Gekko japonicus (Schlegel's Japanese gecko): 107119536
Help
Entry
107119536 CDS
T04299
Symbol
HIF1A
Name
(RefSeq) hypoxia inducible factor 1 alpha subunit
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04137
Mitophagy - animal
gja04140
Autophagy - animal
gja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107119536 (HIF1A)
04137 Mitophagy - animal
107119536 (HIF1A)
04148 Efferocytosis
107119536 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gja03000
]
107119536 (HIF1A)
Transcription factors [BR:
gja03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107119536 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
107119536
NCBI-ProteinID:
XP_015277510
LinkDB
All DBs
Position
Un
AA seq
822 aa
AA seq
DB search
MDSDATGGASDKKRISSERRKEKSRDAARCRRSKESQVFYELAHQLPLPHHVSAHLDKAS
IMRLTISYLRMRKLLDADDLEAEAEMETQLNCFYLKALDGFVMVLSEDGDMVYMSENVNK
CMGLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSR
GRTVNIKSATWKVLHCTGHIRIYDSCSSQTVCGYQEPPMTCLVLICEPIPHPSNIEVPLD
SKTFLSRHSLDMKFSYCDERITELMGYDPEELLGRSVYEYYHALDSDHLTKTHHDMFAKG
QVTTGQYRMLAKEGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVEKDLIFSLQQTE
CMLKPVDSPELKETKLLGKDTLEDSNSLFEKLKKEPDALTLLAPAAGDTIIALDFGTDDS
DEQPPDDVPLYNDVMLPSSSEKLQCIHLAMSPPPASDTTKPLRSNVDPALNREVVSKLEP
SVEPLDLTFSACRKQEQPATPSDGSTSQSSPEPSSPGDYCFDVDNEMASEFKLELVEKLF
AIDPDLKNPFSMQLCVSKRTSTNWETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSTAS
TPPNVAVMFQPAPLPSAATDEIKPLSTKLMDDSKMLLEPIQVTIENTSPPASPYVESPSR
TASPVRTGKGLVEQKGKSSPGTPNLLTVTLGKSKSTATNEDLNPKIIALHNIQRKRKMEQ
DGLLFQAVGIGALLAQSGSPGANVSLAWKRVKGCKCNGQNEVAEKTVILLPSDIASKLLG
QSMDEKGLPQLTSYDCEVNAPIQGNRNLLQGEELLKALDQVN
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggactccgacgcgacgggcggcgccagcgacaagaaaaggattagttcagaacgcaga
aaggagaagtccagagacgcagccagatgtcggaggagcaaggaatcgcaggtcttctac
gaactcgctcaccagttgcccctcccccatcacgtgagtgcgcatctcgacaaagcctct
attatgaggctaaccatcagctacctgcgcatgaggaagctgctcgatgcagatgacctg
gaggcagaagccgaaatggagacgcagctgaattgcttctacctaaaagctctcgacggg
tttgtcatggtgctctccgaggacggcgacatggtctatatgtctgaaaacgtgaacaag
tgtatgggactcacgcagtttgagctgaccggacacagtgtgtttgatttcactcatcca
tgcgaccatgaagagctgagagaaatgctcacccaccggaacggccccgtgaaaaaggga
aaggagcagaacaccgagcgtagctttttcctccgcatgaagtgtacgttgaccagcaga
ggacggacagtgaacatcaagtctgccacatggaaggtacttcattgcacagggcacatc
cgcatctacgacagctgcagcagccagaccgtctgtgggtaccaagaacctcccatgaca
tgcttggtgttgatctgcgaacctatccctcacccgtcgaacatcgaagtccccctggac
agcaagacattcctcagccgccacagcctcgacatgaagttttcgtactgcgacgaaagg
attacagagctgatgggctacgatcccgaagagctcctgggccgctccgtctacgaatac
taccacgccctggactccgaccatttgaccaaaacgcatcatgacatgttcgccaaaggg
caagtgaccaccgggcagtacagaatgctcgctaaggaagggggctacgtctgggtggag
acgcaggcgacggttatatacaacactaagaattcccagccgcagtgtatcgtgtgcgtg
aactacgtcttgagtggcatcgtcgagaaggacttgatattctcgctccagcaaacggag
tgtatgttgaaaccggtggattctccggagctgaaggagaccaaactgctgggcaaggat
accctggaagacagcaacagcctctttgagaaactgaagaaggagccagacgcattaacc
ttgcttgctcctgccgcgggggacaccattattgcgctagatttcggcactgacgactct
gatgagcagccgcctgacgatgttcctttgtataatgatgtaatgctcccctcatccagt
gagaaattgcagtgcatacatttggccatgtcccccccgcccgcttcagacaccaccaag
ccgctgcggagcaatgtggatccggcgctcaatcgggaggtggtgtccaagctggagcct
agcgtggagcccctggatctgaccttctcagcctgccggaagcaagagcagccggccacc
ccttccgacggcagcaccagccaaagctcgcctgagcccagcagccccggcgactactgc
ttcgacgtggacaacgaaatggccagtgagttcaagctggagctggtggagaaactcttc
gccatcgacccagacctgaagaacccgttctccatgcagctctgtgtttccaagaggacc
tccacaaactgggaaacggatttagatttggagatgttagcgccctacatccccatggac
gacgacttccagttacgttccttcgaccagctttctccgctggagagcagtacggcgagc
acgcctcccaacgtggccgtcatgttccagccggctccgctgccgtccgctgccacggat
gagataaagcccttgtccaccaaacttatggatgactctaagatgctcctagagcccatt
caagtcaccatagaaaacaccagccccccagcctcgccgtatgtggagagtccgagccgg
acagcgtcgccggtcagaacgggaaaaggcctggtggagcagaaagggaaatcgagtccg
gggacacccaatttgttaacagtcacgttgggcaaaagtaaatcaactgcaacgaacgaa
gacctcaatccaaagatcatagctctgcataacattcagaggaaacggaagatggagcag
gacggtttgcttttccaagcagtgggaattggtgctttgctggcgcagtcgggtagtccc
ggagcaaacgtgtcactagcctggaaacgtgttaaagggtgcaagtgtaacgggcagaat
gaggtggcggagaagacggtcattttgctgccgtcagatatagccagcaagctcctagga
cagtcgatggacgagaaggggctcccgcagctgacgagctacgactgtgaagtgaacgct
cccatccaaggcaaccgaaacctgctgcagggtgaagagctgctgaaagccctggatcaa
gtcaactga
DBGET
integrated database retrieval system
