KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107119268
Entry
107119268         CDS       T04299                                 
Symbol
PNKP
Name
(RefSeq) polynucleotide kinase 3'-phosphatase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107119268 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gja01009]
    107119268 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gja03400]
    107119268 (PNKP)
Enzymes [BR:gja01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     107119268 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     107119268 (PNKP)
Protein phosphatases and associated proteins [BR:gja01009]
 HAD phosphatases
  Other HAD phosphatases
   107119268 (PNKP)
DNA repair and recombination proteins [BR:gja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     107119268 (PNKP)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase_6 Hydrolase
Other DBs
NCBI-GeneID: 107119268
NCBI-ProteinID: XP_015277223
LinkDB
Position
Un
AA seq 525 aa
MMRCLLISQDQRHDPIHLPDGVMVILGRGPKTLITDKKCSRTQVELLANYAYRSVRVTQR
GVNPTSVEEIHLLNGLYHYCIRFEQDSRSPKKTVREYFSPRRPLKEDDNMVQPPKRPRAS
SPSEDEDDDDPSVVEKLRQLQEMAAQVEQTRQPSPPALPNLPSHPRDSWEDFGKLLVFTK
KGVMPSAKIAGFDLDGTIITTQSGKVFPTGPDDWKILYPEVPRKLKQLLSEGYKVVIFTN
QLGISRGRLRPEVFKAKLEAVVERLGIPVQAFVATGSGIYRKPVFGMWDHLCKKANGDLS
VSLSQSVYVGDAAGRPPNWAPGHKKKDFSCSDRLKEAPFSLPDFDPRALDPKAQLYDPPD
ASLTSSSPELVLAVGFPAAGKSTFVKQHLVPAGYAYANRDTLGSWQKCVAVCQSALQAGK
SAVVDNTNPDLESRRRYIDCAKALGVPCRCFLFTASLEQAKHNNRFREMTEKEHVPVNSI
VLNTYKSNYVEPSLEEGFAEIIKIHFVPQFTNPELESLYRQFSEG
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgatgcggtgtctcctcatcagccaagaccaacgccatgatccaattcatctgcctgat
ggtgtgatggtgattcttggcaggggacctaagactcttatcactgataagaagtgttca
cggacacaagtggagttactggcaaattatgcctacagatctgtaagagtcacccagcgg
ggggtaaaccccacgtcggtggaggagatacacctgctgaacggactgtaccattactgc
atccgctttgagcaagattcccgctccccaaagaaaacggtgcgggagtacttcagcccc
cggcgccccttgaaggaggatgacaacatggtccagccccccaagcggccccgggcctcc
agcccttctgaggacgaagacgacgatgacccttctgtggtggagaaactgaggcaactg
caggagatggccgctcaggtggagcagacgcggcagccttccccgccagccctcccgaat
ctgccttcccatcctcgtgactcctgggaggactttggcaagctcttggtcttcacgaag
aaaggggtgatgccaagtgccaaaattgcaggttttgatttagatggaaccatcatcact
acgcagtccgggaaagtgtttccgacaggccccgatgactggaaaatcctgtaccctgaa
gtcccgcgcaagctgaagcaacttctgagtgaggggtacaaggttgtgattttcaccaat
cagctgggcatcagccggggacgcctcaggcctgaggttttcaaagccaaattggaggct
gtggtcgagcggctgggcatcccggtacaggcctttgtggcgactggctctggcatttac
cgcaagcccgtcttcggcatgtgggaccatttgtgcaaaaaggcaaacggcgacctctca
gtgtctctgagccaaagcgtctacgtgggagatgcagctgggcgtccaccaaactgggcc
cctgggcataagaagaaggatttctcatgcagcgaccgcctgaaagaggctccgttttca
ctccccgactttgatccacgggcgctggaccccaaggcacagctctatgatcccccagat
gcttctctgacctcctcctccccagagctggttttggcagttggctttcctgctgccggc
aaatcaacatttgtgaagcagcacttggtcccggcgggttatgcctatgccaacagggac
acgctcggttcgtggcagaagtgcgtggccgtgtgccagtcggcgctgcaggcgggaaag
agcgcggtagtggacaacaccaatccggacttggagtcgagacgcaggtacattgactgt
gccaaggcgcttggggttccctgccggtgtttcctcttcacagcctccttggagcaagcc
aagcataacaacagattccgggaaatgactgagaaggaacacgtccccgttaacagtatt
gtcttgaacacctataagagtaactatgtagaaccgtcgctcgaggaaggttttgctgaa
atcataaagattcattttgtgcctcagttcacaaacccagaactggagtcactctaccgt
cagttttccgaaggatga

DBGET integrated database retrieval system