Gekko japonicus (Schlegel's Japanese gecko): 107119815
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Entry
107119815 CDS
T04299
Symbol
POLR2A
Name
(RefSeq) RNA polymerase II subunit A
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03020
RNA polymerase
gja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107119815 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
107119815 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gja03021
]
107119815 (POLR2A)
03400 DNA repair and recombination proteins [BR:
gja03400
]
107119815 (POLR2A)
Enzymes [BR:
gja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107119815 (POLR2A)
Transcription machinery [BR:
gja03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107119815 (POLR2A)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107119815 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
107119815
NCBI-ProteinID:
XP_015277892
LinkDB
All DBs
Position
Un
AA seq
1069 aa
AA seq
DB search
MDAHRLRKKPASSFLFLRFKFDYTNERALRRTLQEEMVKDILSNAHIQNELEREFEKMRE
DREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINTRLPSDLHPIKVVDGVKELSKKLV
IVNGDDPLSKQAQENATLLFNIHLRSTLCSRRMIEEFRLSGEAFDWLLGEIESKFNQAIA
HPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTV
FLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNVYYEMPD
FDVTRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRI
MNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKII
ITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERE
LYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLME
AAVHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGVGGPTGM
FFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGY
SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS
YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTS
PSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYS
PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP
KYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEDN
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccacaggctgaggaagaaacccgcctcatccttcctgttcctcaggttcaaa
ttcgactacaccaacgagcgggccctgcggcgcaccctgcaggaggagatggtgaaggac
atcctcagcaacgcacacatccagaacgagctggagagggagtttgagaagatgagggag
gaccgggaggtgctgagggtcatcttccccaccggagacagcaaggtggttctcccctgc
aacttgctgcgcatgatctggaacgcccagaaaatcttccacatcaacacacggctgccc
tccgacctgcaccccatcaaagtggtggacggtgtgaaggaactgagcaagaagctggtg
atcgtgaacggggacgacccgctcagcaagcaggcgcaggagaacgccacgctgctcttc
aacatccacctgcgctccacgctctgcagccggcgcatgatcgaggagttccgcctcagc
ggggaggcctttgactggctgctgggggagatcgagtccaagttcaaccaggccatcgct
cacccaggcgagatggtgggggcgctggctgcccagtccctgggagagcccgccactcag
atgaccctgaacaccttccattacgccggtgtctcggccaagaacgtgacgctcggtgtg
ccccgtctcaaggagttgatcaacatctccaagaagcccaagactccctcgctgaccgtc
ttcctcctggggcagtcggcccgtgatgccgagagggccaaggatatcctttgccgcctc
gagcacacaaccctccgcaaagtgacggccaacacggccatctactatgaccccaacccg
cagaacacagtggtggccgaggaccaggagtgggtgaacgtttactacgagatgcccgac
ttcgacgtcacccgcatctctccctggctgctgcgggtggagctcgaccgcaagcacatg
acggaccgcaagctcaccatggagcagatcgcggagaagatcaatgccggcttcggggat
gatctcaactgcatcttcaatgacgacaacgccgagaagttggtgttgcggattcgcatc
atgaacagcgacgagaacaagatgcaagaggaggaagaggtggtggacaagatggacgac
gacgttttccttcgttgtatcgagtccaacatgctgacagacatgacccttcaaggcatt
gagcagatcagcaaggtgtacatgcacctgccccagacggataacaagaagaaaatcatc
atcaccgaggatggggagttcaaggcattgcaggagtggatcctagagacggacggcgtg
agcctcatgcgggtgctgagcgagaaggatgtggaccccgtgcgcaccacttccaacgac
atcgtggagatcttcacggtcctgggcatcgaggccgtgaggaaggccctggagagggag
ctgtaccacgtcatctcctttgacggctcctacgtcaactaccgccacttggccctgctc
tgcgacaccatgacgtgccgcgggcatctaatggccatcactcgccacggcgtcaaccgc
caggacacaggtccgctcatgaagtgttcctttgaggagacggtggacgtgttgatggaa
gctgccgtgcacggcgagagcgaccccatgaagggggtgtcggagaacatcatgctgggc
cagcttgccccggccggcaccggctgcttcgaccttctcttggacgccgagaagtgcaaa
tacggcatggagatccccaccaacatcccgggcctgggagtgggcgggcccaccggcatg
ttcttcgggtctgctcccagccccatgggtggaatgtcacctgccatgactccgtggaac
caaggtgccacgccggcgtatggagcttggtcccctagtgtcggtagtggaatgactccc
ggcgctgccggcttctctcccagcgccgcttcagacgccagtggcttcagtccgggctat
tctccggcctggtctcccacccctggctctcccggctctcccgggccttccagtccatat
atcccttcgccaggtggagccatgtctcccagctactccccaacgtctcctgcttatgaa
cccaggtcccccggagggtacacaccacagagccccagctacagccccacgtctccttcg
tacagcccaacgtctccctcgtattctcccaccagcccaaattacagcccaaccagccca
agctacagcccgacatcgcctagttactctcccaccagccccagctacagcccgacgtca
cctagctacagtcccactagccccagctacagcccgacgtcacctagttattctcccacc
agccccagctacagtccgacatcacccagctacagccccaccagccccagttacagcccg
acgtcacccagctacagcccaaccagccctagctacagcccgacatcgcccagctacagc
cccaccagccctagctacagcccgacgtcacccagttacagcccgacgtcacccagctac
agccccaccagccccaactatagcccgacatctccaaattacaccccgacctctcctagc
tacagcccaacgtctcccagctacagcccaacgtctccaaattacacacccacttctcca
aactacagccctacttcccctagctattcccctacaagcccctcctacagccccacctcg
cccagctattctccttccagcccccgctacaccccgcagtcaccaacttacaccccctca
tcgcctagctacagccccagctcccccagctacagcccgaccagccccaagtacacccca
accagcccatcgtacagccccagctccccggaatacaccccgacgtcgcccaagtacagc
ccaaccagccccaagtacagcccgacctctccaaagtacagcccaacttcgcccacgtac
agccccaccacgcccaagtacagccccaccagcccaacctactcgccgacatcgcccgtc
tacacgccgacctccccgaagtacagccccacaagccccacttactccccaacgtccccc
aagtacagcccgacctcgcccacctactctccgacgtcccccaagggctccacgtactcc
ccaacttctcctggctacagtcctacttcgccgacctacagcctcaccagcccggccatc
agtccagatgacagcgatgaagacaactga
DBGET
integrated database retrieval system
