Gekko japonicus (Schlegel's Japanese gecko): 107119716
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Entry
107119716 CDS
T04299
Symbol
CHD9
Name
(RefSeq) chromodomain helicase DNA binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gja03036
]
107119716 (CHD9)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107119716 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
107119716
NCBI-ProteinID:
XP_015277778
LinkDB
All DBs
Position
Un
AA seq
2825 aa
AA seq
DB search
MTDPMMDFFDDANLFSDTLEGLSDDAFVQTGPVSLVDELNLGAEFEPLHIDSLNHVQETQ
TEQKMNDFERLNQYDSLKLQVSQSFSSPAENVLSPHSQFNCSPIHPQSQTNGMFPDVADG
SPMWGHQTSTSVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQAGEQHHPCASLQSQQN
RNSVDTGEDTQSQSDNFMEVNTCIPHRTSAPHPPQAANLSNSQQSISIQSFSQSANDSPH
YCDSQEGSFGGHSPSITPCSVNSTQFSPPYSYSSNRISPTGLLQSSTALSASQQTHPLSD
FAPQTGTKHENTENILNSSPSLNSNNFHVLHSTHPQGNFSSSKLSAVNINFSVPAGSGPQ
MSHFSDGIEGNGFSSLDENLLRQVESQAESFTELDPESLLQEDLLPQFDESAFVQDSSSN
ELEHDLEHVTPQVTQLHIVTRHLHVARTQLQNCNHPWNNSGSSQHPQERDRINVQGQPPS
SKKTDGSGTYPKLSNTQVKAMSERKQKKKVESESKQEKANRIISEAIAKAKERGERNIPR
VMSPENFPSVSAEGREEKKGRKIKSKPKDKESKKPKTGSSSKTKERAKISKLIITLGKKQ
KRKNESSDEMSDAKQASQQPFKDEASQENPSEEDAAIVDKILSSRIIKKEIPGGVTVEAE
EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYIE
VDRVLEVSFCEDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQALRPDS
RRLDRPPPNSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQ
SITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQYEMY
FRDSQGRVIRGTYKFQAIITTFEMILGGCAELNAVEWRCVIIDEAHRLKNKNCKLLEGLK
LMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAIL
KPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLV
NTMMELRKCSTSEVLTYSPTASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV
RCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT
AADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDK
AVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTK
TITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDLDAISGRNSLVIDTP
RIRKQTRPFSATKDELAELSDIESEGDDKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWG
RWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTREL
QNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKVL
LRVRMLYYLKQEVIGNECQKVFEGVEASEIDVWVPEPDHSEVPADWWDTEADKSLLIGVF
KHGYEKYNTIRADAALCFLARVGKPDDKAVAAEQRANDYIDGDVEDPEYKPAPAMFKDDI
EDDVSSPGDLIIADGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQMQQIQPVF
PVQACVIQTPYEEASLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDRGQFDWTK
FRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDESMDPNIFIQPITEERASRTLYRI
ELLRKVREQAVRHPQVFERLKLCQPNPDLPIWWECGTHDWDLLVGAAKHGVSRTDYHILR
DPELSFMSAQRSYSQNKAALSRTPTPILHPYQMALSASPLTPQARLLDAKGSTLEDAKVK
NENHKEEPHSSGDESMSTDDVQTGIKTEPLSPKNGTPSHSADHRSVVKADNDRRMVAART
EPLTPNAASKKQRASKRESDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSRSRSSSSSSS
SCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKREGALHLKAYDEESVASLSTVQDE
TQDSFQMNNGTPNSNCLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARRSYDT
NTVASFYTTKLLDSPGAAADYIEPSVPTPPSADVKEENDQSPQMSKVKKHVREKEFTVKI
NDEGGLKLIFQKQGLSQKRPFESEEGTLGQQQYLARLHELQNASEMSLANFPKSLPESGT
