Gekko japonicus (Schlegel's Japanese gecko): 107120408
Help
Entry
107120408 CDS
T04299
Symbol
PRPF4
Name
(RefSeq) pre-mRNA processing factor 4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107120408 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gja03041
]
107120408 (PRPF4)
Spliceosome [BR:
gja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107120408 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD_LRWD1
WD40_like
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
107120408
NCBI-ProteinID:
XP_015278584
LinkDB
All DBs
Position
Un
AA seq
538 aa
AA seq
DB search
MAASRLTAASKSVSARKFPTLPERETGAKSKASDESDAPPAKKAPIFYGSLEEKERDRLS
KGESGMLSRDAVKAAIEAGNINITTGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTD
DSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQ
TWYHEGPNTLKTARLWIANYSLPRAMRRLEEARLLKDIPEATRTSQKQELHKSLRSLNNF
CSQIGDDRPISYCHFSPNSRLLATACWSGLCKLWSVPDCNLVHTLRGHNTSVGAIVFHPK
ATISLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHTMRVARVAWHPSGRFLGTTCYD
HSWRLWDLEAQEEILHQEGHSKGVYDIAFHVDGSLSGTGGLDAFGRVWDLRTGRCIMFLE
GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRKCIYTIPAHENLVTGVKFEPNHGNF
LLTGAYDNTAKVWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWMAE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcaaggctcaccgcagcgagcaaatctgtgtctgcgaggaagtttccaact
ctccctgaacgagaaactggtgcaaaaagtaaggcttcagatgagagtgatgcacctcct
gccaagaaggcccctattttttatggaagcctggaggagaaggaacgagatcgactctcc
aagggggagtcagggatgctgagcagggatgcggtcaaagctgcaattgaggctggcaat
atcaacatcacaactggtgaagtctttgacctggaagatcatatgagcgagcgccaggca
gaagtgctggcagagtttgaacgccggaaacgagccagacaaatcaacgtttccacggat
gactctgaagtcaaggcctgcctgcgagctctgggggagcccatcacgctttttggtgaa
ggccccgcagagaggagagaaaggttacgtaatattctctcagtggttggcacagatgcc
ttgaagaagaccaagaaagatgatgaaaaatctaagaaatcaaaagaagagtatcaacaa
acctggtaccatgaaggaccaaacaccctgaaaaccgccagactgtggattgccaactac
tccctccctcgggccatgaggcggctggaagaggcccggctgctgaaggacatccctgaa
gccacaaggacatctcagaaacaggagctgcacaaatctttgaggtctctgaataatttt
tgcagccaaattggggatgaccgtccaatctcatattgccacttcagtcctaactctaga
ctcctggctacagcctgctggagcggactttgcaagctgtggtctgtgcctgactgcaat
ctcgtccacacgttgagagggcataataccagtgttggggcaattgtcttccaccccaag
gcgaccatctccctggacaagaaggacgtgaacctggcatcatgtgcagctgatggctca
gtcaagctctggagcctcgaaagtgatgagccggtggctgacattgaggggcacacaatg
agagtggcacgggtggcgtggcacccctctggccggttcctgggcaccacttgctatgac
cactcgtggcgcttgtgggacttggaggcccaggaagaaattctgcaccaggagggacac
agcaaaggggtctacgatattgcattccatgttgatggctccctgtctggcactggcggc
ctggatgccttcggccgggtgtgggaccttcgcacgggacgctgcatcatgttcttggag
ggtcatctcaaggagatttacgggatcaacttttcgccaaatgggtaccacattgccacg
ggcagcggtgacaacacctgcaaagtgtgggatctgcgccagaggaaatgtatctacacc
atccccgctcacgagaacctagtgactggagtgaagtttgaacctaatcatggcaacttt
ctactcaccggtgcctacgacaacacagcgaaggtctggactcacccaggctggtcccct
ctgaaaaccctggctgggcatgagggcaaagtgatgggcttggatatctctctggacggc
cagctgattgccacatgctcttacgacaggaccttcaagctctggatggcggagtag
DBGET
integrated database retrieval system
