Gekko japonicus (Schlegel's Japanese gecko): 107118904
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Entry
107118904 CDS
T04299
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107118904 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gja03000
]
107118904 (CNOT4)
03019 Messenger RNA biogenesis [BR:
gja03019
]
107118904 (CNOT4)
04121 Ubiquitin system [BR:
gja04121
]
107118904 (CNOT4)
Enzymes [BR:
gja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107118904 (CNOT4)
Transcription factors [BR:
gja03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
107118904 (CNOT4)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107118904 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107118904 (CNOT4)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107118904 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Torus
DZR_2
Nup35_RRM_2
zf-CCCH_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
107118904
NCBI-ProteinID:
XP_015276782
UniProt:
A0ABM1KSU5
LinkDB
All DBs
Position
Un
AA seq
765 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTNTVDKNKNKVTSLQRYDTPNSNNKDAWPSLQSSSKSVNGLTMEH
RKTPPILENGTDPEHMTPDGPDSDFGPIDKPSDSLSIGNCDNSQQITNSDTPSPPPGLSK
SNPAIPISSSNHSARSPFEGAITESQSLFSDNFRHPNPIPSGLPTFPSSPQTSTDWPMAP
EPQSLFTSETIPVSSSTDWQAAFGFGSSKQQEDDLGFDPFDITRKALADLIEKELSVQDQ
PSLSPTSLQNPSPHTTTAKGSGSGFLHPAAPANANSLSSTFSVLPQRFPQFQQHRAVYNS
FSFPGQAARYPWMAFPRNNIMHLNHTANPPSNSNFLDLNLPPQHSTGLGGIPIADNKSSV
ESLNMKEWQDGLRALLPNININFGGLPNATSPSNANHSVPTSNTATTDSLNWDSPGSWMD
PAIITGIPASAGNSLESLQDDNPPHWLKSLQALTEMDGPSAAPTQTPHNNPFSTQIPLHR
ANWNPYSPPSNPGSFHSPPPGFQTAFRPPSKTPTDLLQSSALDRH
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagcccagatgcgaaggaagaccctgtggaatgccccctttgcatggagcct
ctggagattgatgacataaacttcttcccttgcacctgtggttaccagatctgtcgcttc
tgttggcatcggattcgcactgatgagaatgggctttgtcctgcttgcagaaagccatat
ccagaagatccagcagtgtacaaaccactctctcaagaagagctgcagaggataaaaaat
gaaaagaaacagaagcagaatgaaagaaaacagaagatatcagagaatcgtaaacacctg
gccagcgtacgggttgtacagaagaatcttgtctttgtagtagggttgtcccagcgtcta
gcggatccagaggttttgaaaaggccagaatattttgggaaatttggtaaaatacacaaa
gttgtcatcaacaacagcacatcgtatgcaggctcacagggtccaagtgcaagtgcatat
gtaacctacatccggtcagaagatgcactcagagctatacagtgtgtcaataatgtggtg
gtagatggaagaacacttaaggcatctttaggtaccacaaaatactgcagttattttctg
aagaatatgcagtgtccaaagccagactgtatgtatctacatgaactaggagatgaagca
gctagtttcacaaaagaagagatgcaggctggtaagcatcaagaatatgaacagaagttg
cttcaagaattgtacaagttaaaccccaacttcctccagctgtctacaaacacagttgac
aagaacaagaacaaagttacttcactgcagaggtatgatacacccaacagtaataacaaa
gatgcctggccatcattacagagttcaagtaaatcagtcaacggcttaacaatggaacac
aggaaaacgcctcctattttagaaaatggcacagacccagaacacatgactccagatggt
ccagattcagatttcggccctatcgacaaaccttcagattctctcagtataggaaattgt
gataactcgcaacagataacaaatagtgacacgccttccccacctcctggtttatcaaaa
tccaatccagccatccccatcagttcatccaatcacagtgcacggtctccctttgaagga
gctataacagagtcacagtctctcttctcagacaacttccgacatcccaacccaattcca
agtggactccccacatttcccagctccccgcagacttctactgactggcccatggcacca
gaaccacagagcctcttcacatcagaaaccattccagtatcctcctctacagactggcaa
gcggcatttgggtttggttcttccaaacagcaagaagatgacttggggtttgatcccttt
gatatcacccgcaaagccttagcagacctgatcgagaaggaactgtcggtccaagaccaa
ccctccctctcgcccacgtctctccagaacccttccccacacactacaaccgccaaaggg
tcaggctctggatttctgcatcctgctgcgcccgcaaatgccaactctctcagtagcaca
ttttcagtcttgccacagaggttcccgcagtttcaacagcatcgagcagtttacaactcc
ttcagttttccaggccaagcagctcgctatccatggatggccttcccacgcaataacatc
atgcatttgaaccacacggcaaatcccccttcaaacagtaatttcttggacttgaatctc
ccaccacaacacagcacaggtctaggagggatccctatagcagacaacaagagttctgta
gagagtttaaatatgaaggaatggcaggacgggctaagggcacttctaccgaacattaac
atcaactttggtggactgcccaatgctacttccccctccaacgccaaccacagtgtacca
acgtccaacactgccaccaccgacagcctgaattgggacagccctggcagctggatggac
cccgcaatcatcacaggtatcccagcgtccgccggaaacagtttagagtcccttcaagac
gacaatccaccacactggctaaaatctcttcaagccctcacagagatggatggccccagt
gctgccccaacacagaccccccacaataaccccttcagcacacagattcctctgcacaga
gccaattggaatccctattcccctccttcaaaccccggcagtttccattctcctccccca
ggttttcagacagctttcagaccccccagtaaaacccccacagatctactacagagctca
gcgctggatcgtcattag
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integrated database retrieval system
