Gekko japonicus (Schlegel's Japanese gecko): 107119436
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Entry
107119436 CDS
T04299
Symbol
PRPF8
Name
(RefSeq) pre-mRNA processing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107119436 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gja03041
]
107119436 (PRPF8)
Spliceosome [BR:
gja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107119436 (PRPF8)
Complex C
U5 SnRNP specific factors
107119436 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
107119436
NCBI-ProteinID:
XP_015277387
UniProt:
A0ABM1KUK0
LinkDB
All DBs
Position
Un
AA seq
2335 aa
AA seq
DB search
MAGVFPFRGPCPPMPAPLTPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFLEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMAENPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgtgttcccgttccgggggccctgccccccaatgcctgctcccttgacccca
ctccctgactatatgtctgaagaaaaacttcaggagaaagcccgcaagtggcagcagctg
caggccaagcgctatgctgagaagcggaagtttggctttgtggatgcccagaaggaagac
atgccccctgagcatgtgaggaagatcatccgtgaccatggtgacatgaccaacagaaaa
ttccggcatgacaagcgggtttatttgggtgctctgaaatacatgcctcatgcagtcctg
aagcttctggagaacatgccgatgccctgggagcagatccgggatgtgcctgtcctgtac
cacatcaccggtgccatctcctttgtgaacgagataccgtgggtgattgagccggtgtac
attgcccagtgggggtccatgtggatcatgatgaggcgagagaagagggaccgccgccac
ttcaagcgcatgcgctttccacccttcgacgatgaggagccgcctcttgactatgctgac
aacattctggatgtggagccccttgaggccatccagctggagctggaccctgaggaggat
gccccagtgctggattggttttatgaccaccagcctctgaaggacaaccgcaagtacgtc
aatggctccacctaccaacgctggcagttcaccctccctatgatgtccacactctaccgc
ctagccaaccagctcctcacagacctagtggatgacaactacttttacctctttgacctg
aaggccttcttcacgtccaaggcactcaacatggccattccagggggacccaagtttgaa
cctttggtccgagacattaacctacaggatgaagactggaatgaattcaatgatatcaac
aaaatcatcatccgccagccaattaggactgagtacaagatcgccttcccctacctgtac
aacaacctcccccaccatgtccacctcacctggtatcacacaccaaatgtggtctttatc
aagactgaggatccagacctgccagcgttctactttgacccgctcatcaaccccatttcg
cacagacactctgttaagagccaagaacctctccccgatgatgatgaagaatttgagctg
ccggaattcttggagcccttcctgaaggacacaccactctacacagacaacacagccaat
ggcattgcgctcttgtgggcacctcggcctttcaacctgcgctctggccgaacccgacgg
gctctcgacatccctctagtcaagaactggtaccgggagcattgccctgctgggcagcct
gtcaaagtccgggtctcctatcagaagctgctgaagtactatgtcctgaatgcgctcaag
catcggccccccaaggctcagaagaagcggtatctcttccgctccttcaaggccaccaag
ttcttccagtcgaccaagctggactgggtggaggtgggcctccaggtctgccgccagggc
tacaacatgctcaacttgttgatccaccgcaagaacctcaactatctccacctggactac
aacttcaacctgaagcctgtcaagactctcaccaccaaggaaaggaagaagtcccggttt
ggcaacgcttttcacctgtgccgagaggtgctgcgcctgaccaagctggtggtggacagc
catgtccagtatcgattagggaacgtggatgctttccagctgtcagatggtctgcagtat
atcttcgcccatgtcgggcagctgacagggatgtacaggtacaagtacaagctgatgagg
