Gekko japonicus (Schlegel's Japanese gecko): 107120363
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Entry
107120363 CDS
T04299
Symbol
DDB1
Name
(RefSeq) damage specific DNA binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03420
Nucleotide excision repair
gja04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107120363 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
107120363 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gja04121
]
107120363 (DDB1)
03400 DNA repair and recombination proteins [BR:
gja03400
]
107120363 (DDB1)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
107120363 (DDB1)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107120363 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
107120363 (DDB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
107120363
NCBI-ProteinID:
XP_015278534
UniProt:
A0ABM1KXU7
LinkDB
All DBs
Position
Un
AA seq
1074 aa
AA seq
DB search
MPLMGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDP
ECRMIGLRLYDGLFKVIPLERENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQ
GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYL
AIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGGVSLKDLRVELLG
ETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVD
LERQGQGQLVTCSGAYKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHRETDNTLV
LSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKAL
VSEWKEPNGKNISVASCNSCQVVVAVGRVLYYLEIHPRELKQISCTEMEHEVACLDITPL
GDTSGMSPLCAIGLWTDISARILKLPSFDLLHKEMLGGEIIPRSILMTTFESSHYLLCAL
GDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKL
VFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICY
QEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEV
EVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPDEAEPKQG
RIVVFHYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHY
NNIMALYVKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFL
GAENAFNLFVCQKDSAATTDEERQHLQELGLFHLGEFVNVFCHGSLVMQNLGETSTPTQG
SVLFGTVNGMIGLVTSLSESWYNLLLDLQNRLNKVIKSVGKIEHSFWRSFHTERKTELAT
GFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcatgggggaaagcaaggatttgctcttcattctgacggcaaagtataatgct
tgcattcttgagtacaaacaaagtggggagagcattgatatcattacccgagcccatggg
aatgtgcaggatcgtattggtcgcccatcagaaacaggtataattggcataattgacccg
gaatgcaggatgattggattgcgactttatgatggccttttcaaggttatccctctggag
cgggaaaataaggaattaaaggcatttaacatccggctggaagagctgcaggtcatcgat
gtcaagttcctgtatgggtgccaggccccaaccatctgctttgtttaccaggatccacag
ggtcggcatgtcaagacttatgaagtgtctctgcgtgagaaggagtttaacaagggaccc
tggaaacaggagaatgtggaggctgaagcctctatggtaatcgcagtacctgagccattt
ggcggagcgatcatcataggacaagaatccatcacctatcacaatggggataaatacctg
gctatagcaccacccatcatcaagcaaagtacaatcgtatgtcataaccgggttgatcca
aatgggtctcgttaccttctgggtgacatggaaggccgcctcttcatgctgctgttggaa
aaagaggagctgatggacggtggcgtcagtctgaaggacttgcgtgtggaactgcttgga
gagacatccattgcagaatgcctgacttacctagacaatggtgttgtgttcgttggctct
cggcttggtgactcccagcttgtaaagctcaacgtggacagtaatgaacaaggctcatat
gtggtggccatggaaaccttcaccaacctcggccccatcgtggacatgtgcgtggtagat
cttgagaggcagggtcaagggcagctggttacatgctctggtgcctataaagagggctct
ctgaggatcatccggaatgggattggaattcatgaacatgccagcattgatcttccaggg
attaaaggattgtggcctctgcgatcagattcccaccgtgaaactgataacactttagtg
ctgtcctttgtgggccaaaccagggttctgatgttgaatggggaggaagtggaagaaact
gaattgacaggatttgtggatgatcaacaaactttcttttgtggcaatgtggcccatcag
caattaatccagatcacatcagcctcagtgcgcctcgtcagtcaggagcccaaggccctt
gtaagtgagtggaaagaacccaacgggaagaacatcagtgtggcttcctgtaacagctgt
caagtagtggtggctgtggggagagtgctctactatctagagatccaccctcgggaactg
aagcagataagctgcacagagatggagcatgaggtggcctgcctggacatcactcctttg
ggagacaccagtggcatgtcccctctgtgtgccattggcctctggactgacatctcagcg
cgcattcttaagctgccctcatttgacctgctgcacaaggagatgttaggaggagagatt
atcccacgttccattctgatgaccacctttgagagtagccattaccttctgtgtgccctg
ggggatggggcactcttctactttggactgaacattgagacaggtttgctgagtgatcgt
aagaaagtgactctgggaacccagcccactgttcttaggacattccgttccctttccacc
accaatgtgtttgcttgctctgaccgcccaactgtgatttacagcagcaatcacaagcta
gtcttctctaacgttaatcttaaggaggtgaactacatgtgtcctctcaactcagatggg
tatcctgacagcctggctttggccaacaacagcactttgacaatcggcaccattgacgag
attcagaagctgcatatccgcactgtccctctgtatgagtcacccaggaagatctgctat
caggaagtatctcagtgttttggagtgctctccagtcgcattgaggttcaggattccagt
ggaggtaccactgcgctgaggcccagtgcaagcacccaggccctttccagcagtgtgagc
tccagcaagttattctcaagcagcacagccccacatgagacatcgtttggtgaagaggta
gaggtgcacaacctgctcattatagatcagcacacgtttgaagtgcttcatgctcaccag
tttctgcagaatgagtacgcactaagcctggtctcttgcaaactgggcaaagaccccaac
acgtattttattgtgggcactgccatggtttatcctgatgaagcggaacccaagcaaggc
cggattgtggtgtttcattattctgatggcaaattgcagactgtagcagagaaagaagtg
aaaggagctgtttactccatggtggaattcaatggaaaactcctagccagcataaacagc
acggtgcggctgtatgagtggacagcagagaaagagcttcgcacggaatgcaatcattac
aacaatatcatggcactctatgtaaagaccaagggcgacttcatcttagtgggagatctg
atgcgctctgtccttttgcttgcctataagcccatggaaggcaactttgaagagattgct
cgagactttaatccaaattggatgagtgcagtagagattttggatgatgacaacttccta
ggggcagagaatgcgtttaacttgtttgtgtgtcagaaggacagtgcagccacaactgat
gaggaacgccagcatcttcaggagttggggctgttccatctgggcgagtttgtcaacgtc
ttttgtcatgggtccctggtcatgcagaatctgggtgaaacatccacaccgacacagggc
tcagtgctctttggtacagtcaatggaatgattggattggtgacttcactatcagaaagc
tggtataacctcctgcttgatctgcagaacagactcaacaaagtcatcaagagtgtggga
aaaattgaacattctttttggagatcatttcatacagaacgcaagacagagctagctact
ggttttattgatggagatttgattgaaagctttctagacatcagtcgacccaagatgcag
gaggtggtggctaacttacagatcgatgatggcagcgggatgaagagggaggccacagtg
gacgatctgattaagattgtggaggaactcacccgtatccactag
DBGET
integrated database retrieval system