SSQLTTSANGVIADDQPAVKKRRGRRKNVEGVDILFINRNKTPNHVCHGISAPQVAPGIN
PALPYAQSQGLCDAESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDLGAFIPK
IQLHEGRPKQKRHRCRNPNKLDINSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKE
NPEYGVAPEWADVVKQSGFLPESMFDRILTGPVVREEVSRRGRRPKSEIAKATAAAAASA
TAANVPVNPLLANGLIPGVDLSTLQALQQNLQNFQSLQVTAGLMGMPAGLNTTGEAKNMA
AMFPMVLSGMAGLPNLLGMGGLLAKSTESVPEEKKGNDSREPEGRKERTESQNAHNGGEN
SLSGSPSTSSTAAAAASPLALNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDVQNNEN
NGTGVAKSTAKEENSSVEGQDGKRGTELSSRNENSTDEGSEKADASSGSDSTSSSSEDSD
SSDED
NT seq
8478 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccgatgatggacttttttgatgatgccaacctcttcagtgataccttagaa
ggtttgtcagatgatgcctttgtacaaactggacctgtttcacttgtagatgagttgaac
ttgggtgcagaatttgagcctttacacattgactcgttaaaccatgtgcaggaaacacag
actgaacaaaagatgaatgattttgaacggcttaatcagtatgattcactgaagcttcaa
gtcagtcagtccttcagcagtccagctgaaaatgttttatcaccacactcgcaatttaat
tgctcacccattcatccccaaagccaaacaaatgggatgtttccagatgtggcagatgga
agccctatgtgggggcatcagacttccaccagtgtttctaatcagaatggatcccccttt
caccaaggacattcacagtctatgcagcaaaataaaagttttgtagcacaccacgatttt
gccttatttcaggccggcgagcagcaccatccgtgtgcctcactgcagtcacagcaaaac
agaaacagcgttgatacaggagaggacactcagagtcagtcagacaacttcatggaagtt
aatacatgtattccacatagaaccagtgctccccacccacctcaagctgctaatctgtca
aattctcaacagtctatttccattcaatcattttctcagtctgcaaatgactcgccacac
tattgtgatagtcaagaaggaagctttggtggacattctccaagtataactccctgctct
gttaatagtacacagttttctcctccttattcctactctagtaaccgcatctctcctacc
ggtcttctgcagtcttctacagctctttctgccagtcaacagactcatcctttatctgat
tttgcacctcagacagggaccaagcatgaaaatacagaaaacatcctaaactccagtcca
tctttgaattcaaataatttccatgtgttgcattcaacacatcctcagggcaacttcagt
agttcaaaactttctgcagtgaacattaatttttctgtccctgctggctctggtcctcag
atgagccatttcagtgatggtatagaaggtaatggtttttcatctttggatgagaacttg
cttcgtcaagttgagtctcaagctgaatcctttacagagcttgatccagaatctctcctt
caagaagatcttcttccacagtttgatgaatcagcttttgttcaggatagctcaagtaac
gagctagaacatgacctggaacatgttactccacaagtgacacagttgcacatagtaacg
agacatttgcacgttgctcggacacagttgcaaaattgcaaccatccctggaataattct
ggttctagtcagcatccacaggagcgagatcgtataaatgttcaagggcagcctccttcc
agcaagaaaacagatggttctgggacatatcctaagttgtcgaatacccaggtgaaggca
atgtctgaaaggaaacagaaaaaaaaagtggaatctgaaagcaagcaggagaaagccaac
cgaataatatcagaggcaatagcaaaagcaaaagagagaggggagagaaacattccacga
gtaatgagtccagaaaacttcccaagtgtttcagcagaaggaagagaagaaaaaaaaggt
agaaaaatcaaatcaaaaccaaaagataaagaaagcaaaaaacccaaaactggctcttca
tctaaaactaaagagagagcaaaaattagcaagcttattattactctgggtaaaaagcag
aagagaaaaaatgagtcttcagatgaaatgtctgatgctaagcaggcttctcagcagcca
ttcaaagatgaagcttctcaggaaaatccaagtgaagaagatgcagcaattgtagataaa
attttatcttccagaatcataaagaaagaaattcctgggggagtgacagtggaagcagag
gaattttttgttaaatacaaaaactactcctacctccattgtgaatgggccacagaacaa
caacttttaaaggataaaagaatccagcagaaaatcaaacgtttcaagctgcggcaagca
cagagagcccatttttttgcagatatggaggaagaacttttcaatccagattatattgaa
gtagatcgggtgttagaagtctccttttgtgaagataaggacactggagagcctgttact
tactacttagtaaaatggtgctcattgccgtacgaagatagcacatgggagctgaaagaa
gatgtagatcaaggaaaaatagaagagtttgaacaactgcaggctttaagaccggattca
aggcggctggatcgacctcctcctaattcatggaagaaaatagaacagtccagggaatat
aaaaatggcaaccaactcagggaataccaattggaaggactcaactggctccttttcaac
