Gekko japonicus (Schlegel's Japanese gecko): 107118181
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Entry
107118181 CDS
T04299
Symbol
CHD8
Name
(RefSeq) chromodomain helicase DNA binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107118181 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gja03036
]
107118181 (CHD8)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107118181 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
107118181
NCBI-ProteinID:
XP_015275945
LinkDB
All DBs
Position
Un
AA seq
2476 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDESFSQGAPDPIEEALGLPGGALDSLAGGPKEQQAPSQA
EAPQPQTLALPDAQSEAAPELPQQDQPGLLQAPQDQEVLSQGNPFMGVSAATATTPAVVP
SSSTGAQQAAAPPPTPKIVILKAPAGGSVTGAHVAQIQAQPIGAANGGKVTFAKVLTGTP
LRPGVSIVSGNAVLATKVSPGAGAPATLHRLVQPGRPVKQLVLQPVKSQAGGAAGATPLK
PAVTLTSTPAQGESKRITLVLQQPPTGGGPPGQRHVVLGSLPGKIVLQGNQLAALSQAKG
TPGQPAKVVTIQLQVQQPGQQQQPMPGGQPGTQKIQLLQQPPANASGPQAPLSISSVQQA
QVVGGSGQRVTVPLKVVLQPQASSSQGSSSGLSVVKVLSSSEVAALPSSSGTTRSSSDES
RKLEHQKKQEKANRIVAEAIARARARGEQNIPRVLNEDELPSVRPEETGERKRRRKGGGE
RVPKEERPRKGRGQGGSGKSKGRGKPSTITPVVGKKRKRNASSDNSDAEVMPAQSPREEE
ESSVQKRRSNRQVKRKKYTEDLDIKITDDEDDEELDVTGPIKTEQPPAPEPPAPEPIPEG
ETMPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPNGQFTEAEEFFVKYKNYSYLHCEWA
TIAQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEVDRILDESHSIDKDNGEP
VIYYLVKWCSLPYEDSTWELKEDVDEGKVREFKRIQSRHPELKRVARPQAGSWKKLELSH
EYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIRGPFL
VIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDAL
ITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNT
VEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP
KQETIIEVELTNIQKKYYRAILEKNFNFLSKGAGHSNMPNLLNTMMELRKCCNHPYLING
AEEKILTEFRDSCHHHVPHDFPLQAMVRSSGKLVLIDKLLPKLKAGGHKVLIFSQMVRCL
DILEDYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAAD
TCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVL
QSMSGREGSIAGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQILLRRTTTIT
IESEGKGSTFAKASFVASENRTDIALDDPNFWQKWAKKADLDLDMLNSKNNLVIDTPRVR
KQTRHFSTLKDDDLVEFSDLESDDDDRPRSRRHDRHHHPLHHSYGRTDCFQVEKQLLVYG
WGRWREILSHGRFKRRMSERDVETICRAILVYCLMHYRGDENIKGFIWDLISPVENGKAK
ELQNHSESHGPALSSLPVPRTGLSIPVPRGRKGKKVKSQTTFDVQKAEWIRKYNPDTLFQ
DEGYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKALAGSVASEIDIWFPLVDQAEVPT
AWWDAEADKSLLLGVFKHGYEKYNTMRADPALCFLEKAGRPDEKAIAAEHRLDVGEGVDF
DKDCEDPEYKPVGGPAKEQEDEPDPLMMMDEEISVVDGEEGQPGNLFWPPTSALTARLRR
LITAFQRSYKREQLKMEAAERGDRRRRRCEAAFKLKEMVRREKQQRWTRREQSDFYRVVS
TFGVEYDPDTMRFHWSRFRALARLDKKTDESLTKYFHGFVAMCRQVCRLPPAVGDESPDP
TLFIEPITEERASRTLYRIDLLRRLREQVLCHPLLEERLALCQSPGPEMPVWWQCGRHDG
ELLRGAARHGLSQTDTTIMQDPDFSFLSARLSHLHSRAGGTGTPPPPPPPPPPQPPSPLA
LPAAVATTTASSVLLPPPLHELPTPQQPPALPFKPDSADDSDSELDLSKISASSSCSSSS
