Gekko japonicus (Schlegel's Japanese gecko): 107119568
Help
Entry
107119568 CDS
T04299
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107119568
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
107119568
3'-5' decay
Other 3'-5' decay factors
107119568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
zf-CCCH
AAA_19
UvrD-helicase
AAA_30
AAA_12
ResIII
PhoH
zf_CCCH_4
Mov-10_helical
AAA_22
zf-CCCH_4
AAA_7
AAA_14
AAA_16
Bac_DnaA
Zn_finger_prot
MOV-10_Ig-like
AAA_5
Mg_chelatase
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
107119568
NCBI-ProteinID:
XP_015277563
LinkDB
All DBs
Position
Un
AA seq
924 aa
AA seq
DB search
MADRRPEKSCEQACESLRQQDYEVAVKHCTEALFSLSQYPPTCFPEACQAEINRIKIESL
LYRIASSLQLKNYGKADEDCRHVLGEGLAKEDHTFRAVLCCMHLKGKLQIVSNALSKSLT
GESLNGMVTKDLTRLKTLLVETEAAAGKVPSVYHVEDLEEGSQDGWQFRPPPRGVTSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYACRLIRLKQQKENEQCLGSYMESLI
EKWMNSLSPEKVLSECLDGVRVEHNPELSVTVTTKKSQQTWTFALTCKPARMLYRVALLY
DAHRPHFSITTISSGDSTTQVSQDVPDNCQEWIGRKMTQNGIDHSVYKISIAFSTEIFGT
FRQTVVFDFGTEPVLMQRVMIDAASTEDLEYLMNARQQLLTTAKRWDSTSKTIVEFEPNE
TTELEKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEVSKFNI
KVQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVT
KEKSVLTQGTKEKVYEAAIEEKTKEYIFLRISRECCEELNLQSDCEMQVELQFQLNRLPL
CEMHYALDRIKDNSILFPDVSMIPTIPWSPTRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatcactcagacagcag
gattatgaagtggccgtgaagcactgcacggaggctctcttttccctcagccagtatcct
cccacttgcttcccggaagcatgtcaggctgaaatcaaccgcatcaaaattgaaagtctt
ctctatagaattgcttcctctttgcaactcaaaaactatggaaaagctgatgaagactgt
aggcatgtattgggagagggactggccaaggaagatcacactttccgtgcagtgctttgc
tgcatgcatcttaaagggaagctacagattgtatctaatgctctttctaaatcactgacg
ggcgaatcactgaatggaatggtaactaaagatctgacaaggctgaaaacacttctggtt
gaaacggaggcggcagctggtaaagtaccctctgtatatcatgtagaagatttggaagaa
ggatctcaggatggctggcaatttcggcccccaccaaggggagttacaagtagtgaggag
tacacattatgcaaaagatttttagagcaagggatctgccggtatggtgcacagtgtacc
tcagcacattcccaggaagagctaacagaatggcagaaacgatatgcttgccggttgata
agattaaaacagcaaaaggaaaatgaacagtgtttgggaagttacatggaatccttgatt
gaaaaatggatgaattcgttatctcccgagaaagtgcttagtgaatgccttgatggagta
agagttgaacataatcctgaactgtcagttactgtcaccaccaaaaaatcacaacagaca
tggacatttgctctcacgtgtaagcctgcaagaatgttgtatcgagtggcactgctctat
gatgcccatcgtcctcatttcagtatcacgacaatatcttctggagatagcaccacccag
gtatcacaagatgtcccagacaactgccaggaatggatcggacgaaagatgacccagaat
ggaatagatcattctgtgtacaaaatcagtatagcctttagcacagaaatctttggaaca
tttcggcaaactgtagtatttgattttgggactgaacctgttttgatgcaacgagtgatg
attgatgctgcttcaacagaagatcttgaatacctgatgaatgcacggcaacaactatta
actacagccaagcgttgggattccacttctaaaactattgtagagtttgagccaaatgag
actactgaattggaaaagagccttctgatcagataccaaattcctctgtctgctgaccag
ctatttacacagtctgtcttggataaatcactgaccaagagtaactatcagtcacgattg
cacgacctcctttatattgaggaaatagcgcaatataaagaagtcagcaagttcaatatt
aaagtgcaattgcagattgtagcaagcttcatgctcaccggtgtttctggaggtgcaaag
tatgcccaaaatggacaactttttggacgctttaaactcactgaaacgctttctgaagat
actttggcaggacgactggtgatgaccaaagtcaatgctgtttatttattgccagtcact
aaagagaaatcagtactgacccaaggaaccaaagagaaggtgtatgaagcagcaatagag
gaaaaaacaaaggagtatatctttttgagaatatccagggaatgctgcgaagaacttaat
cttcaatcagattgtgaaatgcaggtcgaacttcaatttcagttaaaccgcttaccactc
tgtgaaatgcattacgctttggacaggatcaaggacaacagtattctctttccagatgtc
agcatgattcccacaataccttggagtcccaccagacagtgggatgagcagttggatcct
aggctcaatgcaaagcagaaggaggctgttctggcaatcacaactccactctcaatacag
ttgcctcctgttcttatcatcggtccctatgggacaggcaaaaccttcactttggctcag
gcagtcaagcatatacttcaacagcaggacactagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcgagacctctcagggtgtatttcagaaatcgctgggtaaagactgtccaccca
gttgtgcatcaatactgtttgatttcaagcacacattccacctttcagatgccccagaag
gaagacattcttaagcaacgagtagtagttgttacattgaatacttcacaatatctatgt
caactggatcttgaacctgggttttttacacatattctgttagatgaagctgcacaggcc
atggagtgcgagactatcatgcctctagcattagcaaacaaaaatacaagaattgtcttg
gctggagatcatatgcaactcagtccttttgtctacagtgaatttgcaagagagagaaat
cttcatgtgtcactacttgatcgtctctatgaacactatcctgcagaatttccatgcagg
atcttgctgtgtgaaaactatcgctcccatgaagctatcatcaattatacatctgaactt
ttctatgagggcaaattgatggcaagtgggaaacagccagcacacaaagatttctaccct
ctgactttcttcacagcacgaggagaagatgtgcaagaaaaaaacagcacagctttttac
aacaatgcagag
DBGET
integrated database retrieval system
