
DBGET
integrated database retrieval system