cagatccggatgtgcaaggacctgaagcacctcatctactaccgtttcaacacaggacca
gtggggaagggccctggctgtggcttctgggctccaggttggcgtgtgtggctgttcttc
atgcgaggcatcaccccactgctggagcgctggctgggcaaccttctggccaggcagttc
gaaggtcgtcactccaagggtgtagccaagacagtcactaagcaacgcgtggaatcacac
tttgacttggaactgcgtgccgctgtgatgcatgacatcctggacatgatgcccgagggg
atcaagcagaacaaggctcggaccatcctgcagcacctgagcgaagcctggcgctgctgg
aaagccaatatcccttggaaggtgcctgggctgccgactcccatcgagaacatgatcttg
aggtatgtgaaagcgaaagccgactggtggacaaacacggcccactacaaccgggaacgt
atccgccggggggccaccgtggacaagacggtctgcaagaagaacctgggccgcttgact
aggctgtacctgaaggcagagcaggaacggcagcacaactatctgaaggatggcccgtac
atcacagcggaggaggccgtggccgtctacaccaccactgtgcactggctggagagtcgg
cggttttcgcccattcctttccctcccctgtcctacaagcatgacaccaagctactgatt
ctggccttggagcggctgaaggaagcctacagtgtaaagtcccgtctgaatcagtcgcag
cgagaggaactgggcctcattgaacaggcgtacgacaacccccacgaggccttgtcccgc
atcaagcgacacctgctgacacagcgagctttcaaggaggtgggcattgagttcatggac
ctctacagccacctggtcccagtgtatgacgtggagcctctggagaagatcactgatgcc
tacctggaccagtatctgtggtacgaggccgacaagaggcggctctttcctccctggatc
aaaccagctgacacggagccccctccattgctcgtgtacaagtggtgccaaggcatcaac
aacctgcaggatgtgtgggagaccagcgaaggggagtgcaatgtaatgctggagtcgcgc
tttgagaagatgtacgagaaaatcgacttgacgctgctcaacaggctgctgcgcctcatc
gttgaccacaacattgctgactacatgacggccaagaacaacgttgttatcaactacaag
gacatgaaccacaccaactcctacgggatcatccggggcctgcagtttgcctccttcatc
gtccagtactacgggctggtgatggacctgcttgtgcttggcctccaccgggccagtgag
atggccggtcccccgcagatgcccaacgacttcctcagcttccaggatattgccactgaa
gtggcccaccccatccgcctcttctgcagatacatcgaccgcatccatatattcttcaga
ttcacagcggatgaggcaagggacctgatccagcgctacctcacggagcacccagacccc
aacaacgagaacattgtgggctacaacaacaagaagtgctggcccagggatgcccgcatg
cgcctcatgaagcacgacgtcaaccttggccgtgctgtgttttgggacatcaagaaccgg
ctgcctcgctcagtcaccacggtgcagtgggagaacagctttgtgtcggtgtacagcaag
gataaccccaacctgctgttcaacatgtgtggcttcgaatgccggatcctccccaagtgt
cgtaccagttacgaagagttcacccacaaggatggggtgtggaacctgcagaacgaggtg
accaaagagcgcacggctcagtgcttcttaagagtggacgacgaatccatgcagcggttc
cacaacagagtccggcagatccttatggcctccggatccacgaccttcacgaagatcgtg
aacaagtggaacacggcgctgatcggcctgatgacctacttccgggaggctgtggtgaac
acgcaggaactgctggacctgctggtgaagtgcgagaacaaaatccagactcggatcaag
atcggcctgaactccaaaatgcccagtcgcttcccgccggtggtcttctacacaccgaag
gagctgggaggcctgggcatgctgtccatggggcacgttctcatcccccagtctgatctc
aggtggtccaaacagacagacgtgggcatcactcacttccggtcagggatgagccatgag
gaggaccagctgatccccaacttgtaccgctacattcagccatgggagagcgagttcatt
gactcccagcgggtgtgggcggaatacgcgctgaagaggcaggaggccatcgctcagaac
aggcgcctgactctggaggatctggaagactcctgggacaggggcatccctcgcatcaac
accctctttcagaaagaccggcacactcttgcctacgacaagggctggagggtcaggaca
gatttcaaacagtaccaggttctgaagcagaatcctttctggtggactcatcagcgccac
gacgggaagctgtggaacctgaacaactatcgcacagacatgatccaagctctcggcggt
