Gekko japonicus (Schlegel's Japanese gecko): 107120742
Help
Entry
107120742 CDS
T04299
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04382
Cornified envelope formation
gja04510
Focal adhesion
gja04512
ECM-receptor interaction
gja04518
Integrin signaling
gja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107120742
04518 Integrin signaling
107120742
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107120742
09142 Cell motility
04820 Cytoskeleton in muscle cells
107120742
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107120742
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gja04147
]
107120742
00536 Glycosaminoglycan binding proteins [BR:
gja00536
]
107120742
Exosome [BR:
gja04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107120742
Glycosaminoglycan binding proteins [BR:
gja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107120742
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107120742
NCBI-ProteinID:
XP_015278999
UniProt:
A0ABM1KZ62
LinkDB
All DBs
Position
Un
AA seq
1491 aa
AA seq
DB search
GERGLQGLHGLVGFPGVQGPEGPPGAPGLKGDTGEPGLPGTKGTRGDPGEIIGQLPGGVI
KGEKGFLGQPGLPGVAGPPGIPGPLGPPGPQGRPGPPGPPGLQGEKGHMGLSFQGPKGEK
GERGVMGPPGPQGGTPQQQEKGTIAIQGDKGDPGEKGDPGFPGLSGTPGFPGLPGVDGPK
GDKGIVGPPGPPGVVIGRDEVELFGEKGDPGPPGIPGQKGESGYKGPPSPGVTGAPGFPG
ERGEKGDRGSPGLSLFGSKGRDGFQGPPGPPGPPGPPGIIDEILGCQPGPPGDTGPPGTP
GQHGFSGERGEKGERGESCVSCDVPILPGPPGPQGFPGEPGVPGPPGAKGDRGNPGHEKX
PGVTGPPGTPGLTGSPGAKGEPGDVFFDSDLKGDKGSPGFPGSPGTPGQDGRPGRDGVPG
IPGPKGASGTIGLKGDRGPPGTSGFPGPRGDRGFPGSPGTGQPGQPGSKGEKGISGFPGS
SGLPGPKGENGQAVFLHGAPGTAGVPGPPGLPGVQGDKGDAGIPGRPGLPGEKGVRGPQG
IGFPGAPGPPGFPGQPGSPGPAGEKGDIGPSGLPGAAGSQGPKGDAGVGLPGQKGFPGPK
GRDGFPGPKGDQGLPGLIGEKGFPGVPGQPGPQGDPGPSGLPGLQGSPGVPGIGPPGPPG
PAGQTGLPGPIGSPGTKGEKGYTGVPGRDMPGLKGDKGSQGQSGLPGLQGLPGLPGPQGK
EGQPGFPGLKGEMGVMGTPGIQGPPGPLGSPGLPGEKGDAGFPGVPGLRGGPGFKGEKGE
AGLPGEPGKMDHVDMESMKGQKGDQGDRGQPGVIGEKGLQGDPGTTGVPGKDGDPGLPGQ
PGHSGEKGVQGLPGDPGTPGFPGQKGVKGEKGDAGFPGIGIPGTPGEKGEQGRPGVPGLP
GERGEKGILGLPGTPGFPGSKGQQGLPGVPGIPGTPGEKGEKGLPGLAGSPGLKGQTGDI
GRQGFPGTPGEKGQAGYDGIPGSPGVKGDAGLPGRGLPGLPGEKGEKGTKGDLGFPGAPG
SPGIPGGKGEPGFGGPQGPQGQPGIPGLPGRVTEGPKGDRGPQGRPGIQGQPGPPGSPGV
PGLSGEKGEKGTPGWPGTTGRAGAKGDPGAQGLTGNAGFPGSDGAKGDMGPPGIPGPPGP
KGSSGFSGLKGEQGDQGTPGAKGFPGPPGPPGPAQLLKGEPGLPGPQGPVGPKGFSGPPG
PKGQQGVTGSVGVPGPPGIPGFDGSPGQKGESGPAGPTGPRGFPGPPGPEGVPGPMGAPG
APSVAHGFLVTRHSQTTEEPQCPPGTRVMYFGYSLLYVQGNERAHGQDLGTAGSCLRKFS
TMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPVTGESIQPFISRCSVCEAPAMVM
AVHSQTVQIPPCPDGWRSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHG
KGTCNYYANAYSFWLATIERNEMFKKPNPSTLKAGELRSNISRCQVCMRRT
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
ggtgaaagaggcttgcaaggtctacacggtttggtggggtttcctggagtacaagggcct
gaagggccaccaggggccccaggactgaagggtgacaccggagaaccaggactgccagga
acaaaaggaaccaggggagacccaggagaaattatcgggcaactacctggcggtgtaata
aaaggtgaaaaaggatttcttggccaacctggattaccgggagtagctggacccccagga
attccaggcccccttggaccacctggaccccaaggaagaccaggtcctccagggccacct
ggtttacagggggagaagggccatatgggcttaagtttccaaggaccaaaaggcgaaaag
ggtgaacggggagtcatgggccccccaggtcctcaaggaggtaccccgcaacagcaagaa
aaagggaccatagccatacaaggcgacaaaggcgatccaggcgaaaagggagatcctggc
ttcccaggactgagtggcacgccgggatttccaggactgcctggtgtagatggccctaag
ggagataagggtatagttggtcctccaggccctccaggagttgttattggtagagacgaa
gtggaactctttggggagaagggagatccgggccctccaggaattccaggacaaaaaggg
gaatccggctacaaaggaccacccagcccaggggtaacaggggctcccgggtttcctggc
gagagaggagaaaagggggaccggggctcccctggactgtctctgtttggatcgaaagga
agagatggattccaaggccctcctggtccaccagggcctccaggcccccctggcatcata
gatgaaattcttggatgtcagcctggccctcctggcgacactggtcctccgggcactcct
ggccaacacggtttctcaggagaaaggggagagaaaggtgaaagaggcgaaagctgtgtc
tcctgtgatgtgccaatacttcctggaccacctggtccccaaggtttcccaggggaaccc
ggcgttccaggccccccgggtgccaaaggggacaggggcaatcctgggcacgaaaaanaa
cctggagtgacgggtcctcctggtacacctggattaactggaagccctggagctaaagga
gaacccggagatgttttctttgactctgatttaaagggtgacaaaggaagccctggtttt
cctgggtctccaggcactcctggccaagatggacggcccgggcgggatggtgtgccgggt
attccaggtcctaaaggtgcttcgggaacaattggcttaaaaggcgaccgtggccctcca
ggaacaagtggatttccaggaccccgtggagacaggggctttcctggtagccccggaaca
gggcaacctgggcaacctggtagtaaaggggaaaagggtatttcagggttccccggctct
tcagggcttccagggcccaaaggtgaaaatgggcaggccgttttcttgcacggtgctccg
gggacagccggtgttcctgggcctcctggtctgccaggcgtccaaggtgacaaaggagat
gcagggatccccggaagacctggcctgccaggtgaaaaaggagtaagaggcccacaagga
ataggctttcccggtgctccaggacctccaggtttcccagggcagcccggctcacctggt
ccagctggggagaaaggcgatattggtccaagcgggttacctggcgcagcagggtcgcaa
ggccccaaaggtgacgccggagtaggcctcccgggtcagaaagggtttcctggcccaaaa
ggacgagatggctttcctggaccaaaaggggatcaagggctgcctggtttgataggagaa
aaaggattcccaggtgtgcctggacaaccaggtccccaaggtgaccccgggccttctgga
ttaccaggtctacagggatctcccggtgtgccaggaataggtcccccaggcccccctggt
ccagcaggacaaactgggcttccaggaccaattggatctccaggaacgaaaggagagaag
ggttacaccggtgtccccgggcgagacatgccagggctaaaaggggataaaggtagccag
ggacaatctgggctgccaggcttgcaaggactgccgggcttacctggcccacaaggaaaa