GCSDDSEGEEASCGGKLFEEEESLLSLPTSHEGNSPQPSASDLLLQERQRAHEWPKDRVL
INRIDMVCQAVLSGKWPSAQSQVGACVGQGESLPRLHGEYTNSPIPHICPLASQEEGATS
FTRLRHGGQEKEFTVQIKDEEGIKLTFQKHRLVPNGTMRDRPAVTQKKSSKKMVELELQC
LEALRGPDIDFEARIPVVNKTDGTLLVGDAAPRRADLEVWLQTHPEFTVDPRFLAYMEER
RKHRWPRFPKPVPIEPSCLVGLERMQAAGLSANGKKGFMPDSTMNRLLPGAVGAEGAQKR
GRQTPLEFSNMMALMGAGRVQLGATGPLSLHHAHFQPGPAHGSPISYMPFSTAAATASSS
SGALLHPALGHAGFAAGHLHLGHPQPVDEDEEEDEMDDLSQGYASSERDFSLLDDDPMMP
ANSDSSDEEGEEEGDD
NT seq
7431 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccccatcatggacctctttgacgatcccaatctttttggcctggactcgctg
accgacgagagcttcagccagggggcccctgaccccatcgaagaggccctgggactgccg
ggcggtgctttggactccttggcaggtgggcccaaagaacagcaggccccctcccaggcg
gaggccccccagccgcagaccctggccctcccggacgcgcaatccgaggctgcccccgag
ttgccccagcaggaccaaccggggctcttgcaggcccctcaggaccaggaggttctcagc
caaggcaacccattcatgggagtctctgccgccaccgccaccacaccggccgtagtaccc
tcttcctccaccggggcccagcaagcagcggcaccccctccaaccccgaagattgtcatc
ttgaaggcgccggcgggtggctcggtgacaggcgcccacgtcgcccagattcaagcccag
cccatcggggcggccaacgggggcaaagtgaccttcgccaaggtgttgacgggtaccccg
ttgcggccgggggtctccatcgtctcgggcaatgcggtgctggccaccaaagtctccccc
ggagccggggccccggccacgctgcatcgtctcgtccagcccggtcggcccgtcaagcag
ctggtgttgcaacctgtcaagagccaagcaggaggggccgcgggggccacgccgctgaaa
ccggccgtgacgctgacgtcgacccctgcgcagggggagtccaagcgcatcactctggtt
ctccagcagcccccgacggggggaggcccaccgggccagcgccacgtcgtcctgggcagc
ctgccaggcaagatcgtgctccaggggaaccagctggcggctctgagccaggccaagggg
accccggggcagccggccaaggtggtcaccatccagctccaggtccagcagcccggacag
cagcagcaacccatgccagggggccagcccggcacccagaaaatccagctcctgcagcag
cctccggccaacgcctccggcccgcaggccccgttgagcatctcttccgtgcagcaagcc
caggtggtggggggctcggggcagagagtgacggtgcccctgaaggttgtgttgcagcca
caggccagctcctcgcaaggcagttcctctggcctctcggtcgtcaaggtgctgagtagc
agtgaggtggcggccctcccgtcctccagcgggacgacacggagcagctcggacgaatcc
cgcaagctggagcaccagaagaagcaggagaaagccaaccggatcgtggccgaggccatc
gcccgggcccgagcgcggggcgagcagaacatcccccgcgtgctgaacgaagacgagctg
cccagcgtgcgccccgaggagacgggcgagcgcaagcggcgccggaagggtggaggcgag
cgcgtccccaaggaggagcggccccgaaagggcagaggccagggggggtccggcaagagc
aaagggcgggggaagcccagcaccatcacaccggtggtggggaagaagcggaaacgaaac
gcctcttccgacaattcggatgccgaggtgatgccggctcagtccccgcgtgaggaggaa
gaaagcagtgtccagaagcggcgctccaaccggcaagtgaaacggaaaaagtacacagag
gacctggacatcaagatcaccgacgatgaggacgacgaggagctggacgtgacggggccc
atcaagaccgagcagcccccggccccggaacctcccgccccggagccgataccggaaggg
gaaacgatgccttccatgcagttctttgtggaaaaccccagtgaggaagacgccgctatt
gtagacaaagtgttatccatgcgggtggtgaagaaggagctccccaatgggcagttcacc
gaggcggaagaattctttgtgaaatacaagaactattcctacttgcactgtgaatgggcc
accatcgctcagctcgagaaagacaagcggatccaccagaagctaaagcgctttaagacg
aaaatggcacagatgaggcacttcttccacgaggatgaggagcctttcaacccggactac
gtggaggtggaccgtatcctggacgagtcgcacagcattgacaaggataacggagagccg
