Gekko japonicus (Schlegel's Japanese gecko): 107119382
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Entry
107119382 CDS
T04299
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107119382 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gja04131
]
107119382 (SCARF1)
Membrane trafficking [BR:
gja04131
]
Endocytosis
Phagocytosis
Scavenger receptors
107119382 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_C8A_B_C6
EGF_2
Motif
Other DBs
NCBI-GeneID:
107119382
NCBI-ProteinID:
XP_015277331
UniProt:
A0ABM1KUE4
LinkDB
All DBs
Position
Un
AA seq
813 aa
AA seq
DB search
MESLLFLVLFLQVQGPRTGTYASELDPNGKHVCGHTHVLTCCSGWKQEGRECTVAVCEGD
SACQEEEVCVGPGLCRCKPGFFGANCITRCPDEYWAPDCKERCLCYPYGKCDPASGECTC
HPGRWGALCQFACQCGPHGHCNPLTGTCHCKQGWWAPDCKKQCQCNLAGSRCDPATGRCL
CDPGWWGRKCSSPCHCNHSPCAQETGRCECRAGTWGPSCQQQCQCLHGTCSPQDGQCTCD
AGYQGQRCTDPCPAGTFGLQCRYSCGHCKQRQPCSPVDGFCLACDAGWNGTRCNQLCLLG
RYGDNCAELCPRCYQGEACHPQTGECRNCEPGFRGARCDLPCPPGLFGKGCLLVCPSCFN
GSCDPVSGACVCQPGYRGTSCNQTCPDGFYGPNCSEVCHCPGGLCHPSSGACQWRGKRQE
VLLAGILTPLLLLLLLCICCCFCCRSAPMATNDRVAAADGDPVSQVKHHVQGALANLHST
FPCFSLGGYKLPRVTVSHHDAEIPFTPSFLEPPSAAWPMDSSFSDTDEDEAPACHLPTDA
VPDSGAQPGVLPEVSALNLEPFAIPRTSSIAKAKRPSVSFAEGTCFVPQSLRGSAETVHL
AQKPKAAWGFPQVPLLHQGGEKDPPPECCYENVEAGSWTEEGHKPSPRSTPGGPRKRVSG
SRHVAQRVEALEAALSAQGKEPGLTTIYVTVGKGDGRGRGPEQQPGSLPREGPKLGRGTE
GLQVPPKRTSDSDQSTKGQPSQGKPDLESKSPEAQGLLGSLPAPTCEEAGQNQRHGQSHG
QPEAEAGGDASMEESREPKYENVSGLIHLPIAT
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgctgctcttcttggttctcttcttgcaagtccagggcccaaggactgggacg
tatgcctctgagctggaccccaatgggaaacatgtctgcggccacacccacgttctcacc
tgttgctctggctggaagcaagaaggccgagagtgcacagtggccgtttgcgaaggagac
tctgcgtgccaagaagaggaagtatgcgtgggacctggtctttgccgttgcaagcctggc
ttctttggggccaactgtattacacgttgccctgatgaatactgggcccccgactgcaaa
gagcgctgcctttgctatccctacgggaagtgtgatccagccagtggagagtgcacctgt
caccccggccgctggggggcgctgtgccagtttgcctgccagtgtggcccccatggccac
tgcaaccccctcactggaacctgccactgcaagcaaggctggtgggcgccggactgcaag
aagcagtgccagtgcaacctggccggctctcgttgtgacccagcgactggtcgctgcctc
tgcgaccctggatggtggggcaggaagtgctcctctccctgccactgcaaccattcaccc
tgtgcccaggagactggccgatgtgagtgcagggcagggacgtgggggccatcctgccag
cagcagtgccagtgcttgcatgggacctgcagcccccaagacggacagtgcacatgtgat
gccggctaccagggccagaggtgtacggacccctgtcctgctgggacctttgggctgcag
tgcagatacagctgcggccactgcaagcagagacagccttgctctccggtagatggattc
tgcttggcctgtgatgctggctggaatgggacccgctgcaatcaactctgcctcctgggg
cgctatggggataactgtgcagagctctgcccccgctgctaccaaggggaggcttgtcac
ccccaaacgggggaatgccggaactgtgaaccaggcttccgaggcgccaggtgtgacttg
ccctgtccccccggcttgtttgggaaaggctgcctccttgtctgtccaagctgcttcaac
gggagctgtgatccagtgtctggggcgtgtgtgtgccagcccgggtaccggggcactagc
tgcaaccagacctgcccggatgggttttatgggcctaactgctccgaggtctgccattgc
cctgggggcctgtgccacccatcttctggggcctgccagtggagaggcaagaggcaagaa
gtccttctagcgggcatcctgaccccactgctgctgctcctcctgctctgcatctgctgc
tgcttctgctgccgatcagctccaatggccaccaatgacagggtggccgctgcagatggg
gacccagtctcccaggtgaagcaccatgtgcagggggcgctggctaacctccactccacc
ttcccctgcttctctttggggggctacaagcttccacgggtgacagtctcccaccacgat
gcagagatccccttcacccccagcttcctggagcccccttccgctgcctggcccatggac
agctccttctccgacacagatgaggatgaagcaccggcctgccacctccctaccgatgca
gttccagactctggggcacagccgggcgtcctccccgaagtgtcagccttgaacctggaa
ccctttgccatccctcgcacgtccagcattgccaaggccaagcgaccctccgtgtccttt
gccgaaggcacctgcttcgtccctcagagtctccgaggctctgcagaaaccgtccacctc
gcccagaagccaaaggcggcctggggcttcccccaagttcccttgcttcaccagggtggt
gaaaaggaccctccgccagagtgctgttatgagaacgtggaggccggctcgtggacggag
gagggccacaagccctctccgcggagcaccccaggcggccccaggaaacgggtctccggc
tcccggcacgtggcccagcgggtggaagctctggaggcagctctgtctgctcagggcaaa
gagccaggtctcactaccatttatgtgacggtgggcaaaggggacgggaggggcagaggg
ccagagcaacagccggggagcctgccgagggaggggcccaagctcgggcggggcacggag
ggcctccaggtgccccccaagaggacctcagactcagaccaaagtactaaggggcagccc
tcccaaggcaagcctgacctagaatccaagtcccctgaggcccagggccttctgggaagc
ctgccggctcctacctgcgaggaggctggacagaatcagcgtcacggccaaagccacggc
cagccagaggcggaagctggaggagatgcttccatggaggagtcccgggagccgaagtat
gagaacgtctctgggttgattcatctccccatagctacctaa
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