tggtacaatcgacaaaactgcatcttagctgatgaaatgggtcttggcaaaaccatccaa
tcaatcactttcctctatgaaatcctcctgactggcataagagggcctttcctgatcata
gctccactttccaccatagccaactgggaaagagagttccgcacgtggactgatcttaat
gttgtggtatatcatggaagtatgatcagtaggcagatgatacagcagtatgagatgtac
ttcagggactcgcagggtcgcgtcattagaggtacatacaagttccaagccattatcact
acctttgagatgattcttggtggctgtgcagaactcaatgccgttgaatggcgctgtgtt
attattgatgaagcacacagactgaagaataaaaactgtaaactgctggaaggactcaaa
cttatgaatcttgagcacaaggtgctgttgacaggcacaccactgcagaatacagtagaa
gaacttttcagcctccttcacttccttgaacctttacgttttccagcagaatctactttc
atgcaggaatttggggatcttaaaacagaggagcaggtgcaaaaactgcaggctatcttg
aaaccaatgatgctgagaaggctaaaagaagacgtggagaagaagctggctcccaaggaa
gaaaccattattgaagttgagctcacaaatatccagaaaaagtattatcgagctatttta
gagaagaactttgcatttttgtcaaaaggtgcaggccaagctaatgtgcccaacttagtt
aatactatgatggaactcaggaagtgtagtacctccgaggtactaacgtacagcccaact
gcttctgatttccacctacaagcaatgatccagtctgctgggaaattggttctcatagac
aaacttcttccaaaaatgaaagcaggaggccataaagtgcttatcttctctcagatggtc
cgctgtcttgatattcttgaagactaccttatacataaaaggtacctgtatgagcgaatt
gatggaagagtaagggggaacttgcgtcaggctgcaattgatcgttttagcaaaccagac
tctgatcggtttgtgttccttctttgtacgagagctggtggactgggcattaatctgact
gcagctgatacgtgcataatttttgattctgattggaatcctcagaatgatttgcaggcc
caagcccgttgccataggattggtcaaaacaaagctgtgaaagtctacaggttgataact
cggaactcttatgagagagagatgtttgacagagcaagtctgaagctgggcctggacaag
gctgtcttgcaaagcatgagtggaagagaaaatagtgttggtggtatacagcaactctca
aagaaagaaattgaagacttgcttcgaagaggtgcttatggtgccattatggacgaggaa
gacgagggctctaaattctgcgaggaggatattgatcaaatcttgcaacgtcgcacaaaa
actatcacaattgaatctgaagggaggggctcaacatttgccaaggctagttttgttgca
tctggaaataggacagatatttcattagacgatcccaatttttggcagaagtgggccaaa
aaagcagaaatagacctggatgccatcagtggcagaaatagcctggtcattgacactccc
agaattaggaaacaaacaaggccatttagtgccacgaaagatgagcttgctgaattatct
gacattgagagtgagggggatgataaaccaaaactgcggagaccttgtgatcgctccaat
ggatatggaagaacagaatgcttcagggtggagaaaaacttgctagtctatgggtggggt
cgttggagagagattctgtcacatggacgtttcaaaaggcagctaaatgaacaagatgtg
gagataatttgccgagccctcttagcttattgccttgttcactacagaggagatgaaaag
ataaaaagttttatatgggacctcattacaccaactgaggacgggcagactcgggagctg
cagaatcaccttggtttgtcagcccctgtccccaggggtcgaaaaggaaagaaagttaag
actcaggccagcactttcgatatacataaagcagaatggcttcgaaagtataatccggag
catctattgcaagatgaagggtataaaaagcacataaagcatcactgcaacaaggtctta
cttcgagttaggatgctgtattatttgaaacaggaagtcattggtaatgagtgccaaaag
gtttttgaaggagttgaagccagtgaaatcgatgtctgggtccccgagccagaccattcc
gaggtgcccgcagactggtgggatactgaggcagataaatctctcctcataggagttttt
aagcatggttatgaaaagtacaatacaattagagcagatgctgctctttgcttcctggca
agagtggggaaacccgatgacaaggcagttgctgctgagcaaagagcaaatgattacatt
gatggagatgtagaagatccagaatataaaccagcaccagctatgtttaaagatgacata
gaggatgatgtgtcatcaccgggggacctcataatagcagatggagatggccagatgatt
gaaggggataagctttactggccaacacagtctgccttaacaacacgtttgcgtcgctta
ataacagcctatcagcgcaccagtaagaacagacaaatgcaacaaatccaacctgtgttt
ccagttcaggcttgtgtgattcagactccgtatgaagaagcttctctaaatccaaaaatg
gctgccaaaattgaaagacagcaaagatggacacgaagggaagaagctgacttctacaga
gtggtttccacgtttggtgttgtgtttgatcctgataggggtcagtttgattggaccaag
tttagagccatggctcggctgcataagaaaacggatgagagtttagagaagtacttgtac
gctttcatggccatgtgcagaagagtctgtcgcctgccttcaaaagatgaatccatggat