gtcatctactacctggtgaaatggtgttcgctgccctacgaggacagcacgtgggagctc
aaggaagacgtggacgaggggaaagtccgggagttcaaacgcatccagtccaggcaccct
gagctcaagcgggtggctcgcccccaggcaggttcctggaagaagctggagctttcccat
gagtacaaaaacggcaaccagctgcgagaatatcagctggagggtgtgaactggctgctt
ttcaactggtacaacaggcaaaactgcatcctggccgacgagatgggtctgggcaaaacc
atccagtccatcgccttcctccaggaggtttacaacgtgggcatccgagggcccttcctg
gtcatcgccccgctctccaccatcaccaactgggagcgggagttcaacacgtggaccgag
atgaacaccatcgtctaccacggcagcctggcctcccgccagatgatccagcagtatgag
atgtactgcaaagactcccggggccgcctgatcccgggcgcgtacaagtttgatgccctg
atcaccaccttcgagatgatcctctctgactgcccggagctgcgggagatagagtggcgc
tgcgtcatcatcgacgaagcccaccgcctgaagaaccgcaactgtaaactgctggacagc
ctcaagcacatggacttggagcacaaagtgttactgactggcacccccctgcagaacacg
gtggaagagctcttcagcctcctgcacttcctcgagccctcccagttcccctcagaatcg
gagttcctcaaggactttggtgacctcaaaactgaggagcaggtccagaagctgcaggcc
atcctgaagcccatgatgcttcggcggctgaaggaggacgtggagaagaacttggctccc
aagcaggagacaatcatcgaggtggagctgacgaacatccagaagaagtactaccgggcc
atcttggagaagaacttcaacttcctctccaagggggccggtcacagcaacatgcccaac
ctgctcaacaccatgatggagctacggaagtgttgcaatcacccctacctcatcaacggt
gcagaggagaagatcctgaccgagttccgggactcctgccaccaccacgtgccccatgac
ttccccttgcaggccatggtgcgttcctccgggaagctggtgctgatcgacaagctgctt
cccaaattaaaagctggcgggcacaaggtgttgatcttctcccagatggtccgatgcctt
gacatcctggaggactacctcatccagaagaggtacctgtacgagcgcatcgacgggcgg
gtacgagggaacttgcgccaggcggccatcgaccgcttcagcaagcctgactccgatcgc
ttcgtcttcctgctctgcacgcgggccggagggctggggatcaacctgacggcggccgac
acctgcatcattttcgactctgattggaacccccagaatgacctgcaggcgcaggctcgc
tgccaccgtatcgggcagagcaaggcggtgaaggtctaccggctcatcacccgtaactcc
tacgagcgcgagatgtttgacaaggccagcctcaagctggggttggacaaagccgtcctg
cagtccatgagcgggagagaaggcagcatcgctgggatccagcagttctccaagaaggag
attgaggacctgctgcgcaagggggcctacgcggccatcatggaagaggacgacgagggc
tccaagttctgcgaggaagacatcgaccagatcctgctccgccgcacgaccaccatcacc
atcgagagtgaaggcaaagggtccacgtttgccaaggccagctttgtggcgtccgagaac
aggacagacattgccttggatgatccgaacttctggcagaaatgggccaagaaggccgat
ctggatctcgatatgctgaacagcaagaacaacctggtgatcgacactccccgggtgcgg
aaacagacgcgccacttcagcaccttgaaggacgacgacctggtggagttctccgacctg
gaaagcgacgacgacgaccggccgcgctcccggcgccacgaccggcatcaccaccccctc
caccattcgtacgggcgcacggactgcttccaggtggagaagcagctgctggtctatggc
tggggacgctggcgggagatcctgtcacacgggcgattcaagcggcgcatgtccgagcgg
gacgtggagaccatctgccgggccatcttggtgtactgcttgatgcattaccggggcgac
gagaacatcaaaggattcatctgggacctcatcagcccagtcgaaaacggcaaggccaag
gagcttcagaatcactccgagagccatggccctgctctgagctcacttcctgttcctcgg
acaggcctgtccattccggtcccgcggggccgcaaggggaagaaggtgaagtctcagacc
actttcgacgttcagaaagccgaatggattcgcaagtacaacccggacaccctcttccag
gacgagggctacaagaagcacctcaaacaccagtgcaacaaggtgctgctacgggtgcgc
atgctttattacctgcgccaggaggtgattggggaccaggctgagaaggctttggcaggc
