Gekko japonicus (Schlegel's Japanese gecko): 107120613
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Entry
107120613 CDS
T04299
Symbol
USP13
Name
(RefSeq) ubiquitin specific peptidase 13 (isopeptidase T-3)
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gja01002
]
107120613 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gja04121
]
107120613 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gja04147
]
107120613 (USP13)
Enzymes [BR:
gja01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107120613 (USP13)
Peptidases and inhibitors [BR:
gja01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107120613 (USP13)
Ubiquitin system [BR:
gja04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107120613 (USP13)
Exosome [BR:
gja04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107120613 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_3
UBA_9
UBA_4
Motif
Other DBs
NCBI-GeneID:
107120613
NCBI-ProteinID:
XP_015278830
LinkDB
All DBs
Position
Un
AA seq
813 aa
AA seq
DB search
MERAALFGNGRETPMAAGDVGELLIPYMPTIRVPKTGDRVYKTECAFSYDSPYSEGGLYV
CMKTFLGFGREHVERHYRKTGQCVFMHLKRHTREKVTGASGGALPKRRNTKLFLDLESNG
DLNNDDYEYEDEAKLVIFPDHYEIPLPNIEELPALVTIACDAVLSSKSPYRKQDPDSWEE
EPQVSKHANSLVQMDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGH
ALEHYKEMGYPLAVKLGTITPDGAGVYSFDEEEPVLDPHIAKHLGHFGIDMLQMQATENS
LRDNDMKPRVSEWEVIQESGMKLKPMYGPGYTGMKNVGNSCYISSIMQAIFSIPEFQRAY
VGNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQHNGI
SPRMFKAFVSKGHPEFSSSRQQDAQEFFLHLMNLIEVSKDELIAYELKRREAESARRPPP
ELVRARIPFRACLQGFSEPENVADFWSSALQAKSAGVKTSRFASFPEYLIVQIKKFTFGL
DWIPKKLDVSIDVPDLLDISHLRATGLQPGEEELPDISPPIIIPDDPKDGMMNHFMDPPD
IDESSVMQLAEMGFPLEACRKAVYYTGNMGAEVAFNWIIAHMEEPDFAEPLAIPGYGAAA
YPGLGDPGALGLNNQPPEEMVAIIVSMGFQRNVAIQALRAMNNNLEHAIDWIFSHPDPEG
NETTSEAMDMENHVNANILAESAPEGPRIKDGSGRYELFGFVSHMGTSTMSGHYVCHLKK
EGRWAIYNDLKVCASERPPKELGYIYFYRRIPR
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggccgcgctcttcgggaacggccgggagacgccgatggctgcgggggacgtg
ggcgagctcctgatcccttacatgcccaccatccgggtgcccaagaccggcgaccgcgtc
tacaagaccgagtgcgccttctcctacgactcgccgtattctgaaggaggtctctatgtg
tgcatgaagactttcctgggatttggaagggaacatgtggaaaggcattaccggaagacg
ggacagtgcgtgttcatgcacttgaagcggcacacgagagagaaggtaacaggggcatct
ggtggagctttaccaaaaaggagaaacaccaagctatttttagatctcgaatccaacggc
gatttaaacaacgacgattacgaatacgaggatgaagccaaacttgtcatattccccgat
cactatgagatccctttgcccaatatagaagagttacctgcactggtcaccatagcttgc
gatgcggtcctcagttcaaaatctccttatcgaaagcaagatcccgactcctgggaggaa
gagccgcaagtttccaaacacgccaatagtcttgtacagatggataatggagtcaggatt
ccaccaagtggctggaaatgctcgaagtgtgacttgcgggagaacctttggctgaacctg
acggatgggtcagtactatgtggaaagtggttctttgatggcagcgggggaaatggacat
gccctggaacactataaggagatgggctatcccttagcggtgaagctcggaacgattact
ccagatggtgcaggcgtctattcctttgatgaagaggagccagtgttggacccacacata
gctaaacacttggggcattttgggattgatatgctgcagatgcaggcgacagagaacagc
ctgagggacaatgacatgaagcccagggtctctgaatgggaagtgatccaggaatctggt
atgaagctgaagccgatgtatggcccaggctacactggcatgaaaaatgtgggcaacagc
tgttacatcagcagcatcatgcaggccattttcagcatccccgaatttcagagagcgtac
gtgggaaaccttccaaggatatttgactattcccctctggacccaacccaagattttaat
acacagatggctaaattgggacacggcctcctctcagggcagtactccaaaccacctgtc
aaatccgaactcatcgaacaggtgatgaaagaagaacacaagcctcagcacaacggcatt
tccccgcgcatgttcaaagcttttgtaagcaaagggcacccagaattctcttccagtcgg
caacaagacgcacaggagtttttcctgcaccttatgaatttaatagaggtgagcaaagat
gaactgatcgcctacgagctgaagaggagagaagcagaatcggccaggaggccacctccg
gagctcgttcgtgcccggatcccgttccgtgcctgtttgcagggtttttcagaaccagag
aatgtagcagacttctggagcagtgcccttcaggccaagtctgccggagttaaaacctct
cgcttcgcatcatttcctgagtacctcatagtacagataaagaaattcacttttggcctt
gactggatacccaaaaagcttgatgtttccatagacgtgccagatcttctggacatcagt
cacctccgcgccactggcctgcagccaggagaggaggaacttccagacatctctccgccc
attatcattcctgatgaccccaaagatggcatgatgaaccatttcatggaccctccagac
attgacgaatcttcggtcatgcagctagcagaaatgggttttccgcttgaagcgtgtcgg
aaggccgtctactacaccggcaacatgggcgctgaggtggctttcaactggatcattgcc
cacatggaagaaccagattttgcagagccattagccattcccggctacggagcagctgct
tatccggggttaggggatccgggggctcttgggctgaataaccagcctccagaagagatg
gtggccatcattgtctccatgggtttccagcggaatgttgctatccaggcattacgggca
atgaataataatttggagcatgcaatagactggatcttcagtcacccagatcccgaaggg
aacgaaaccacttctgaggctatggacatggagaaccacgtgaatgccaacatccttgca
gaatccgctccggaggggcccaggatcaaagatgggtctggacgatatgagctcttcggg
ttcgtcagtcacatgggaacatcaacaatgagtggccactatgtttgccatctcaaaaag
gagggaagatgggcgatctacaatgacctgaaagtctgtgcctccgagcgaccacccaaa
gagctgggctatatctacttctatcgcaggataccacgttag
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