ccaaatattttcatccaaccaattactgaagaacgtgcatctcgaactttgtatcgaatt
gaacttctcaggaaggtacgggagcaagctgtccgtcatccacaagtatttgagcgctta
aaactttgccagccaaatccagacctaccaatctggtgggagtgtgggactcacgactgg
gatttactggttggagctgcaaagcacggggttagcagaacagactaccacatccttcgg
gaccctgaactttcatttatgtcagcccaaaggagctacagtcaaaacaaagcagcactt
tcaagaactcccaccccaatcttgcatccgtatcagatggcattgtccgcctcacccctc
acccctcaggcaaggctgctagatgctaaaggaagcacactcgaggatgcaaaagttaag
aatgaaaaccataaagaagagcctcattcttcaggagacgagtccatgtctaccgatgat
gtgcagacaggaataaagactgagcctttgagtccaaagaatggcacaccatcacattct
gcagaccacagatctgttgtgaaagcagacaacgacaggcgcatggttgcagcaaggaca
gagcccctaactccaaatgctgcttccaaaaaacagagggctagcaagagagagtcggac
tccagctccgattcagactctgattcagaccgatcatcctgttcttccagatcgtcttca
tcctcgtcatcttcttcctcttcttgttcacgctccagatctagctcttcatcctcttca
tcttgttcttcagcatcatcgtcgtcatcttcctcttcttcgtcatcctcttcatcttcc
tcctcttcatctgaagagagtgacagtgatgaagaggaggcacaaaagagagaaggagct
cttcacttgaaagcatatgatgaagagagtgtagcttccttgagcactgtgcaggatgaa
acgcaggacagttttcaaatgaataatggaacaccaaattctaattgtctcttacaaggt
ggatatatgttggctgcttcctactggccaaaggatcgagttatgatcaatcgtctcgac
agtatttgtcaaacagtcttgaaaggcaaatggccgtcggcaagaagaagttatgacacc
aacaccgtggcttctttttataccaccaaacttctagacagcccaggggccgctgcagac
tacattgagcccagtgtaccaactcccccaagcgcagatgttaaagaagaaaatgatcaa
tcaccacagatgtcaaaggtgaagaagcatgtacgggaaaaggagtttacagtgaaaatc
aatgacgaaggtggtttgaaattaatttttcagaagcagggactttctcagaaaaggcca
tttgaaagtgaagaaggcacattaggacagcagcaataccttgcccgactgcatgaacta
cagaatgcttcagagatgagccttgctaatttcccaaagtctttgccagaatcgggaaca
tccagtcagttgacaactagtgcaaatggagttatagctgatgaccagcctgcggtgaaa
aagaggcggggaaggagaaagaatgtggaaggagttgatatcctgtttatcaacagaaat
aaaacgcctaaccatgtttgtcatggcatcagtgcccctcaggttgctccaggcataaac
ccagctcttccgtatgcacagtcccaaggcttgtgtgatgcagaaagcccagttccagtt
attaacctgaaagatggaacaaggcttgcaggtgacgatgcccccaaaaggaaagattta
gagaaatggcttaaagaacatcctggctatgttgaagatttaggagcttttattcctaaa
attcagcttcacgaggggagacccaaacaaaaaaggcaccgttgccgaaatcctaataaa
ctggatattaatagccttactggagaagaacgtgttcagcttatcaataggaggaatgct
aggaaggtaggaggtgcttttgctcctccactgaaagacttgtgcagattcctgaaagag
aaccctgaatatggagtagctcctgaatgggcagatgttgtgaaacaatctggatttctt
cccgaaagcatgtttgaccgcattttaacggggcctgttgtacgagaagaagtgagcagg
agaggaaggaggcctaaaagtgagattgccaaggcaaccgcagccgctgccgcctccgca
acagcagccaatgttccggtcaaccctctgctagccaatgggctaatcccaggagtggat
ctgtctacccttcaggccttacagcaaaacctgcaaaactttcagtcactgcaagttaca
gcaggtttaatgggaatgcctgctggcctgaacactactggggaagctaagaacatggcc
gccatgtttcccatggtgctttcaggaatggctggcttaccgaatttgctaggaatgggc
ggactcctagcgaagtctacggaatctgttcctgaagagaaaaagggaaacgattccaga
gagcccgaaggaaggaaagagaggacagagagccaaaacgcacataacggtggagaaaac
tctttgtcgggttctccttccacatcttctactgctgcggcagctgccagccccttagct
cttaaccccttactgttgtccaatatactttatccagggatgcttctcactccaggcctt
aatctccatatcccagctttgtcccagtctaatatttttgatgtacagaacaatgaaaac
aacggcacaggtgtagctaagtcaacagcaaaggaggagaactctagcgttgaaggtcaa
gacggaaaaaggggaacagagcttagctctcgcaatgaaaacagcacagatgagggttca
gagaaagcagatgcttcctctggatcagacagtacatcctcctcgtctgaggattcagac
tctagtgatgaagactga
DBGET
integrated database retrieval system