gaagggcagccgggttttccaggactcaaaggagaaatgggagtgatgggaacccctggg
atccagggtcctcctggccctctaggatctcctggacttcctggtgaaaaaggtgacgct
ggttttcccggagtgccaggactcagaggtggccctggtttcaagggtgaaaaaggtgag
gccggtctgccaggagagccaggaaaaatggaccacgtggacatggagagcatgaaaggg
cagaaaggagatcaaggagacagaggtcagccaggagtcatcggagagaaggggcttcaa
ggagatcctggcacaacaggcgtgccagggaaggacggggatcccggtttacctggccaa
ccagggcactcaggagaaaagggtgtgcaaggtcttccaggtgatccgggcacaccaggg
tttccgggacagaaaggtgtgaaaggggagaaaggagatgctggatttcctggaattggc
atccctgggacccctggtgaaaagggagaacaaggaaggccaggtgttccaggcctacct
ggggagagaggtgaaaagggtatcctaggacttccaggtactcctggtttcccaggttcc
aaagggcagcaaggtcttccaggtgttcccggtattccaggaacaccaggagaaaagggt
gaaaaggggttgccaggcttggctggatctccgggcttaaaaggtcaaacaggtgacatt
gggcgccagggttttcctgggacccctggagaaaaaggacaggctggctatgatggcatc
ccaggctcccctggtgtaaagggtgacgcaggtcttccaggcagaggacttcctggtctc
ccaggtgaaaaaggagagaaaggtacaaaaggagacttgggcttcccgggagccccagga
agtccggggattcctggtggaaaaggggaaccaggatttgggggtccgcagggtccccaa
ggccagccgggcattcccggattaccgggcagagtcacggaaggacctaagggagaccgg
gggcctcaaggtcgaccggggattcaagggcaacctggaccacctggatctccgggagtt
cctggactgtcaggggaaaaaggagaaaagggaaccccaggttggccggggacaacagga
agggcaggagccaaaggtgacccaggagctcaaggactcaccggaaatgctggctttcct
ggatctgatggtgcaaaaggtgacatgggaccccccggaattccaggccctccaggtcca
aaaggttcttcgggcttctccggactcaaaggtgaacaaggagatcaagggactcctggt
gctaaaggtttcccgggcccaccaggtcctccgggtcccgctcagcttctgaaaggagaa
ccgggtttaccaggtcctcaaggtccagttgggcccaaaggatttagtggtcctccaggc
ccaaaagggcaacaaggtgtaacaggatccgtgggggtgcctggtccccccgggatccca
ggatttgatggcagccccggtcagaaaggagaatctggtcctgctggccccacaggcccc
agaggttttcctggtccacctggcccagaaggcgtgccggggccgatgggtgcaccaggc
gctccttccgtagctcacggcttccttgtgactcggcacagccaaaccacagaagagccc
cagtgtccgcctggaacaagagtcatgtactttgggtattccttgctttatgtgcaaggg
aatgaacgtgcacatggccaggacctgggcacggccggcagctgtctccgcaaattcagc
accatgcctttcctgttctgtaacattaacaacgtgtgcaattttgcctcccggaacgat
tattcctactggctctccaccccagagccaatgccgatgagcatggctcccgtgacgggg
gagagtatccagcctttcatcagcagatgttctgtgtgcgaagctccagcaatggtgatg
gcagttcacagccagacggtccaaatcccgccctgtccagacggctggagatctctctgg
atcggctactcctttgtgatgcacacgagcgctggggcagagggctcggggcaagccctg
gcatctcctggctcctgtttggaagagttccgcagcgcgcccttcattgaatgccacggg
aagggaacctgcaactattatgcaaacgcttacagcttttggctcgccacaattgagagg
aacgaaatgttcaagaaaccaaatccctccactctgaaagctggggagctccgttcaaac
attagccgctgccaagtttgtatgaggagaacataa
DBGET
integrated database retrieval system