gtggagggtatcctggaacacacactcttcaaagggacctatttcccaacctgggagggt
ctgttctgggaaaaggccagtgggtttgaggagtccatgaagtggaagaagctgaccaat
gcccagcgctctggtctgaaccagatccccaacagaaggttcaccctctggtggtctccc
accatcaacagggccaatgtgtacgtgggcttccaggtgcagcttgacttgacaggcatc
ttcatgcacggcaagattcccaccctgaagatctccctcatccagatcttccgagcccac
ttgtggcagaagatccacgagagcatcgtcatggatctgtgtcaggtctttgaccaggaa
ctggacgccctggagattgagacagtgcaaaaggagacaatccaccccaggaagtcctac
aagatgaactcctcctgtgcagacatactcctctttgcctcgtacaagtggaacgtgtcc
cggccatcgctgctggcagattccaaggacgtgatggacagcaccaccacgcagaagtac
tggatcgacatccagctgcgctggggcgactatgactctcacgacatcgagcgctacgcc
cgggccaagttcctcgactacaccacagacaacatgagcatctacccctcccccaccggc
gttctcattgccatcgatctggcctacaacctgcacagtgcctatgggaactggtttcct
gggagcaagcccctgatccagcaggccatggccaagatcatgaaggccaaccctgccctc
tatgtgctgcgggagcggatccgcaaaggcctccagctttactcttcggagcccacggag
ccctacctgtcctctcagaattacggggagcttttctccaaccaaatcatctggtttgtg
gatgacaccaatgtgtacagagtcaccattcacaagacgttcgaagggaacttgacaaca
aagcccatcaacggggccatctttatcttcaatccccgcacggggcagctcttcctgaag
atcatccatacgtccgtgtgggcagggcagaagcgattgggccagctggccaagtggaag
acagctgaagaggtggcggccttgatccgatccttacccgtggaggagcagccgaaacag
attatcgtaaccaggaagggcatgttggatcctctggaggtgcacttgctggatttcccc
aacattgtgatcaaaggctcagagctgcagctgcccttccaagcctgcctgaaagtggag
aagtttggagacctcatcctgaaggcgacagaaccccagatggttctcttcaacctctat
gatgattggctgaagacgatttcttcctacacggcattctcccgtctgattctcattctt
cgagcactgcatgtgaacaatgaccgggccaaggtcatcttgaagccagacaagaccacc
atcactgagcctcaccacatctggcccaccttgaccgatgaagaatggatcaaggtggag
gtgcagctgaaggatctgatcctggctgactatggcaagaaaaacaatgtaaacgtggct
tctctgacgcagtccgagatccgggacatcatcctgggcatggagatttcggctccttcg
cagcagcggcagcagatcgcagagatcgagaagcagaccaaggagcagtcgcagctgaca
gccacacagacgcggactgtgaacaaacacggcgatgagatcatcacgtccaccaccagc
aactacgagacacagaccttctcctccaagacagagtggcgtgtcagggccatttctgca
gccaatctccacttacggacaaaccacatctatgtctcgtcggatgatatcaaggagacc
ggctacacctacatcctccccaagaacgttctgaaaaagttcatctgcatttcagaccta
cgcgcgcaaattgcagggtacctgtacggagtgagcccccccgataacccccaggtgaaa
gagatccggtgcatcgtgatggtgccccagtggggaactcatcagaccgttcacctccct
ggccagctgccccagcacgagtatctcaaggaaatggagcccctgggatggattcacacc
cagccgaatgagtctcctcagctctcgccacaggatgtcacaactcatgccaaagtcatg
gctgagaatccctcgtgggatggagaaaagaccatcattataacctgcagtttcacccct
ggctcctgcaccttgaccgcctacaagctgacccccagtggctacgagtggggcaggcag
aacacagacaaagggaacaaccccaagggctacctgccctcccattacgagcgggtccag
atgctcctgtccgatcgcttcctgggcttcttcatggtgcccgcccagggctcctggaac
tacaacttcatgggtgtccgtcatgatcctaacatgaaatacgagctgcagttggcgaac
ccgaaggaattctaccacgaggtccatcgcccttcccacttcctcaactttgcccttctc
caggagggcgaggtgtactctgctgatcgagaagacctctatgcctaa
DBGET
integrated database retrieval system