agcgtcgccagtgagattgacatctggtttccactggtggatcaggcagaagtccccacg
gcttggtgggatgcggaagctgacaagtctttgctgctgggggtcttcaagcacggctat
gagaagtacaacacgatgcgtgcggaccccgcgctttgcttcttggagaaggccggtcgc
cccgacgagaaagccatcgcggccgagcaccgcctggacgtcggagagggagtggatttt
gacaaggattgcgaggaccccgaatacaaaccggtgggcggccctgccaaggaacaagag
gacgagcctgaccctctgatgatgatggatgaggagatctccgtggtggacggtgaggaa
ggccagccggggaatctcttctggcccccgacctcggcgctcaccgcccgtctgcggagg
ctgatcactgccttccagcggagttacaagcgggagcagctcaagatggaggccgcggag
cgaggagaccggcggcggcggcgctgcgaggccgccttcaagctgaaggagatggtgcgg
cgggagaagcagcagagatggacccgtcgggagcagtcggacttctaccgtgtggtctcc
acatttggagtggagtacgacccggacaccatgcgtttccactggagccgcttccgtgcc
ctcgcccggctggacaagaagacggacgagagcctcaccaagtatttccacggttttgtg
gccatgtgccggcaagtgtgccggctgccacccgccgtgggcgacgagtctccggacccg
acgctgttcatcgagcccatcacggaggagcgggcctcgcgcaccttgtaccgcatcgac
ctcttgcggcgtctgcgggaacaggtgctgtgtcatcccctgctggaggagcggcttgcc
ctgtgccagtcccccggtcccgagatgcccgtgtggtggcagtgcgggcgccacgacgga
gagctgctgcggggggcggcgcgccacggcctcagccagaccgacaccaccatcatgcag
gacccggacttctccttcctgtcggctcgcctcagccacctgcacagtcgggccgggggc
acggggacgccaccgccgccgccccctccgccaccaccgcaaccaccttcgccgctggct
ctccccgcagctgtggctacgaccactgcttcctccgtactcctccccccgcccctgcat
gagctgcccaccccccagcagcccccggcccttcccttcaagcctgactcggccgacgac
tccgactcggagctcgacctcagcaagatctcagcttcttcgtcctgctcctcctcctcg
ggctgctctgacgacagtgagggtgaagaagcctcttgtggcgggaaactgtttgaggag
gaagagtcactcctgtccctccccacttcccacgaaggtaactccccacagcccagcgct
tcagacctgcttttgcaagaacgccagcgtgcccacgagtggccgaaggaccgggtgctc
atcaaccgcatcgacatggtgtgtcaggctgtgctctcggggaaatggccttcggcacag
agccaggtgggcgcctgcgtgggccagggagagagcctcccccgcttgcacggggaatac
accaactctcccatcccccacatctgccccctggcgtcccaggaggaaggggccacgtcc
ttcacccgcctccggcacggcggccaagagaaggagtttaccgtgcagatcaaagatgaa
gaaggaatcaaactcaccttccagaagcacagactggtccccaacggcaccatgagggac
cgtcccgctgtcacccagaagaagagcagtaagaagatggtcgagctggagctgcagtgt
ctggaggccctcaggggccccgacattgacttcgaggcacggatcccggtggtgaacaag
acagacgggacgctgctggtgggcgacgccgctcctcggcgggcggacctggaggtgtgg
ctgcagacccacccagagttcaccgtggaccctcgtttcctggcctacatggaggaacgc
cggaagcaccggtggccccggtttccaaagccggttccgatagagccgagctgcctggtg
gggctggagcgaatgcaggctgccggcctctctgccaacgggaagaagggttttatgccc
gattctaccatgaaccgcctcctgcccggagcagtaggagctgagggtgcccagaagcgg
ggccgccaaactcccttggaattttccaacatgatggctctgatgggagccggccgggtc
cagctaggagccacggggcctctctccttgcaccacgcccacttccaacccgggccagcc
cacggctctcctatctcgtacatgcccttctcgaccgcggccgccaccgcctcctcttcc
tccggtgccctgctccacccggcgctgggccacgctggcttcgctgcaggccacttgcac
ctgggccacccccagcccgtggacgaggacgaggaggaagacgagatggacgacttgtct
cagggctacgccagctcggagcgggacttctccttgctcgacgacgacccgatgatgccg
gccaactctgactccagcgacgaggaaggggaggaggaaggggacgactga
DBGET
integrated database retrieval system
